primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG CCGTAGCGTCTACCGATTTC 20 20 55.0 55.0 57.9 58.2 0.0 10.2 0.381189 46770 47506 797-798 1.000000 82.6 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGAATCGAACCGATGACCAT CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.8 58.2 15.5 10.2 0.488942 46770 47506 829-830 1.000000 81.5 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 AAAATAGGAAAAGGCCGGCT CCGTAGCGTCTACCGATTTC 20 20 45.0 55.0 57.8 58.2 28.6 10.2 0.480165 46770 47506 852-853 1.000000 81.4 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GCGATGCTCTAACCTCTGAG CGTCTACCGATTTCGCCATA 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.543526 46770 47506 791-792 1.000000 81.3 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG GGTTTCCATACCAAGGCTCA 20 20 55.0 50.0 57.9 57.5 0.0 0.0 0.640147 46770 47506 829-830 1.000000 80.3 petB-petD_p1 petB-petD 1 GCCGCTTCTTACTGCTGTAT GTTCAAGTCACACACTCCCA 20 20 50.0 50.0 58.1 57.7 4.1 0.0 0.384258 77290 77482 290-290 1.000000 81.6 petB-petD_p2 petB-petD 2 GCCGCTTCTTACTGCTGTAT GTTACACGGTGGTTGGAACA 20 20 50.0 50.0 58.1 58.3 4.1 13.5 0.392621 77290 77482 371-371 1.000000 80.5 petB-petD_p3 petB-petD 3 GCCGCTTCTTACTGCTGTAT ATAGGGGTTACACGGTGGTT 20 20 50.0 50.0 58.1 58.3 4.1 13.5 0.398433 77290 77482 377-377 1.000000 80.4 petB-petD_p4 petB-petD 4 GCCGCTTCTTACTGCTGTAT AGTTCAAGTCACACACTCCC 20 20 50.0 50.0 58.1 57.4 4.1 0.0 0.680739 77290 77482 291-291 1.000000 79.2 petB-petD_p5 petB-petD 5 GCCGCTTCTTACTGCTGTAT TATAGGGGTTACACGGTGGT 20 20 50.0 50.0 58.1 57.5 4.1 13.5 0.607139 77290 77482 378-378 1.000000 78.7 ycf1_p1 ycf1 1 AGGAAGCACCAAACCAATCA ACATACTGAAACGACTGCCA 20 20 45.0 45.0 57.6 57.2 3.0 0.0 1.211749 114940 115059 415-415 0.500000 50.3 ycf1_p2 ycf1 2 AAGAGGAAGCACCAAACCAA ACATACTGAAACGACTGCCA 20 20 45.0 45.0 57.5 57.2 3.0 0.0 1.284285 114940 115059 418-418 0.500000 49.7 ycf1_p3 ycf1 3 CATTCGTCTGTCTGTCCCAA ACATACTGAAACGACTGCCA 20 20 50.0 45.0 57.5 57.2 0.0 0.0 1.287359 114940 115059 488-488 0.500000 49.7 ycf1_p4 ycf1 4 AACCCATTCGTCTGTCTGTC ACATACTGAAACGACTGCCA 20 20 50.0 45.0 57.5 57.2 0.0 0.0 1.289051 114940 115059 492-492 0.500000 49.7 ycf1_p5 ycf1 5 GAACCCATTCGTCTGTCTGT ACATACTGAAACGACTGCCA 20 20 50.0 45.0 57.5 57.2 0.0 0.0 1.289051 114940 115059 493-493 0.500000 49.7 ycf1-rps15_p1 ycf1-rps15 1 AGCAGCCAAGTTTCACATGA CAGCAGTCGTTGACGTTTTC 20 20 45.0 50.0 58.0 58.0 0.0 3.2 0.019715 115158 115549 788-788 0.500000 59.8 ycf1-rps15_p2 ycf1-rps15 2 AGCAGCCAAGTTTCACATGA TCCCAACGCGTTACATAAGG 20 20 45.0 50.0 58.0 58.0 0.0 26.1 0.027464 115158 115549 1177-1177 0.500000 59.8 ycf1-rps15_p3 