feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score matK gene matK matK 1457 2689 -1 1233 LSC 0.011354 14 0 4 93 no 1.000000 2 1.000000 NA 1.000000 50.600000 IGS_001 igs matK|rps16 matK-rps16 2690 3647 0 958 LSC 0.015690 15 2 24 123 no 1.000000 2 1.000000 NA 0.997912 54.800000 rps16 gene rps16 rps16 3648 4711 -1 1064 LSC 0.010417 11 8 121 83 no 1.000000 2 1.000000 NA 0.992481 56.700000 IGS_002 igs rps16|chlB rps16-chlB 4712 4870 0 159 LSC 0.006289 1 0 67 121 no 1.000000 2 1.000000 NA 1.000000 46.100000 chlB gene chlB chlB 4871 5734 -1 864 LSC 0.006944 6 0 75 300 no 1.000000 2 1.000000 NA 1.000000 53.400000 IGS_003 igs chlB|trnQ-UUG chlB-trnQ-UUG 5735 6650 0 916 LSC 0.007684 7 5 29 91 no 1.000000 2 1.000000 NA 0.994541 50.900000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 6651 6722 -1 72 LSC 0.000000 0 0 54 19 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_004 igs trnQ-UUG|psbK trnQ-UUG-psbK 6723 7048 0 326 LSC 0.012270 4 0 126 236 no 1.000000 2 1.000000 NA 1.000000 54.500000 psbK gene psbK psbK 7049 7225 1 177 LSC 0.000000 0 0 174 59 no 0.000000 1 0.000000 NA 1.000000 23.200000 IGS_005 igs psbK|psbI psbK-psbI 7226 7759 0 534 LSC 0.016854 9 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 67.100000 psbI gene psbI psbI 7760 7870 1 111 LSC 0.000000 0 0 25 206 no 0.000000 1 0.000000 NA 1.000000 20.600000 IGS_006 igs psbI|trnS-GCU psbI-trnS-GCU 7871 7943 0 73 LSC 0.000000 0 0 136 133 no 0.000000 1 0.000000 NA 1.000000 28.700000 trnS-GCU tRNA trnS-GCU trnS-GCU 7944 8031 -1 88 LSC 0.000000 0 0 209 45 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_007 igs trnS-GCU|ycf12 trnS-GCU-ycf12 8032 8565 0 534 LSC 0.007491 4 0 297 56 no 1.000000 2 1.000000 NA 1.000000 50.900000 ycf12 gene ycf12 ycf12 8566 8667 1 102 LSC 0.009804 1 0 63 139 no 1.000000 2 1.000000 NA 1.000000 47.900000 IGS_008 igs ycf12|trnG-UCC ycf12-trnG-UCC 8668 8844 0 177 LSC 0.011299 2 0 45 64 no 1.000000 2 1.000000 NA 1.000000 47.400000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 8845 8867 1 23 LSC 0.000000 0 0 28 41 no 0.000000 1 0.000000 NA 1.000000 20.900000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 9788 9835 1 48 LSC 0.000000 0 0 17 30 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_011 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 9836 9992 0 157 LSC 0.031847 5 0 65 300 no 1.000000 2 1.000000 NA 1.000000 60.700000 trnR-UCU tRNA trnR-UCU trnR-UCU 9993 10064 1 72 LSC 0.000000 0 0 1 300 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_012 igs trnR-UCU|atpF trnR-UCU-atpF 10065 11766 0 1702 LSC 0.007638 13 0 73 5 no 1.000000 2 1.000000 NA 1.000000 48.100000 atpF gene atpF atpF 11767 13141 -1 1375 LSC 0.011636 16 0 30 19 no 1.000000 2 1.000000 NA 1.000000 51.900000 IGS_013 igs atpF|atpH atpF-atpH 13142 13328 0 187 LSC 0.021390 4 0 72 277 no 1.000000 2 1.000000 NA 1.000000 55.200000 atpH gene atpH atpH 13329 13565 -1 237 LSC 0.000000 0 0 62 40 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_014 igs atpH|atpI atpH-atpI 13566 14319 0 754 LSC 0.011968 9 2 299 195 yes 1.000000 2 1.000000 NA 0.997347 65.500000 atpI gene atpI atpI 14320 14808 -1 489 LSC 0.008180 4 0 300 108 no 1.000000 2 1.000000 NA 1.000000 54.200000 IGS_015 igs atpI|rpoC2 atpI-rpoC2 14809 16143 0 1335 LSC 0.010487 14 0 77 2 no 1.000000 2 1.000000 NA 1.000000 49.900000 rpoC2 gene rpoC2 rpoC2 16144 20046 -1 3903 LSC 0.006415 25 6 27 271 no 1.000000 2 1.000000 NA 0.998463 45.100000 IGS_016 igs rpoC2|trnD-GUC rpoC2-trnD-GUC 20047 27356 0 7310 LSC 0.007253 53 