primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG CCCTCTAGACTTAGCTGCTCT 20 21 55.0 52.4 58.1 58.1 0.0 4.9 1.184790 80 400 389-389 1.000000 70.7 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA CCCTCTAGACTTAGCTGCTCT 20 21 50.0 52.4 57.9 58.1 0.0 4.9 1.189152 80 400 403-403 1.000000 70.7 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 GATCCACTTGGCTACATCCG TCCCTCTAGACTTAGCTGCTC 20 21 55.0 52.4 58.1 58.1 0.0 4.9 1.190082 80 400 390-390 1.000000 70.7 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 AATCCACTGCCTTGATCCAC CCCTCTAGACTTAGCTGCTCT 20 21 50.0 52.4 57.9 58.1 0.0 4.9 1.190659 80 400 402-402 1.000000 70.7 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 ACAATCCACTGCCTTGATCC CCCTCTAGACTTAGCTGCTCT 20 21 50.0 52.4 57.9 58.1 0.0 4.9 1.190659 80 400 404-404 1.000000 70.7 trnK-UUU_p1 trnK-UUU 1 AATGAAATGAGTTAACAAGTTCA TTTGTTAGGATTCCGATTGT 23 20 26.1 35.0 52.8 52.5 19.7 0.0 13.687037 1727 4372 2747-2753 1.000000 40.2 trnK-UUU_p2 trnK-UUU 2 AATGAAATGAGTTAACAAGTTCA TGTTAGGATTCCGATTGTATCT 23 22 26.1 36.4 52.8 54.4 19.7 0.0 13.730816 1727 4372 2745-2751 1.000000 40.2 trnK-UUU_p3 trnK-UUU 3 AATGAAATGAGTTAACAAGTTCA TTTTGTTAGGATTCCGATTGT 23 21 26.1 33.3 52.8 53.4 19.7 0.0 13.743025 1727 4372 2748-2754 1.000000 40.2 trnK-UUU_p4 trnK-UUU 4 AAATGAAATGAGTTAACAAGTTCA TTTGTTAGGATTCCGATTGT 24 20 25.0 35.0 53.7 52.5 19.7 0.0 13.875455 1727 4372 2748-2754 1.000000 40.2 trnK-UUU_p5 trnK-UUU 5 AATGAAATGAGTTAACAAGTTCA TTTTTGTTAGGATTCCGATTGT 23 22 26.1 31.8 52.8 54.3 19.7 0.0 13.884628 1727 4372 2749-2755 1.000000 40.2 matK_p1 matK 1 TTCCACGGTCGAATAACCAA ACCTTGTTTGGACTGTATCGT 20 21 45.0 42.9 57.2 57.2 0.0 0.0 2.599817 2044 3573 1629-1635 1.000000 59.5 matK_p2 matK 2 TTTCCACGGTCGAATAACCA ACCTTGTTTGGACTGTATCGT 20 21 45.0 42.9 57.2 57.2 0.0 0.0 2.599817 2044 3573 1630-1636 1.000000 59.5 matK_p3 matK 3 TTTCCACGGTCGAATAACCAA ACCTTGTTTGGACTGTATCGT 21 21 42.9 42.9 57.9 57.2 0.0 0.0 2.887394 2044 3573 1630-1636 1.000000 57.2 matK_p4 matK 4 ATTTCCACGGTCGAATAACCA ACCTTGTTTGGACTGTATCGT 21 21 42.9 42.9 57.7 57.2 0.0 0.0 3.101931 2044 3573 1631-1637 1.000000 55.5 matK_p5 matK 5 TTCCACGGTCGAATAACCAA CCTTGTTTGGACTGTATCGT 20 20 45.0 45.0 57.2 55.4 0.0 0.0 3.439795 2044 3573 1628-1634 1.000000 