ycf1-rps15 3 AGCAGCCAAGTTTCACATGA AGTCGTTGACGTTTTCCCAA 20 20 45.0 45.0 58.0 58.0 0.0 3.2 0.041530 115158 115549 784-784 0.500000 59.7 ycf1-rps15_p4 ycf1-rps15 4 AGCAGCCAAGTTTCACATGA CCGAGTCATTCTTCCATGCA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.042947 115158 115549 956-956 0.500000 59.7 ycf1-rps15_p5 ycf1-rps15 5 GCAGCCAAGTTTCACATGAC CAGCAGTCGTTGACGTTTTC 20 20 50.0 50.0 57.9 58.0 0.0 3.2 0.061283 115158 115549 787-787 0.500000 59.5 rps15_p1 rps15 1 AGCAGCCAAGTTTCACATGA TCCCAACGCGTTACATAAGG 20 20 45.0 50.0 58.0 58.0 0.0 26.1 0.027464 115550 115822 1177-1177 0.500000 59.8 rps15_p2 rps15 2 AGCAGCCAAGTTTCACATGA CCGAGTCATTCTTCCATGCA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.042947 115550 115822 956-956 0.500000 59.7 rps15_p3 rps15 3 GCAGCCAAGTTTCACATGAC TCCCAACGCGTTACATAAGG 20 20 50.0 50.0 57.9 58.0 0.0 26.1 0.069031 115550 115822 1176-1176 0.500000 59.4 rps15_p4 rps15 4 AGCAGCCAAGTTTCACATGA AACACCATGCATTGATGGGT 20 20 45.0 45.0 58.0 58.1 0.0 8.9 0.073150 115550 115822 1040-1040 0.500000 59.4 rps15_p5 rps15 5 CAGCAGCCAAGTTTCACATG TCCCAACGCGTTACATAAGG 20 20 50.0 50.0 57.9 58.0 0.0 26.1 0.073263 115550 115822 1178-1178 0.500000 59.4 ndhH_p1 ndhH 1 GAAAACGTCAACGACTGCTG TGAAGAATTCCCAAAGGCCC 20 20 50.0 50.0 58.0 58.1 9.9 0.0 0.067997 115919 117100 1601-1601 0.500000 59.5 ndhH_p2 ndhH 2 GAAAACGTCAACGACTGCTG GCTATGGAGGGACCGATACT 20 20 50.0 55.0 58.0 58.1 9.9 0.0 0.079080 115919 117100 1694-1694 0.500000 59.4 ndhH_p3 ndhH 3 GAAAACGTCAACGACTGCTG CTGCTATGGAGGGACCGATA 20 20 50.0 55.0 58.0 58.1 9.9 0.0 0.080457 115919 117100 1696-1696 0.500000 59.4 ndhH_p4 ndhH 4 TTGGGAAAACGTCAACGACT TGAAGAATTCCCAAAGGCCC 20 20 45.0 50.0 58.0 58.1 9.9 0.0 0.089812 115919 117100 1605-1605 0.500000 59.3 ndhH_p5 ndhH 5 TGCATGGAAGAATGACTCGG TGAAGAATTCCCAAAGGCCC 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.091229 115919 117100 1433-1433 0.500000 59.3 ndhA_p1 ndhA 1 CAGGCTCTGGAAGGAATTCC TTCCAATCAACAACCGGGAG 20 20 55.0 50.0 58.0 58.1 17.3 6.3 0.145601 117102 119284 2868-2868 0.500000 58.8 ndhA_p2 ndhA 2 CAGGCTCTGGAAGGAATTCC TGGCAGCTCGTATTGTTTGT 20 20 55.0 45.0 58.0 58.1 17.3 0.0 0.159012 117102 119284 2675-2675 0.500000 58.7 ndhA_p3 ndhA 3 CAGGCTCTGGAAGGAATTCC CCAATCAACAACCGGGAGAT 20 20 55.0 50.0 58.0 57.9 17.3 6.3 0.178659 117102 119284 2866-2866 0.500000 58.6 ndhA_p4 ndhA 4 AGAGTCGAAGCACCAAAAGG TTCCAATCAACAACCGGGAG 20 20 50.0 50.0 58.1 58.1 0.0 6.3 0.211478 117102 119284 2712-2712 0.500000 58.3 ndhA_p5 ndhA 5 AGTCGAAGCACCAAAAGGAG TTCCAATCAACAACCGGGAG 20 20 50.0 50.0 58.1 58.1 0.0 6.3 0.211478 117102 119284 2710-2710 0.500000 58.3 ndhI_p1 ndhI 1 