primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AACTCTACCGATGGTGTGGA TCTTGAAAAGGGTGCTCAACC 20 21 50.0 47.6 58.1 58.7 0.0 0.0 1.760131 4252 5572 1496-1510 1.000000 68.0 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 CGATGGTGTGGACAAATCCT TCTTGAAAAGGGTGCTCAACC 20 21 50.0 47.6 57.9 58.7 0.0 0.0 1.807013 4252 5572 1488-1502 1.000000 67.7 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 ACCGATGGTGTGGACAAATC TCTTGAAAAGGGTGCTCAACC 20 21 50.0 47.6 58.2 58.7 0.0 0.0 1.871936 4252 5572 1490-1504 1.000000 67.2 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AACTCTACCGATGGTGTGGA TCTTGAAAAGGGTGCTCAAC 20 20 50.0 45.0 58.1 56.2 0.0 0.0 1.900507 4252 5572 1496-1510 1.000000 66.9 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 CGATGGTGTGGACAAATCCT TCTTGAAAAGGGTGCTCAAC 20 20 50.0 45.0 57.9 56.2 0.0 0.0 1.947389 4252 5572 1488-1502 1.000000 66.6 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 TCCACACCAGATCATGTCCT TTTGGTCCCGCTATTCGAAG 20 20 50.0 50.0 58.0 58.0 0.0 3.3 0.061673 6737 7329 705-1215 1.000000 80.2 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 TCCACACCAGATCATGTCCT TACATTTTAGTGGGGCGTGG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.159958 6737 7329 746-1256 1.000000 79.4 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 TCCACACCAGATCATGTCCT GTTTTGGTCCCGCTATTCGA 20 20 50.0 50.0 58.0 58.3 0.0 0.0 0.313848 6737 7329 707-1217 1.000000 78.2 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 ACACACGTTGCTTTCTACCA TTTGGTCCCGCTATTCGAAG 20 20 45.0 50.0 57.7 58.0 0.0 3.3 0.337678 6737 7329 680-1190 1.000000 78.0 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 ACACGTTGCTTTCTACCACA TTTGGTCCCGCTATTCGAAG 20 20 45.0 50.0 57.7 58.0 0.0 3.3 0.337678 6737 7329 678-1188 1.000000 78.0 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 ACGGAAAGAGAGGGATTCGA ATTGGGGATCTAACCGAGGC 20 20 50.0 55.0 58.2 59.2 0.0 0.0 1.385838 8513 9472 1098-1135 1.000000 73.3 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 CGAATCACTCGTACAACGGA ATTGGGGATCTAACCGAGGC 20 20 50.0 55.0 57.7 59.2 0.0 0.0 1.486359 8513 9472 1068-1105 1.000000 72.7 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 ACGGAAAGAGAGGGATTCGA AATTGGGGATCTAACCGAGG 20 20 50.0 50.0 58.2 56.7 0.0 0.0 1.476514 8513 9472 1099-1136 1.000000 72.6 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 CGAATCACTCGTACAACGGA AATTGGGGATCTAACCGAGG 20 20 50.0 50.0 57.7 56.7 0.0 0.0 1.577035 8513 9472 1069-1106 1.000000 71.9 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 