52.8 matK-trnK-UUU_p1 matK-trnK-UUU 1 GGAGGTCATGTTGCCAAGAT TCGGGTTGCTAACTCAATGG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.242739 3574 4335 856-856 1.000000 78.2 matK-trnK-UUU_p2 matK-trnK-UUU 2 GGAGGTCATGTTGCCAAGAT CGGGTTGCTAACTCAATGGT 20 20 50.0 50.0 57.9 58.2 0.0 0.0 0.313573 3574 4335 855-855 1.000000 77.6 matK-trnK-UUU_p3 matK-trnK-UUU 3 TAGGAGGTCATGTTGCCAAG TCGGGTTGCTAACTCAATGG 20 20 50.0 50.0 57.2 57.9 0.0 0.0 0.895423 3574 4335 858-858 1.000000 72.9 matK-trnK-UUU_p4 matK-trnK-UUU 4 TAGGAGGTCATGTTGCCAAG CGGGTTGCTAACTCAATGGT 20 20 50.0 50.0 57.2 58.2 0.0 0.0 0.966257 3574 4335 857-857 1.000000 72.4 matK-trnK-UUU_p5 matK-trnK-UUU 5 AGGAGGTCATGTTGCCAAGA TCGGGTTGCTAACTCAATGG 20 20 50.0 50.0 58.9 57.9 0.0 0.0 1.040655 3574 4335 857-857 1.000000 71.8 rps16_p1 rps16 1 AGCAGAGAAAAGATTATAATCCGA AGTACTAACCGAACCAATGA 24 20 33.3 40.0 55.8 53.7 19.7 0.0 10.533797 5271 6421 1271-1272 1.000000 40.2 rps16_p2 rps16 2 AGCAGAGAAAAGATTATAATCCGA AAGTACTAACCGAACCAATGA 24 21 33.3 38.1 55.8 54.6 19.7 0.0 10.648742 5271 6421 1272-1273 1.000000 40.2 rps16_p3 rps16 3 AGCAGAGAAAAGATTATAATCCGAAC AGTACTAACCGAACCAATGA 26 20 34.6 40.0 57.6 53.7 19.7 0.0 10.661680 5271 6421 1271-1272 1.000000 40.2 rps16_p4 rps16 4 GCAGAGAAAAGATTATAATCCGAACT AGTACTAACCGAACCAATGA 26 20 34.6 40.0 57.6 53.7 19.7 0.0 10.661680 5271 6421 1270-1271 1.000000 40.2 rps16_p5 rps16 5 GCAGAGAAAAGATTATAATCCGAACT AAGTACTAACCGAACCAATGA 26 21 34.6 38.1 57.6 54.6 19.7 0.0 10.776625 5271 6421 1271-1272 1.000000 40.2 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6422 7203 854-855 1.000000 78.4 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 CGGATCGTGTCCTTCAAGTC GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.4 58.1 7.8 16.9 0.445953 6422 7203 869-870 1.000000 76.5 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 GGATCGTGTCCTTCAAGTCG GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.4 58.1 2.9 16.9 0.445953 6422 7203 868-869 1.000000 76.5 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAGTCGCACGTTGCTTTCTA TTCGGAGGTTCGAATCCTTC 20 20 45.0 50.0 58.1 57.3 8.1 16.9 0.806797 6422 7203 858-859 1.000000 73.6 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGTCGCACGTTGCTTTCTA TAAGGCAACGGGTTTTGGTC 20 20 45.0 