3 300 86 yes 1.000000 2 1.000000 NA 0.999590 48.200000 trnD-GUC tRNA trnD-GUC trnD-GUC 27357 27430 1 74 LSC 0.000000 0 0 40 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_017 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 27431 27487 0 57 LSC 0.052632 3 0 114 94 yes 1.000000 2 1.000000 NA 1.000000 73.600000 trnY-GUA tRNA trnY-GUA trnY-GUA 27488 27569 -1 82 LSC 0.000000 0 0 14 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_018 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 27570 27709 0 140 LSC 0.021429 3 0 96 123 no 1.000000 2 1.000000 NA 1.000000 57.000000 trnE-UUC tRNA trnE-UUC trnE-UUC 27710 27782 -1 73 LSC 0.000000 0 0 104 50 no 0.000000 1 0.000000 NA 1.000000 22.500000 IGS_019 igs trnE-UUC|psbM trnE-UUC-psbM 27783 28219 0 437 LSC 0.009153 4 0 177 162 no 1.000000 2 1.000000 NA 1.000000 57.800000 psbM gene psbM psbM 28220 28333 1 114 LSC 0.000000 0 0 250 48 no 0.000000 1 0.000000 NA 1.000000 22.400000 IGS_020 igs psbM|petN psbM-petN 28334 29204 0 871 LSC 0.016073 14 0 300 233 yes 1.000000 2 1.000000 NA 1.000000 68.000000 petN gene petN petN 29205 29321 -1 117 LSC 0.000000 0 0 34 116 no 0.000000 1 0.000000 NA 1.000000 21.300000 IGS_021 igs petN|trnC-GCA petN-trnC-GCA 29322 29769 0 448 LSC 0.017857 8 0 151 102 no 1.000000 2 1.000000 NA 1.000000 58.500000 trnC-GCA tRNA trnC-GCA trnC-GCA 29770 29841 -1 72 LSC 0.000000 0 0 34 30 no 0.000000 1 0.000000 NA 1.000000 21.000000 IGS_022 igs trnC-GCA|trnG-GCC trnC-GCA-trnG-GCC 29842 30288 0 447 LSC 0.024831 11 4 106 101 yes 1.000000 2 1.000000 NA 0.991051 63.300000 trnG-GCC tRNA trnG-GCC trnG-GCC 30289 30359 -1 71 LSC 0.000000 0 0 72 30 no 0.000000 1 0.000000 NA 1.000000 21.000000 IGS_023 igs trnG-GCC|psbZ trnG-GCC-psbZ 30360 30622 0 263 LSC 0.031128 8 6 143 137 yes 1.000000 2 1.000000 NA 0.977186 67.800000 psbZ gene psbZ psbZ 30623 30811 -1 189 LSC 0.005291 1 0 64 187 no 1.000000 2 1.000000 NA 1.000000 45.300000 IGS_024 igs psbZ|trnS-UGA psbZ-trnS-UGA 30812 31253 0 442 LSC 0.020737 9 8 51 92 no 1.000000 2 1.000000 NA 0.981900 57.900000 trnS-UGA tRNA trnS-UGA trnS-UGA 31254 31342 1 89 LSC 0.000000 0 0 4 3 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_025 igs trnS-UGA|psbC trnS-UGA-psbC 31343 31640 0 298 LSC 0.034602 10 9 93 300 yes 1.000000 2 1.000000 NA 0.969799 67.200000 psbC gene psbC psbC 31641 33092 -1 1452 LSC 0.005510 8 0 138 22 no 1.000000 2 1.000000 NA 1.000000 48.600000 psbD gene psbD psbD 33010 34071 -1 1062 LSC 0.006591 7 0 171 72 no 1.000000 2 1.000000 NA 1.000000 52.900000 IGS_027 igs psbD|trnT-GGU psbD-trnT-GGU 34072 35379 0 1308 LSC 0.013997 18 22 222 74 no 1.000000 2 1.000000 NA 0.983180 58.900000 trnT-GGU tRNA trnT-GGU trnT-GGU 35380 35451 -1 72 LSC 0.000000 0 0 30 2 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_028 igs trnT-GGU|trnfM-CAU trnT-GGU-trnfM-CAU 35452 35944 0 493 LSC 0.016227 8 0 102 149 no 1.000000 2 1.000000 NA 1.000000 58.500000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 35945 36018 -1 74 LSC 0.000000 0 0 39 75 no 0.000000 1 0.000000 NA 1.000000 21.700000 IGS_029 igs trnfM-CAU|rps14 trnfM-CAU-rps14 36019 36142 0 124 LSC 0.008065 1 0 113 214 no 1.000000 2 1.000000 NA 1.000000 50.600000 rps14 gene rps14 rps14 36143 36445 -1 303 LSC 0.006601 2 0 48 61 no 1.000000 2 1.000000 NA 1.000000 45.000000 IGS_030 igs rps14|psaB rps14-psaB 36446 36662 0 217 LSC 0.027650 6 0 8 102 no 1.000000 2 1.000000 NA 1.000000 54.000000 psaB gene psaB psaB 36663 38879 -1 2217 LSC 0.006315 14 0 33 300 no 1.000000 2 1.000000 NA 1.000000 48.400000 