Hotspot

trnT-UGU-trnL-UAA

LSC · 48145-49281 · 1137 bp

Back to Caryota

Pi 0.00096
MarkerSeek score 63.20
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 1097-1187 bp 1.0 83.0
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG ACAATCAAGTCCGTAGCGTC 55.0 50.0 57.9 58.0 1118-1208 bp 1.0 82.9
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 1105-1195 bp 1.0 82.5
trnT-UGU-trnL-UAA_p4 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 1129-1219 bp 1.0 82.1
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT ACAATCAAGTCCGTAGCGTC 50.0 50.0 57.8 58.0 1150-1240 bp 1.0 82.1