50.0 58.1 58.7 8.1 0.0 0.818817 6422 7203 884-885 1.000000 73.5 trnS-GCU-trnG_p1 trnS-GCU-trnG 1 CAATCCGACGCTTTAGTCCA ATTCATCAAACCGAGGGACC 20 20 50.0 50.0 58.0 57.6 0.0 0.0 0.424641 8586 9429 958-959 1.000000 76.9 trnS-GCU-trnG_p2 trnS-GCU-trnG 2 AATCCGACGCTTTAGTCCAC ATTCATCAAACCGAGGGACC 20 20 50.0 50.0 58.0 57.6 0.0 0.0 0.426029 8586 9429 957-958 1.000000 76.8 trnS-GCU-trnG_p3 trnS-GCU-trnG 3 ACGGAAAGAGAGGGATTCGA ATTCATCAAACCGAGGGACC 20 20 50.0 50.0 58.2 57.6 0.0 0.0 0.571407 8586 9429 1012-1013 1.000000 75.7 trnS-GCU-trnG_p4 trnS-GCU-trnG 4 ACGAAAACGGAAAGAGAGGG ATTCATCAAACCGAGGGACC 20 20 50.0 50.0 57.8 57.6 0.0 0.0 0.585377 8586 9429 1018-1019 1.000000 75.6 trnS-GCU-trnG_p5 trnS-GCU-trnG 5 AGCAATCCGACGCTTTAGTC ATTCATCAAACCGAGGGACC 20 20 50.0 50.0 58.4 57.6 0.0 0.0 0.778481 8586 9429 960-961 1.000000 74.0 rpoC1_p1 rpoC1 1 GGGACTCGAATTCACACTGG GGAAGGACGCTTAATCGGAA 20 20 55.0 50.0 58.3 57.7 6.2 3.5 0.577898 21078 23941 2958-2958 1.000000 75.4 rpoC1_p2 rpoC1 2 GGGACTCGAATTCACACTGG GGACGCTTAATCGGAAGGAA 20 20 55.0 50.0 58.3 57.7 6.2 3.5 0.577898 21078 23941 2954-2954 1.000000 75.4 rpoC1_p3 rpoC1 3 GGGACTCGAATTCACACTGG AAGGACGCTTAATCGGAAGG 20 20 55.0 50.0 58.3 57.7 6.2 3.5 0.584271 21078 23941 2956-2956 1.000000 75.4 rpoC1_p4 rpoC1 4 GGGACTCGAATTCACACTGG AGGAAGGACGCTTAATCGGA 20 20 55.0 50.0 58.3 58.5 6.2 3.5 0.791276 21078 23941 2959-2959 1.000000 73.7 rpoC1_p5 rpoC1 5 GGGACTCGAATTCACACTGG AGGACGCTTAATCGGAAGGA 20 20 55.0 50.0 58.3 58.5 6.2 3.5 0.791276 21078 23941 2955-2955 1.000000 73.7 psaB_p1 psaB 1 GCCTCTTCTTCTCCCTCTGA AAGGACGTGCTGTAGGAGTA 20 20 55.0 50.0 58.1 57.8 0.0 11.4 0.351948 38033 40237 2408-2408 1.000000 77.2 psaB_p2 psaB 2 GCCTCTTCTTCTCCCTCTGA AGGACGTGCTGTAGGAGTAA 20 20 55.0 50.0 58.1 57.8 0.0 9.5 0.351948 38033 40237 2407-2407 1.000000 77.2 psaB_p3 psaB 3 GCCTCTTCTTCTCCCTCTGA GACGTGCTGTAGGAGTAACC 20 20 55.0 55.0 58.1 57.7 0.0 0.0 0.415618 38033 40237 2405-2405 1.000000 76.7 psaB_p4 psaB 4 GCCTCTTCTTCTCCCTCTGA GGACGTGCTGTAGGAGTAAC 20 20 55.0 55.0 58.1 57.7 0.0 0.0 0.415618 38033 40237 2406-2406 1.000000 76.7 psaB_p5 psaB 5 TTGCCTCTTCTTCTCCCTCT AGGACGTGCTGTAGGAGTAA 20 20 50.0 50.0 57.7 57.8 0.0 9.5 0.545256 38033 40237 2409-2409 1.000000 75.7 ycf3_p1 ycf3 1 ACACATACAAAGAGACCCGC