IGS_031 igs psaB|psaA psaB-psaA 38880 38892 0 13 LSC 0.000000 0 0 200 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 38893 41145 -1 2253 LSC 0.005770 13 0 213 96 no 1.000000 2 1.000000 NA 1.000000 52.700000 IGS_032 igs psaA|trnS-GGA psaA-trnS-GGA 41146 43650 0 2505 LSC 0.010379 26 0 73 192 no 1.000000 2 1.000000 NA 1.000000 53.100000 trnS-GGA tRNA trnS-GGA trnS-GGA 43651 43737 1 87 LSC 0.000000 0 0 11 105 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_033 igs trnS-GGA|trnL-UAA trnS-GGA-trnL-UAA 43738 45480 0 1743 LSC 0.014360 25 2 98 51 yes 1.000000 2 1.000000 NA 0.998853 55.400000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 45481 45514 1 34 LSC 0.000000 0 0 22 17 no 0.000000 1 0.000000 NA 1.000000 20.000000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 46080 46130 1 51 LSC 0.000000 0 0 3 13 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_036 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 46131 46447 0 317 LSC 0.018927 6 0 54 97 no 1.000000 2 1.000000 NA 1.000000 52.800000 trnF-GAA tRNA trnF-GAA trnF-GAA 46448 46520 1 73 LSC 0.000000 0 0 73 24 no 0.000000 1 0.000000 NA 1.000000 20.600000 IGS_037 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 46521 46747 0 227 LSC 0.026432 6 0 146 300 yes 1.000000 2 1.000000 NA 1.000000 63.600000 ndhJ gene ndhJ ndhJ 46748 47260 -1 513 LSC 0.001949 1 0 62 0 no 1.000000 2 1.000000 NA 1.000000 43.100000 IGS_038 igs ndhJ|ndhK ndhJ-ndhK 47261 47330 0 70 LSC 0.028571 2 0 116 280 no 1.000000 2 1.000000 NA 1.000000 62.600000 ndhK gene ndhK ndhK 47331 48068 -1 738 LSC 0.005420 4 0 38 300 no 1.000000 2 1.000000 NA 1.000000 49.700000 ndhC gene ndhC ndhC 48005 48421 -1 417 LSC 0.004796 2 0 94 47 no 1.000000 2 1.000000 NA 1.000000 46.200000 IGS_040 igs ndhC|trnV-UAC ndhC-trnV-UAC 48422 48923 0 502 LSC 0.008000 4 2 300 80 no 1.000000 2 1.000000 NA 0.996016 52.700000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 48924 48963 -1 40 LSC 0.000000 0 0 128 40 no 0.000000 1 0.000000 NA 1.000000 21.800000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 49620 49657 -1 38 LSC 0.000000 0 0 14 13 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_043 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 49658 49931 0 274 LSC 0.021898 6 0 52 191 no 1.000000 2 1.000000 NA 1.000000 54.000000 trnM-CAU tRNA trnM-CAU trnM-CAU 49932 50004 1 73 LSC 0.000000 0 0 150 118 no 0.000000 1 0.000000 NA 1.000000 27.600000 IGS_044 igs trnM-CAU|atpE trnM-CAU-atpE 50005 50149 0 145 LSC 0.020690 3 0 223 300 yes 1.000000 2 1.000000 NA 1.000000 64.400000 atpE gene atpE atpE 50150 50548 -1 399 LSC 0.000000 0 0 1 30 no 0.000000 1 0.000000 NA 1.000000 20.900000 IGS_045 igs atpE|atpB atpE-atpB 50549 50553 0 5 LSC 0.000000 0 0 300 25 no 0.000000 1 0.000000 NA 1.000000 20.600000 atpB gene atpB atpB 50554 52035 -1 1482 LSC 0.004723 7 0 300 132 no 1.000000 2 1.000000 NA 1.000000 56.400000 IGS_046 igs atpB|rbcL atpB-rbcL 52036 52680 0 645 LSC 0.007752 5 0 300 52 no 1.000000 2 1.000000 NA 1.000000 52.100000 rbcL gene rbcL rbcL 52681 54108 1 1428 LSC 0.006303 9 0 89 230 no 1.000000 2 1.000000 NA 1.000000 54.000000 IGS_047 igs rbcL|trnR-UCG rbcL-trnR-UCG 54109 54229 0 121 LSC 0.000000 0 0 14 109 no 0.000000 1 0.000000 NA 1.000000 19.800000 trnR-UCG tRNA trnR-UCG trnR-UCG 54230 54310 1 81 LSC 0.000000 0 0 135 28 no 0.000000 1 0.000000 NA 1.000000 20.900000 IGS_048 igs trnR-UCG|accD trnR-UCG-accD 54311 54655 0 345 LSC 0.017391 6 0 216 300 no 1.000000 2 1.000000 NA 1.000000 63.400000 accD gene accD accD 54656 55426 1 