Hotspot

trnT-UGU-trnL-UAA

LSC · 47966-48950 · 985 bp

Back to Cerasus

Pi 0.00109
MarkerSeek score 63.70
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 971-1035 bp 1.0 83.0
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 979-1043 bp 1.0 82.5
trnT-UGU-trnL-UAA_p3 TGTAGAAAAGCCGGCTATCG ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 1022-1086 bp 1.0 82.3
trnT-UGU-trnL-UAA_p4 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 1003-1067 bp 1.0 82.1
trnT-UGU-trnL-UAA_p5 TGTAGAAAAGCCGGCTATCG TAGCGTCTACCAATTTCGCC 50.0 50.0 57.8 58.1 1030-1094 bp 1.0 81.8