AATGCCCTTGTTTGTGGGAT 20 20 50.0 45.0 57.9 58.0 0.0 1.8 0.123324 43187 45200 2737-2738 1.000000 79.0 ycf3_p2 ycf3 2 ACACATACAAAGAGACCCGC ATGCCCTTGTTTGTGGGATT 20 20 50.0 45.0 57.9 58.0 0.0 1.8 0.123324 43187 45200 2736-2737 1.000000 79.0 ycf3_p3 ycf3 3 CATACAAAGAGACCCGCCAA AATGCCCTTGTTTGTGGGAT 20 20 50.0 45.0 57.9 58.0 0.0 1.8 0.136511 43187 45200 2734-2735 1.000000 78.9 ycf3_p4 ycf3 4 CATACAAAGAGACCCGCCAA ATGCCCTTGTTTGTGGGATT 20 20 50.0 45.0 57.9 58.0 0.0 1.8 0.136511 43187 45200 2733-2734 1.000000 78.9 ycf3_p5 ycf3 5 ACACATACAAAGAGACCCGC ACAAAACGGGCGGTTATTCT 20 20 50.0 45.0 57.9 58.1 0.0 11.0 0.194517 43187 45200 2886-2887 1.000000 78.5 accD_p1 accD 1 AGCAAAACGATACTACGGGT TCGTGTTTTGACTTTGATTCCT 20 22 45.0 36.4 57.0 56.5 0.0 0.0 4.554988 57247 58740 1711-1712 1.000000 43.6 accD_p2 accD 2 AGCAAAACGATACTACGGGTT TCGTGTTTTGACTTTGATTCCT 21 22 42.9 36.4 57.7 56.5 0.0 0.0 4.834086 57247 58740 1711-1712 1.000000 41.3 accD_p3 accD 3 AGCAAAACGATACTACGGGT TTCGTGTTTTGACTTTGATTCCT 20 23 45.0 34.8 57.0 57.2 0.0 0.0 4.872953 57247 58740 1712-1713 1.000000 41.0 accD_p4 accD 4 AGCAAAACGATACTACGGGT AGCGAAATCACTATTTTTCACCA 20 23 45.0 34.8 57.0 57.0 0.0 0.0 5.002496 57247 58740 1680-1681 1.000000 40.0 accD_p5 accD 5 AGCAAAACGATACTACGGGT TCGTGTTTTGACTTTGATTCC 20 21 45.0 38.1 57.0 55.0 0.0 0.0 5.038178 57247 58740 1711-1712 1.000000 40.0 accD-psaI_p1 accD-psaI 1 GGCGTTCTGGGTGAGTTATT CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 57.9 58.0 0.0 26.9 0.136428 58741 59548 947-947 1.000000 79.1 accD-psaI_p2 accD-psaI 2 GGCGTTCTGGGTGAGTTATT TTGCCGGAAATACTAAGCCC 20 20 50.0 50.0 57.9 58.0 0.0 5.0 0.156426 58741 59548 938-938 1.000000 78.9 accD-psaI_p3 accD-psaI 3 GGCGTTCTGGGTGAGTTATT AGAAACCATTGCAATTGCCG 20 20 50.0 45.0 57.9 57.9 0.0 26.9 0.192591 58741 59548 952-952 1.000000 78.6 accD-psaI_p4 accD-psaI 4 TAAAAGGCGTTCTGGGTGAG CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 57.8 58.0 0.0 26.9 0.205915 58741 59548 952-952 1.000000 78.5 accD-psaI_p5 accD-psaI 5 TAAAAGGCGTTCTGGGTGAG TTGCCGGAAATACTAAGCCC 20 20 50.0 50.0 57.8 58.0 0.0 5.0 0.225914 58741 59548 943-943 1.000000 78.4 psbE-petL_p1 psbE-petL 1 CAACCCGCAATGAATAGGGA AGCTGCTAGTAGAAAACCGA 20 20 50.0 45.0 57.9 56.3 6.4 12.5 1.763328 64900 66018 