771 LSC 0.000000 0 0 105 14 no 0.000000 1 0.000000 NA 1.000000 26.100000 IGS_049 igs accD|psaI accD-psaI 55427 55915 0 489 LSC 0.012270 6 0 300 162 no 1.000000 2 1.000000 NA 1.000000 60.600000 psaI gene psaI psaI 55916 56026 1 111 LSC 0.000000 0 0 166 51 no 0.000000 1 0.000000 NA 1.000000 22.600000 IGS_050 igs psaI|ycf4 psaI-ycf4 56027 56449 0 423 LSC 0.011820 5 0 277 44 no 1.000000 2 1.000000 NA 1.000000 50.200000 ycf4 gene ycf4 ycf4 56450 57004 1 555 LSC 0.007207 4 0 39 33 no 1.000000 2 1.000000 NA 1.000000 49.400000 IGS_051 igs ycf4|cemA ycf4-cemA 57005 57187 0 183 LSC 0.038251 7 0 69 116 yes 1.000000 2 1.000000 NA 1.000000 64.700000 cemA gene cemA cemA 57188 58696 1 1509 LSC 0.007290 11 0 27 79 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_052 igs cemA|psbJ cemA-psbJ 58697 60735 0 2039 LSC 0.010299 21 0 295 300 no 1.000000 2 1.000000 NA 1.000000 63.500000 psbJ gene psbJ psbJ 60736 60861 -1 126 LSC 0.000000 0 0 102 195 no 0.000000 1 0.000000 NA 1.000000 26.400000 IGS_053 igs psbJ|psbL psbJ-psbL 60862 60977 0 116 LSC 0.000000 0 0 228 79 no 0.000000 1 0.000000 NA 1.000000 24.700000 psbL gene psbL psbL 60978 61109 -1 132 LSC 0.007576 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.900000 IGS_054 igs psbL|psbF psbL-psbF 61110 61115 0 6 LSC 0.000000 0 0 52 300 no 0.000000 1 0.000000 NA 1.000000 22.700000 psbF gene psbF psbF 61116 61235 -1 120 LSC 0.000000 0 0 58 181 no 0.000000 1 0.000000 NA 1.000000 23.100000 IGS_055 igs psbF|petL psbF-petL 61236 62235 0 1000 LSC 0.005005 5 1 178 34 no 1.000000 2 1.000000 NA 0.999000 49.300000 petL gene petL petL 62236 62331 1 96 LSC 0.010417 1 0 149 28 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_056 igs petL|petG petL-petG 62332 62506 0 175 LSC 0.005714 1 0 61 37 no 1.000000 2 1.000000 NA 1.000000 43.600000 petG gene petG petG 62507 62623 1 117 LSC 0.008547 1 0 146 35 no 1.000000 2 1.000000 NA 1.000000 45.000000 IGS_057 igs petG|trnW-CCA petG-trnW-CCA 62624 62893 0 270 LSC 0.018519 5 0 79 114 no 1.000000 2 1.000000 NA 1.000000 54.100000 trnW-CCA tRNA trnW-CCA trnW-CCA 62894 62967 -1 74 LSC 0.000000 0 0 47 40 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_058 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 62968 63132 0 165 LSC 0.012121 2 0 121 76 no 1.000000 2 1.000000 NA 1.000000 50.200000 trnP-UGG tRNA trnP-UGG trnP-UGG 63133 63206 -1 74 LSC 0.000000 0 0 56 2 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_059 igs trnP-UGG|psaJ trnP-UGG-psaJ 63207 63562 0 356 LSC 0.016997 6 3 130 123 no 1.000000 2 1.000000 NA 0.991573 58.500000 psaJ gene psaJ psaJ 63563 63691 1 129 LSC 0.007752 1 0 35 25 no 1.000000 2 1.000000 NA 1.000000 43.800000 IGS_060 igs psaJ|rpl33 psaJ-rpl33 63692 63920 0 229 LSC 0.021834 5 0 5 57 no 1.000000 2 1.000000 NA 1.000000 50.400000 rpl33 gene rpl33 rpl33 63921 64121 1 201 LSC 0.009950 2 0 124 37 no 1.000000 2 1.000000 NA 1.000000 46.000000 IGS_061 igs rpl33|rps18 rpl33-rps18 64122 64182 0 61 LSC 0.016393 1 0 142 14 no 1.000000 2 1.000000 NA 1.000000 48.000000 rps18 gene rps18 rps18 64183 64320 1 138 LSC 0.021739 3 0 23 40 no 1.000000 2 1.000000 NA 1.000000 51.700000 IGS_062 igs rps18|rpl20 rps18-rpl20 64321 64646 0 326 LSC 0.018519 6 2 72 89 no 1.000000 2 1.000000 NA 0.993865 54.700000 rpl20 gene rpl20 rpl20 64647 65030 -1 384 LSC 0.005208 2 0 7 61 no 1.000000 2 1.000000 NA 1.000000 42.800000 IGS_063 igs rpl20|rps12 rpl20-rps12 65031 65981 0 951 LSC 0.010515 10 0 204 99 no 1.000000 2 1.000000 NA 1.000000 57.200000 rps12_part1 gene rps12 rps12 65982 66095 -1 114 LSC 0.008772 1 0 282 93 no 1.000000 2 1.000000 NA 1.000000 49.500000 IGS_064 igs rps12|clpP rps12-clpP 66096 66393 0 298 LSC 0.010870 3 22 14 284 no 1.000000 2 1.000000 NA 0.926174 48.900000 clpP gene clpP clpP 66394 68313 -1 1920 LSC 0.005735 11 2 57 205 no 1.000000 2 1.000000 NA 0.998958 50.500000 IGS_065 igs clpP|psbB clpP-psbB 68314 68843 0 530 LSC 0.011321 6 0 300 131 no 1.000000 2 1.000000 NA 1.000000 58.600000 psbB gene psbB psbB 68844 70364 1 1521 LSC 0.005917 9 0 218 54 no 1.000000 2 1.000000 NA 1.000000 51.200000 IGS_066 igs psbB|psbT psbB-psbT 70365 70539 0 175 LSC 0.011494 2 1 23 25 no 1.000000 2 1.000000 NA 0.994286 46.400000 psbT gene psbT psbT 70540 70644 1 105 LSC 0.009524 1 0 27 278 no 1.000000 2 1.000000 NA 1.000000 45.000000 IGS_067 igs psbT|psbN psbT-psbN 70645 70759 0 115 LSC 0.000000 0 0 79 163 no 0.000000 1 0.000000 NA 1.000000 24.700000 psbN gene psbN psbN 70760 70891 -1 132 LSC 0.000000 0 0 194 31 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_068 igs psbN|psbH psbN-psbH 70892 71041 0 150 LSC 0.006667 1 0 300 220 no 1.000000 2 1.000000 NA 1.000000 56.300000 psbH gene psbH psbH 71042 71206 1 165 LSC 0.000000 0 0 118 55 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_069 igs psbH|petB psbH-petB 71207 71332 0 126 LSC 0.007937 1 0 283 19 no 1.000000 2 1.000000 NA 1.000000 43.500000 petB gene petB petB 71333 72826 1 1494 LSC 0.010724 16 2 70 1 no 1.000000 2 1.000000 NA 0.998661 50.100000 IGS_070 igs petB|petD petB-petD 72827 72975 0 149 LSC 0.033557 5 0 132 42 no 1.000000 2 1.000000 NA 1.000000 59.900000 petD gene petD petD 72976 74093 1 1118 LSC 0.008050 9 0 9 33 no 1.000000 2 1.000000 NA 1.000000 49.100000 IGS_071 igs petD|rpl36 petD-rpl36 74094 75922 0 1829 LSC 0.011482 21 0 6 124 no 1.000000 2 1.000000 NA 1.000000 50.100000 rpl36 gene rpl36 rpl36 75923 76018 -1 96 LSC 0.000000 0 0 17 28 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_072 igs rpl36|rps8 rpl36-rps8 76019 76568 0 550 LSC 0.005455 3 0 113 300 no 1.000000 2 1.000000 NA 1.000000 54.300000 rps8 gene rps8 rps8 76569 76877 -1 309 LSC 0.000000 0 0 141 141 no 0.000000 1 0.000000 NA 1.000000 29.500000 IGS_073 igs rps8|rpl14 rps8-rpl14 76878 77142 0 265 LSC 0.007547 2 0 300 6 no 1.000000 2 1.000000 NA 1.000000 42.300000 rpl14 gene rpl14 rpl14 77143 77478 -1 336 LSC 0.005952 2 0 109 300 no 1.000000 2 1.000000 NA 1.000000 49.800000 IGS_074 igs rpl14|rpl16 rpl14-rpl16 77479 77652 0 174 LSC 0.000000 0 0 272 180 no 0.000000 1 0.000000 NA 1.000000 32.200000 rpl16 gene rpl16 rpl16 77653 78825 -1 1173 LSC 0.007673 9 0 300 107 no 1.000000 2 1.000000 NA 1.000000 56.200000 IGS_075 igs rpl16|rps3 rpl16-rps3 78826 78931 0 106 LSC 0.000000 0 0 58 1 no 0.000000 1 0.000000 NA 1.000000 18.800000 rps3 gene rps3 rps3 78932 79309 -1 378 LSC 0.015873 6 0 164 48 no 1.000000 2 1.000000 NA 1.000000 51.900000 IGS_076 igs rps3|rps19 rps3-rps19 79310 80093 0 784 LSC 0.010204 8 0 7 21 no 1.000000 2 1.000000 NA 1.000000 50.100000 rps19 gene rps19 rps19 80094 80327 -1 234 LSC 0.004274 1 0 168 121 no 1.000000 2 1.000000 NA 1.000000 49.000000 IGS_077 igs rps19|rpl23 rps19-rpl23 80328 82040 0 1713 LSC 0.011675 20 0 212 296 yes 1.000000 2 1.000000 NA 1.000000 65.000000 rpl23 gene rpl23 rpl23 82041 82301 -1 261 LSC 0.000000 0 0 9 35 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_078 igs rpl23|trnI-CAU rpl23-trnI-CAU 82302 82481 0 180 LSC 0.033333 6 0 270 84 no 1.000000 2 1.000000 NA 1.000000 63.000000 trnI-CAU tRNA trnI-CAU trnI-CAU 82482 82555 -1 74 LSC 0.000000 0 0 50 