ACGGAAAGAGAGGGATTCGA AAATTGGGGATCTAACCGAGG 20 21 50.0 47.6 58.2 57.4 0.0 0.0 1.729153 8513 9472 1100-1137 1.000000 70.6 atpH-atpI_p1 atpH-atpI 1 AACAGAAGCGGCAGAAATCA ACAAGTGGTATCCAGGCTCT 20 20 45.0 50.0 58.1 58.0 1.4 0.0 0.145492 14213 14929 821-825 1.000000 80.3 atpH-atpI_p2 atpH-atpI 2 AACAGAAGCGGCAGAAATCA ATAGGGGAATCCATGGAGGG 20 20 45.0 55.0 58.1 57.9 1.4 21.3 0.169579 14213 14929 773-777 1.000000 80.2 atpH-atpI_p3 atpH-atpI 3 TACCTTGACCAACTCCAGGT ACAAGTGGTATCCAGGCTCT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.153991 14213 14929 879-883 1.000000 80.1 atpH-atpI_p4 atpH-atpI 4 TACCTTGACCAACTCCAGGT ATAGGGGAATCCATGGAGGG 20 20 50.0 55.0 57.9 57.9 0.0 21.3 0.178077 14213 14929 831-835 1.000000 80.0 atpH-atpI_p5 atpH-atpI 5 AGCCAATCCAGCAGCAATAA ACAAGTGGTATCCAGGCTCT 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.190157 14213 14929 839-843 1.000000 79.9 ycf3_p1 ycf3 1 TCCCACGAGAGGTAATGAGA TGATTGATTGGCTCTTCCCG 20 20 50.0 50.0 57.2 58.0 0.0 0.0 0.863414 57306 59708 2458-2510 1.000000 78.9 ycf3_p2 ycf3 2 TCCCACGAGAGGTAATGAGA GATTGGCTCTTCCCGGAATT 20 20 50.0 50.0 57.2 57.9 0.0 0.7 0.879321 57306 59708 2453-2505 1.000000 78.8 ycf3_p3 ycf3 3 TCCCACGAGAGGTAATGAGA TTGGCTCTTCCCGGAATTTT 20 20 50.0 45.0 57.2 57.7 0.0 0.7 1.123315 57306 59708 2451-2503 1.000000 76.9 ycf3_p4 ycf3 4 TCCCACGAGAGGTAATGAGAA TGATTGATTGGCTCTTCCCG 21 20 47.6 50.0 57.9 58.0 0.0 0.0 1.138598 57306 59708 2458-2510 1.000000 76.7 ycf3_p5 ycf3 5 TTCCCACGAGAGGTAATGAGA TGATTGATTGGCTCTTCCCG 21 20 47.6 50.0 57.9 58.0 0.0 0.0 1.138598 57306 59708 2459-2511 1.000000 76.7 ycf3-accD_p1 ycf3-accD 1 TGAAATTGCAGAGGCTTGGT GGGGAGTTGTTGGGACTTTT 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.082492 59709 60680 1235-1299 1.000000 89.9 ycf3-accD_p2 ycf3-accD 2 TGAAACTCATGCACCTTGCT GGGGAGTTGTTGGGACTTTT 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.096667 59709 60680 1442-1502 1.000000 89.0 ycf3-accD_p3 ycf3-accD 3 TGAAATTGCAGAGGCTTGGT GGGAATTGCTAGGGGAGTTG 20 20 45.0 55.0 58.0 57.9 0.0 0.0 0.058945 59709 60680 1278-1310 0.666667 75.8 ycf3-accD_p4 ycf3-accD 4 TGAAACTCATGCACCTTGCT GGGAATTGCTAGGGGAGTTG 20 20 45.0 55.0 58.0 57.9 0.0 0.0 0.073120 59709 60680 1485-1513 0.666667 75.0 ycf3-accD_p5 ycf3-accD 5 GCTGAAGGTGGGACAAAAGA GGGAATTGCTAGGGGAGTTG 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.077336 59709 60680 1549-1577 0.666667 74.8 accD_p1 accD 1 ACGTTACGGTTGGTTATTTGT CTTAGTCAGCCTTCGATGCA 21 20 38.1 50.0 56.1 57.7 10.2 9.7 3.185063 60681 63356 2667-2901 0.666667 49.9 accD_p2 accD 2 ACGTTACGGTTGGTTATTTGT