1265-1265 1.000000 66.0 psbE-petL_p2 psbE-petL 2 AGAACGTTCTCCTGTGCTTC AGCTGCTAGTAGAAAACCGA 20 20 50.0 45.0 57.8 56.3 24.9 12.5 1.868337 64900 66018 1188-1188 1.000000 65.1 psbE-petL_p3 psbE-petL 3 ACGAATAACCAACCCGCAAT AGCTGCTAGTAGAAAACCGA 20 20 45.0 45.0 58.2 56.3 0.0 12.5 1.883014 64900 66018 1274-1274 1.000000 65.0 psbE-petL_p4 psbE-petL 4 TGCTGACGAATAACCAACCC AGCTGCTAGTAGAAAACCGA 20 20 50.0 45.0 58.2 56.3 0.0 12.5 1.895919 64900 66018 1279-1279 1.000000 64.9 psbE-petL_p5 psbE-petL 5 CGAATAACCAACCCGCAATG AGCTGCTAGTAGAAAACCGA 20 20 50.0 45.0 57.8 56.3 0.0 12.5 1.899345 64900 66018 1273-1273 1.000000 64.9 rpl16-rps3_p1 rpl16-rps3 1 TCGCCCTGCTTCTATTTGTC CCCTACAAACCATTCGAGCT 20 20 50.0 50.0 58.0 57.6 0.0 0.0 0.427427 81736 82876 1349-1350 1.000000 76.7 rpl16-rps3_p2 rpl16-rps3 2 CGCCCTGCTTCTATTTGTCT CCCTACAAACCATTCGAGCT 20 20 50.0 50.0 58.0 57.6 0.0 0.0 0.433090 81736 82876 1348-1349 1.000000 76.7 rpl16-rps3_p3 rpl16-rps3 3 CTAGATGTGATCCAAGCGGG CCCTACAAACCATTCGAGCT 20 20 55.0 50.0 57.8 57.6 0.0 0.0 0.564074 81736 82876 1330-1331 1.000000 75.6 rpl16-rps3_p4 rpl16-rps3 4 TCGCCCTGCTTCTATTTGTC CCCCTACAAACCATTCGAGC 20 20 50.0 55.0 58.0 58.6 0.0 0.0 0.644649 81736 82876 1350-1351 1.000000 75.0 rpl16-rps3_p5 rpl16-rps3 5 CGCCCTGCTTCTATTTGTCT CCCCTACAAACCATTCGAGC 20 20 50.0 55.0 58.0 58.6 0.0 0.0 0.650312 81736 82876 1349-1350 1.000000 74.9 ndhF-rpl32_p1 ndhF-rpl32 1 CCACATACGGCGCAAATTTT TGCTGCCCAATATCCTTTCT 20 20 45.0 45.0 58.0 56.9 10.8 0.0 1.140675 112295 112667 557-577 1.000000 73.7 ndhF-rpl32_p2 ndhF-rpl32 2 CCACATACGGCGCAAATTTT TGCTGCCCAATATCCTTTCTT 20 21 45.0 42.9 58.0 57.6 10.8 0.0 1.397502 112295 112667 557-577 1.000000 71.6 ndhF-rpl32_p3 ndhF-rpl32 3 CCACATACGGCGCAAATTTT AAAGCTTTTAATGCTGCCCA 20 20 45.0 40.0 58.0 56.5 10.8 5.7 1.530412 112295 112667 568-588 1.000000 70.5 ndhF-rpl32_p4 ndhF-rpl32 4 CCACATACGGCGCAAATTTT AAGCTTTTAATGCTGCCCAA 20 20 45.0 40.0 58.0 56.5 10.8 6.1 1.530412 112295 112667 567-587 1.000000 70.5 ndhF-rpl32_p5 ndhF-rpl32 5 CCACATACGGCGCAAATTTT ATGCTGCCCAATATCCTTTCT 20 21 45.0 42.9 58.0 57.4 10.8 0.0 1.618060 112295 112667 558-578 1.000000 69.9 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 AGAAAGGATATTGGGCAGCA AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 