10 no 0.000000 1 0.000000 NA 1.000000 19.500000 IGS_079 igs trnI-CAU|ndhB trnI-CAU-ndhB 82556 82966 0 411 IRb 0.009732 4 0 124 300 no 1.000000 2 1.000000 NA 1.000000 54.700000 ndhB gene ndhB ndhB 82967 83770 1 804 IRb 0.000000 0 0 229 238 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_080 igs ndhB|trnT-UGU ndhB-trnT-UGU 83771 83972 0 202 IRb 0.000000 0 0 300 36 no 0.000000 1 0.000000 NA 1.000000 21.400000 trnT-UGU_part1 tRNA trnT-UGU trnT-UGU 83973 84006 1 34 IRb 0.000000 0 0 300 2 no 0.000000 1 0.000000 NA 1.000000 18.900000 trnT-UGU_part2 tRNA trnT-UGU trnT-UGU 84522 84561 1 40 IRb 0.000000 0 0 80 242 no 0.000000 1 0.000000 NA 1.000000 24.800000 IGS_083 igs trnT-UGU|trnR-ACG trnT-UGU-trnR-ACG 84562 85282 0 721 IRb 0.002774 2 0 120 233 no 1.000000 2 1.000000 NA 1.000000 54.300000 trnR-ACG tRNA trnR-ACG trnR-ACG 85283 85357 -1 75 IRb 0.000000 0 0 145 158 no 0.000000 1 0.000000 NA 1.000000 29.600000 IGS_084 igs trnR-ACG|rrn5S trnR-ACG-rrn5S 85358 85632 0 275 IRb 0.018182 5 0 220 220 no 1.000000 2 1.000000 NA 1.000000 63.000000 rrn5S rRNA rrn5S rrn5S 85633 85755 -1 123 IRb 0.000000 0 0 12 97 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_085 igs rrn5S|rrn4.5S rrn5S-rrn4.5S 85756 86017 0 262 IRb 0.007634 2 0 135 300 no 1.000000 2 1.000000 NA 1.000000 52.000000 rrn4.5S rRNA rrn4.5S rrn4.5S 86018 86120 -1 103 IRb 0.000000 0 0 84 300 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_086 igs rrn4.5S|rrn23S rrn4.5S-rrn23S 86121 86237 0 117 IRb 0.000000 0 0 187 300 no 0.000000 1 0.000000 NA 1.000000 32.800000 rrn23S rRNA rrn23S rrn23S 86238 89055 -1 2818 IRb 0.000710 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.400000 IGS_087 igs rrn23S|trnA-UGC rrn23S-trnA-UGC 89056 89242 0 187 IRb 0.000000 0 0 249 245 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 89243 89278 -1 36 IRb 0.000000 0 0 300 209 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 90086 90122 -1 37 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_090 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 90123 90203 0 81 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 90204 90239 -1 36 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 91279 91314 -1 36 IRb 0.000000 0 0 156 23 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_093 igs trnI-GAU|rrn16S trnI-GAU-rrn16S 91315 91636 0 322 IRb 0.012500 4 2 192 300 no 1.000000 2 1.000000 NA 0.993789 60.100000 rrn16S rRNA rrn16S rrn16S 91637 93136 -1 1500 IRb 0.000000 0 0 141 95 no 0.000000 1 0.000000 NA 1.000000 32.100000 IGS_094 igs rrn16S|psbA rrn16S-psbA 93137 96953 0 3817 IRb 0.003931 15 1 300 300 no 1.000000 2 1.000000 NA 0.999738 56.600000 psbA gene psbA psbA 96954 98015 1 1062 IRb 0.000000 0 0 224 36 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_095 igs psbA|trnH-GUG psbA-trnH-GUG 98016 98444 0 429 IRb 0.007026 3 2 300 293 no 1.000000 2 1.000000 NA 0.995338 59.700000 trnH-GUG tRNA trnH-GUG trnH-GUG 98445 98518 1 74 IRb 0.000000 0 0 115 219 no 0.000000 1 0.000000 NA 1.000000 27.400000 IGS_096 igs trnH-GUG|trnN-GUU trnH-GUG-trnN-GUU 98519 105636 0 7118 IRb 0.003372 24 0 189 161 no 1.000000 2 1.000000 NA 1.000000 51.500000 trnN-GUU tRNA trnN-GUU trnN-GUU 105637 105708 -1 72 IRb 0.000000 0 0 162 89 no 0.000000 1 0.000000 NA 1.000000 25.400000 IGS_097 igs trnN-GUU|rpl21 trnN-GUU-rpl21 105709 108727 0 3019 SSC 0.016236 49 1 234 151 yes 1.000000 2 1.000000 NA 0.999669 61.300000 rpl21 gene rpl21 rpl21 108728 109084 1 357 SSC 0.005602 2 0 53 16 no 1.000000 2 1.000000 NA 1.000000 43.100000 IGS_098 