ACTTAGTCAGCCTTCGATGC 21 20 38.1 50.0 56.1 57.7 10.2 0.0 3.186647 60681 63356 2668-2902 0.666667 49.9 accD_p3 accD 3 ACGTTACGGTTGGTTATTTGT AGTCAGCCTTCGATGCATTG 21 20 38.1 50.0 56.1 58.6 10.2 7.7 3.508527 60681 63356 2664-2898 0.666667 47.3 accD_p4 accD 4 ACGTTACGGTTGGTTATTTGT GTCAGCCTTCGATGCATTGA 21 20 38.1 50.0 56.1 58.6 10.2 12.9 3.512487 60681 63356 2663-2897 0.666667 47.3 accD_p5 accD 5 ACGTTACGGTTGGTTATTTGT TCAGCCTTCGATGCATTGAC 21 20 38.1 50.0 56.1 58.6 10.2 16.5 3.512487 60681 63356 2662-2896 0.666667 47.3 rpl33-rps18_p1 rpl33-rps18 1 AAGAATCGACACAACACCCC TACGAAAAGCGCGCTTAGAT 20 20 50.0 45.0 58.1 58.1 0.0 43.0 0.190518 71998 72377 495-527 1.000000 83.1 rpl33-rps18_p2 rpl33-rps18 2 AAGAATCGACACAACACCCC TAAGGAGGGATCGCTTGGAT 20 20 50.0 50.0 58.1 57.9 0.0 14.2 0.210944 71998 72377 474-506 1.000000 83.0 rpl33-rps18_p3 rpl33-rps18 3 AAGAATCGACACAACACCCC TTAAGGAGGGATCGCTTGGA 20 20 50.0 50.0 58.1 58.1 0.0 14.2 0.233661 71998 72377 475-507 1.000000 82.8 rpl33-rps18_p4 rpl33-rps18 4 AAGAATCGACACAACACCCC CGAAAAGCGCGCTTAGATTT 20 20 50.0 45.0 58.1 57.8 0.0 43.0 0.267257 71998 72377 493-525 1.000000 82.5 rpl33-rps18_p5 rpl33-rps18 5 CCCCAGTCGGTTGGAATTAA TACGAAAAGCGCGCTTAGAT 20 20 50.0 45.0 57.5 58.1 7.6 43.0 0.583120 71998 72377 478-510 1.000000 80.0 rpl2-trnI-CAU_p1 rpl2-trnI-CAU 1 TTGTCCACCCTTTCCAAGTG GCTAAGCATCCATGGCTGAA 20 20 50.0 50.0 57.9 58.3 0.0 19.8 0.381955 88500 89787 1384-1424 1.000000 80.7 rpl2-trnI-CAU_p2 rpl2-trnI-CAU 2 GCAATCAGTTTCGCTACAGC GCTAAGCATCCATGGCTGAA 20 20 50.0 50.0 57.8 58.3 0.0 19.8 0.481339 88500 89787 1422-1462 1.000000 79.8 rpl2-trnI-CAU_p3 rpl2-trnI-CAU 3 ATCAGTTTCGCTACAGCACC GCTAAGCATCCATGGCTGAA 20 20 50.0 50.0 58.3 58.3 1.6 19.8 0.589203 88500 89787 1419-1459 1.000000 78.9 rpl2-trnI-CAU_p4 rpl2-trnI-CAU 4 CCACCCTTTCCAAGTGTGAT GCTAAGCATCCATGGCTGAA 20 20 50.0 50.0 57.7 58.3 1.2 19.8 0.608885 88500 89787 1380-1420 1.000000 78.9 rpl2-trnI-CAU_p5 rpl2-trnI-CAU 5 TTGTCCACCCTTTCCAAGTG GCACCCAACTCATAATTGGC 20 20 50.0 50.0 57.9 57.4 0.0 0.0 0.650391 88500 89787 1356-1396 1.000000 78.6 ndhF-rpl32_p1 ndhF-rpl32 1 AAAAGGTATGCTCCATGCGT TGTTTCCGAAAAGCCCTTTC 20 20 45.0 45.0 57.9 56.8 0.0 0.0 1.297966 122769 123865 1201-1220 1.000000 73.0 ndhF-rpl32_p2 ndhF-rpl32 2 AAAAGGTATGCTCCATGCGT TGTTTCCGAAAAGCCCTTTCT 20 21 45.0 42.9 57.9 58.3 0.0 0.0 1.467052 122769 123865 1201-1220 1.000000 71.6 ndhF-rpl32_p3 ndhF-rpl32 3 AAAAGGTATGCTCCATGCGT ACGCTTTTTGGAAATTGACGT 20 21 45.0 38.1 57.9 57.6 0.0 0.0 1.559103 122769 123865 1159-1178 1.000000 71.0 