56.9 58.0 0.0 0.0 1.137936 112827 113630 928-936 1.000000 71.5 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 AGAAAGGATATTGGGCAGCA CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 56.9 58.0 0.0 0.0 1.139306 112827 113630 929-937 1.000000 71.5 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AGAAAGGATATTGGGCAGCA TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 56.9 57.9 0.0 0.0 1.254382 112827 113630 938-946 1.000000 70.6 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 AGAAAGGATATTGGGCAGCA CCTAAGAGCAGCGTGTCTAC 20 20 45.0 55.0 56.9 57.8 0.0 0.0 1.326400 112827 113630 937-945 1.000000 70.0 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AGAAAGGATATTGGGCAGCA CTAAGAGCAGCGTGTCTACC 20 20 45.0 55.0 56.9 57.8 0.0 0.0 1.326400 112827 113630 936-944 1.000000 70.0 ndhD_p1 ndhD 1 AGTGTACAAAACCAACAAACT CAAAAACCCGCGCTCAAAAT 21 20 33.3 45.0 54.1 58.5 0.0 5.6 5.443971 115005 116507 1633-1636 1.000000 40.0 ndhD_p2 ndhD 2 AGTGTACAAAACCAACAAACT TTTATCGACAAAAACCCGCG 21 20 33.3 45.0 54.1 57.4 0.0 0.0 5.538905 115005 116507 1641-1644 1.000000 40.0 ndhD_p3 ndhD 3 AAGTGTACAAAACCAACAAACT CAAAAACCCGCGCTCAAAAT 22 20 31.8 45.0 54.9 58.5 0.0 5.6 5.617160 115005 116507 1634-1637 1.000000 40.0 ndhD_p4 ndhD 4 AGTGTACAAAACCAACAAACTT CAAAAACCCGCGCTCAAAAT 22 20 31.8 45.0 54.9 58.5 0.0 5.6 5.617160 115005 116507 1633-1636 1.000000 40.0 ndhD_p5 ndhD 5 AGTGTACAAAACCAACAAACTT TTTATCGACAAAAACCCGCG 22 20 31.8 45.0 54.9 57.4 0.0 0.0 5.712095 115005 116507 1641-1644 1.000000 40.0 trnR-ACG_p1 trnR-ACG 1 ACGCCCAAATTCCATAGCTT AGGCGCTTTCACATCTTCTT 20 20 45.0 45.0 57.9 57.8 0.0 7.6 0.335003 129917 129990 260-260 1.000000 77.6 trnR-ACG_p2 trnR-ACG 2 AAGGCCATTCCATTTCGACA AGGCGCTTTCACATCTTCTT 20 20 45.0 45.0 57.8 57.8 5.0 7.6 0.405504 129917 129990 288-288 1.000000 77.0 trnR-ACG_p3 trnR-ACG 3 AGGCCATTCCATTTCGACAA AGGCGCTTTCACATCTTCTT 20 20 45.0 45.0 57.8 57.8 5.0 7.6 0.405504 129917 129990 287-287 1.000000 77.0 trnR-ACG_p4 trnR-ACG 4 ACGCCCAAATTCCATAGCTT AGAGGCGCTTTCACATCTTC 20 20 45.0 50.0 57.9 58.3 0.0 7.6 0.412156 129917 129990 262-262 1.000000 77.0 trnR-ACG_p5 trnR-ACG 5 ACGCCCAAATTCCATAGCTT GAGGCGCTTTCACATCTTCT 20 20 45.0 50.0 57.9 58.3 0.0 7.6 0.412156 129917 129990 261-261 1.000000 77.0