igs rpl21|rpl32 rpl21-rpl32 109085 109269 0 185 SSC 0.016393 3 2 32 52 no 1.000000 2 1.000000 NA 0.989189 50.400000 rpl32 gene rpl32 rpl32 109270 109449 1 180 SSC 0.022222 4 0 157 58 no 1.000000 2 1.000000 NA 1.000000 54.600000 IGS_099 igs rpl32|trnP-GGG rpl32-trnP-GGG 109450 110101 0 652 SSC 0.024540 16 0 18 92 no 1.000000 2 1.000000 NA 1.000000 59.200000 trnP-GGG tRNA trnP-GGG trnP-GGG 110102 110175 -1 74 SSC 0.000000 0 0 1 18 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_100 igs trnP-GGG|trnL-UAG trnP-GGG-trnL-UAG 110176 110433 0 258 SSC 0.038760 10 0 75 97 yes 1.000000 2 1.000000 NA 1.000000 65.400000 trnL-UAG tRNA trnL-UAG trnL-UAG 110434 110512 1 79 SSC 0.000000 0 0 21 18 no 0.000000 1 0.000000 NA 1.000000 20.100000 IGS_101 igs trnL-UAG|ccsA trnL-UAG-ccsA 110513 110834 0 322 SSC 0.022082 7 5 100 11 no 1.000000 2 1.000000 NA 0.984472 52.900000 ccsA gene ccsA ccsA 110835 111761 1 927 SSC 0.010787 10 0 28 2 no 1.000000 2 1.000000 NA 1.000000 50.100000 IGS_102 igs ccsA|ndhD ccsA-ndhD 111762 112168 0 407 SSC 0.014778 6 1 94 75 no 1.000000 2 1.000000 NA 0.997543 54.100000 ndhD gene ndhD ndhD 112169 113677 -1 1509 SSC 0.008615 13 0 57 26 no 1.000000 2 1.000000 NA 1.000000 50.600000 IGS_103 igs ndhD|psaC ndhD-psaC 113678 113814 0 137 SSC 0.014599 2 0 300 279 no 1.000000 2 1.000000 NA 1.000000 60.900000 psaC gene psaC psaC 113815 114060 -1 246 SSC 0.000000 0 0 39 33 no 0.000000 1 0.000000 NA 1.000000 21.200000 IGS_104 igs psaC|ndhE psaC-ndhE 114061 114371 0 311 SSC 0.022508 7 0 285 179 yes 1.000000 2 1.000000 NA 1.000000 64.100000 ndhE gene ndhE ndhE 114372 114599 -1 228 SSC 0.004386 1 0 136 113 no 1.000000 2 1.000000 NA 1.000000 48.500000 IGS_105 igs ndhE|ndhG ndhE-ndhG 114600 114770 0 171 SSC 0.011765 2 1 48 281 no 1.000000 2 1.000000 NA 0.994152 48.400000 ndhG gene ndhG ndhG 114771 115373 -1 603 SSC 0.004975 3 0 30 230 no 1.000000 2 1.000000 NA 1.000000 48.900000 IGS_106 igs ndhG|ndhI ndhG-ndhI 115374 115492 0 119 SSC 0.000000 0 1 269 111 no 1.000000 2 1.000000 NA 0.991597 46.600000 ndhI gene ndhI ndhI 115493 115984 -1 492 SSC 0.014228 7 0 300 48 no 1.000000 2 1.000000 NA 1.000000 53.300000 IGS_107 igs ndhI|ndhA ndhI-ndhA 115985 116191 0 207 SSC 0.009662 2 0 62 149 no 1.000000 2 1.000000 NA 1.000000 47.700000 ndhA gene ndhA ndhA 116192 118267 -1 2076 SSC 0.013969 29 0 32 50 no 1.000000 2 1.000000 NA 1.000000 53.000000 IGS_108 igs ndhA|rps15 ndhA-rps15 118268 119551 0 1284 SSC 0.005469 7 4 14 12 no 1.000000 2 1.000000 NA 0.996885 48.100000 rps15 gene rps15 rps15 119552 119821 -1 270 SSC 0.014815 4 0 119 260 no 1.000000 2 1.000000 NA 1.000000 54.900000 IGS_109 igs rps15|ycf1 rps15-ycf1 119822 120131 0 310 SSC 0.003226 1 0 51 194 no 1.000000 2 1.000000 NA 1.000000 43.400000 ycf1 gene ycf1 ycf1 120132 124145 -1 4014 SSC 0.014699 59 0 49 20 no 1.000000 2 1.000000 NA 1.000000 49.000000 IGS_110 igs ycf1|chlN ycf1-chlN 124146 125640 0 1495 SSC 0.015572 23 18 14 69 yes 1.000000 2 1.000000 NA 0.987960 54.900000 chlN gene chlN chlN 125641 127026 -1 1386 SSC 0.012987 18 0 13 20 no 1.000000 2 1.000000 NA 1.000000 52.200000 IGS_111 igs chlN|chlL chlN-chlL 127027 127268 0 242 SSC 0.008264 2 0 131 48 no 1.000000 2 1.000000 NA 1.000000 45.900000 chlL gene chlL chlL 127269 128009 -1 741 SSC 0.013495 10 0 102 33 no 1.000000 2 1.000000 NA 1.000000 54.000000 IGS_112 igs chlL|trnN-GUU chlL-trnN-GUU 128010 128452 0 443 IRa 0.015837 7 1 38 234 no 1.000000 2 1.000000 NA 0.997743 52.600000 trnN-GUU tRNA trnN-GUU trnN-GUU 128453 128524 1 72 IRa 0.000000 0 0 89 162 