ndhF-rpl32_p4 ndhF-rpl32 4 AAAAGGTATGCTCCATGCGT GTTTCCGAAAAGCCCTTTCT 20 20 45.0 45.0 57.9 56.5 0.0 0.0 1.596187 122769 123865 1200-1219 1.000000 70.6 ndhF-rpl32_p5 ndhF-rpl32 5 AAAAGGTATGCTCCATGCGT ATGTTTCCGAAAAGCCCTTTC 20 21 45.0 42.9 57.9 57.3 0.0 0.0 1.789271 122769 123865 1202-1221 1.000000 69.1 ccsA-ndhD_p1 ccsA-ndhD 1 GGATATGCTACTTTGGGGTCA ATCAGTTGATAAGGCGGAAGC 21 21 47.6 47.6 57.1 58.4 0.0 0.0 3.291316 125956 126182 352-353 1.000000 57.1 ccsA-ndhD_p2 ccsA-ndhD 2 TGGATATGCTACTTTGGGGTC ATCAGTTGATAAGGCGGAAGC 21 21 47.6 47.6 57.1 58.4 0.0 0.0 3.291316 125956 126182 353-354 1.000000 57.1 ccsA-ndhD_p3 ccsA-ndhD 3 TGGATATGCTACTTTGGGGT ATCAGTTGATAAGGCGGAAGC 20 21 45.0 47.6 55.9 58.4 0.0 0.0 3.556296 125956 126182 353-354 1.000000 54.9 ccsA-ndhD_p4 ccsA-ndhD 4 GGATATGCTACTTTGGGGTCAA ATCAGTTGATAAGGCGGAAGC 22 21 45.5 47.6 57.8 58.4 0.0 0.0 3.599001 125956 126182 352-353 1.000000 54.6 ccsA-ndhD_p5 ccsA-ndhD 5 TTGGATATGCTACTTTGGGGTC ATCAGTTGATAAGGCGGAAGC 22 21 45.5 47.6 57.8 58.4 0.0 0.0 3.599001 125956 126182 354-355 1.000000 54.6 ycf1_p1 ycf1 1 CGGCTCCAATTCTTCCTTCT TCAAAAGCAAGAAAAGCAAGA 20 21 50.0 33.3 57.6 54.8 0.0 0.0 4.621435 134824 134943 289-328 1.000000 51.2 ycf1_p2 ycf1 2 GCAAAGCGTATAGTCTCCCA TCAAAAGCAAGAAAAGCAAGA 20 21 50.0 33.3 57.4 54.8 0.0 0.0 4.808390 134824 134943 257-296 1.000000 50.2 ycf1_p3 ycf1 3 CGGCTCCAATTCTTCCTTCT TCAAAAGCAAGAAAAGCAAGAA 20 22 50.0 31.8 57.6 55.6 0.0 0.0 4.833060 134824 134943 289-328 1.000000 49.5 ycf1_p4 ycf1 4 GCAAAGCGTATAGTCTCCCA TCAAAAGCAAGAAAAGCAAGAA 20 22 50.0 31.8 57.4 55.6 0.0 0.0 5.020015 134824 134943 257-296 1.000000 48.7 ycf1_p5 ycf1 5 CGGCTCCAATTCTTCCTTCT ATCAAAAGCAAGAAAAGCAAGA 20 22 50.0 31.8 57.6 55.4 0.0 0.0 5.046468 134824 134943 290-329 1.000000 48.2 ycf2-trnI-CAU_p1 ycf2-trnI-CAU 1 CAGAATTCTTGACCCCTCTCA ATTGGTGTGCATCCAGTAGG 21 20 47.6 50.0 57.0 57.6 4.9 12.2 2.414119 164170 164497 502-506 1.000000 62.0 ycf2-trnI-CAU_p2 ycf2-trnI-CAU 2 ACTCAGAATTCTTGACCCCTC ATTGGTGTGCATCCAGTAGG 21 20 47.6 50.0 57.0 57.6 4.9 12.2 2.416102 164170 164497 505-509 1.000000 61.9 ycf2-trnI-CAU_p3 ycf2-trnI-CAU 3 CTCAGAATTCTTGACCCCTCTC ATTGGTGTGCATCCAGTAGG 22 20 50.0 50.0 57.9 57.6 4.9 12.2 2.560890 164170 164497 504-508 1.000000 60.8 ycf2-trnI-CAU_p4 ycf2-trnI-CAU 4 CAGAATTCTTGACCCCTCTCA GCCAATTATGAGTTGGGTGC 21 20 47.6 50.0 57.0 57.4 4.9 7.0 2.573468 164170 164497 464-468 1.000000 60.8 ycf2-trnI-CAU_p5 ycf2-trnI-CAU 5 ACTCAGAATTCTTGACCCCTC GCCAATTATGAGTTGGGTGC 21 20 47.6 50.0 57.0 57.4 4.9 7.0 2.575450 164170 164497 467-471 1.000000 60.8