no 0.000000 1 0.000000 NA 1.000000 25.400000 IGS_113 igs trnN-GUU|trnH-GUG trnN-GUU-trnH-GUG 128525 135642 0 7118 IRa 0.003372 24 0 161 189 no 1.000000 2 1.000000 NA 1.000000 51.500000 trnH-GUG tRNA trnH-GUG trnH-GUG 135643 135716 -1 74 IRa 0.000000 0 0 219 115 no 0.000000 1 0.000000 NA 1.000000 27.400000 IGS_114 igs trnH-GUG|psbA trnH-GUG-psbA 135717 136145 0 429 IRa 0.007026 3 2 293 300 no 1.000000 2 1.000000 NA 0.995338 59.700000 psbA gene psbA psbA 136146 137207 -1 1062 IRa 0.000000 0 0 36 224 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_115 igs psbA|rps12 psbA-rps12 137208 138278 0 1071 IRa 0.005602 6 0 300 300 no 1.000000 2 1.000000 NA 1.000000 62.000000 rps12_part2 gene rps12 rps12 138279 139133 -1 855 IRa 0.001170 1 0 161 300 no 1.000000 2 1.000000 NA 1.000000 56.500000 IGS_116 igs rps12|rrn16S rps12-rrn16S 139134 141024 0 1891 IRa 0.004233 8 1 300 300 no 1.000000 2 1.000000 NA 0.999471 60.400000 rrn16S rRNA rrn16S rrn16S 141025 142524 1 1500 IRa 0.000000 0 0 95 141 no 0.000000 1 0.000000 NA 1.000000 32.100000 IGS_117 igs rrn16S|trnI-GAU rrn16S-trnI-GAU 142525 142846 0 322 IRa 0.012500 4 2 300 192 no 1.000000 2 1.000000 NA 0.993789 60.100000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 142847 142882 1 36 IRa 0.000000 0 0 23 156 no 0.000000 1 0.000000 NA 1.000000 20.500000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 143922 143957 1 36 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_120 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 143958 144038 0 81 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 144039 144075 1 37 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 144883 144918 1 36 IRa 0.000000 0 0 209 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_123 igs trnA-UGC|rrn23S trnA-UGC-rrn23S 144919 145105 0 187 IRa 0.000000 0 0 245 249 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23S rRNA rrn23S rrn23S 145106 147923 1 2818 IRa 0.000710 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.400000 IGS_124 igs rrn23S|rrn4.5S rrn23S-rrn4.5S 147924 148040 0 117 IRa 0.000000 0 0 300 187 no 0.000000 1 0.000000 NA 1.000000 32.800000 rrn4.5S rRNA rrn4.5S rrn4.5S 148041 148143 1 103 IRa 0.000000 0 0 300 84 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_125 igs rrn4.5S|rrn5S rrn4.5S-rrn5S 148144 148405 0 262 IRa 0.007634 2 0 300 135 no 1.000000 2 1.000000 NA 1.000000 52.000000 rrn5S rRNA rrn5S rrn5S 148406 148528 1 123 IRa 0.000000 0 0 97 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_126 igs rrn5S|trnR-ACG rrn5S-trnR-ACG 148529 148803 0 275 IRa 0.018182 5 0 220 220 no 1.000000 2 1.000000 NA 1.000000 63.000000 trnR-ACG tRNA trnR-ACG trnR-ACG 148804 148878 1 75 IRa 0.000000 0 0 158 145 no 0.000000 1 0.000000 NA 1.000000 29.600000 IGS_127 igs trnR-ACG|trnT-UGU trnR-ACG-trnT-UGU 148879 149599 0 721 IRa 0.002774 2 0 233 120 no 1.000000 2 1.000000 NA 1.000000 54.300000 trnT-UGU_part2 tRNA trnT-UGU trnT-UGU 149600 149639 -1 40 IRa 0.000000 0 0 242 80 no 0.000000 1 0.000000 NA 1.000000 24.800000 trnT-UGU_part1 tRNA trnT-UGU trnT-UGU 150155 150188 -1 34 IRa 0.000000 0 0 2 300 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_130 igs trnT-UGU|ndhB trnT-UGU-ndhB 150189 150390 0 202 IRa 0.000000 0 0 36 300 no 0.000000 1 0.000000 NA 1.000000 21.400000 ndhB gene ndhB ndhB 150391 151194 -1 804 IRa 0.000000 0 0 238 229 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_131 igs ndhB|matK ndhB-matK 151195 1456 0 1795 LSC 0.020694 37 7 300 102 no 1.000000 2 1.000000 NA 0.996100 63.100000