CTCTAGCCGAGTGTGAGAGA TGAAAGGGTGGTGTGGATTG 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.037302 119364 119870 1255-1255 0.500000 59.7 ndhI_p2 ndhI 2 CTCTAGCCGAGTGTGAGAGA TGAATGAAAGGGTGGTGTGG 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.037302 119364 119870 1259-1259 0.500000 59.7 ndhI_p3 ndhI 3 TCTCTAGCCGAGTGTGAGAG TGAAAGGGTGGTGTGGATTG 20 20 55.0 50.0 58.0 58.0 1.1 0.0 0.037302 119364 119870 1256-1256 0.500000 59.7 ndhI_p4 ndhI 4 TCTCTAGCCGAGTGTGAGAG TGAATGAAAGGGTGGTGTGG 20 20 55.0 50.0 58.0 58.0 1.1 0.0 0.037302 119364 119870 1260-1260 0.500000 59.7 ndhI_p5 ndhI 5 TGTTCCGGAGCTTTTTGACA TGAAAGGGTGGTGTGGATTG 20 20 45.0 50.0 58.0 58.0 19.7 0.0 0.051605 119364 119870 1059-1059 0.500000 59.6 ndhI-ndhG_p1 ndhI-ndhG 1 CTCCCGGTTGTTGATTGGAA CGCAGCAGCTACAAAATACG 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.172868 119871 120219 808-808 0.500000 58.6 ndhI-ndhG_p2 ndhI-ndhG 2 ACAAACAATACGAGCTGCCA CGCAGCAGCTACAAAATACG 20 20 45.0 50.0 58.1 57.9 0.0 0.0 0.186279 119871 120219 1001-1001 0.500000 58.5 ndhI-ndhG_p3 ndhI-ndhG 3 CTCCCGGTTGTTGATTGGAA CCCAACGGTCCAAAGATGAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.191426 119871 120219 913-913 0.500000 58.5 ndhI-ndhG_p4 ndhI-ndhG 4 CTCCCGGTTGTTGATTGGAA ATGATCCCATACCAGGACGT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.198867 119871 120219 996-996 0.500000 58.4 ndhI-ndhG_p5 ndhI-ndhG 5 ACAAACAATACGAGCTGCCA CCCAACGGTCCAAAGATGAA 20 20 45.0 50.0 58.1 58.1 0.0 0.0 0.204837 119871 120219 1106-1106 0.500000 58.4 ndhG_p1 ndhG 1 CAATCCACACCACCCTTTCA AATAGCCGGGCCAATAGTTG 20 20 50.0 50.0 58.0 58.0 0.0 17.0 0.024788 120220 120750 1115-1115 0.500000 59.8 ndhG_p2 ndhG 2 CAATCCACACCACCCTTTCA CAATAGCCGGGCCAATAGTT 20 20 50.0 50.0 58.0 58.0 0.0 17.0 0.024788 120220 120750 1116-1116 0.500000 59.8 ndhG_p3 ndhG 3 CCACACCACCCTTTCATTCA AACAATAGCCGGGCCAATAG 20 20 50.0 50.0 58.0 58.0 0.0 17.0 0.024788 120220 120750 1114-1114 0.500000 59.8 ndhG_p4 ndhG 4 CCACACCACCCTTTCATTCA AATAGCCGGGCCAATAGTTG 20 20 50.0 50.0 58.0 58.0 0.0 17.0 0.024788 120220 120750 1111-1111 0.500000 59.8 ndhG_p5 ndhG 5 CCACACCACCCTTTCATTCA CAATAGCCGGGCCAATAGTT 20 20 50.0 50.0 58.0 58.0 0.0 17.0 0.024788 120220 120750 1112-1112 0.500000 59.8 ndhE-psaC_p1 ndhE-psaC 1 AACTATTGGCCCGGCTATTG TACATCCGTCCCAGGGTATC 20 20 50.0 55.0 58.0 58.0 9.9 5.0 0.024114 121273 121522 438-438 0.500000 59.8 ndhE-psaC_p2 ndhE-psaC 2 CAACTATTGGCCCGGCTATT TACATCCGTCCCAGGGTATC 20 20 50.0 55.0 58.0 58.0 9.9 5.0 0.024114 121273 121522 439-439 0.500000 59.8 ndhE-psaC_p3 ndhE-psaC 3 CTATTGGCCCGGCTATTGTT TACATCCGTCCCAGGGTATC 20 20 50.0 55.0 58.0 58.0 9.9 5.0 0.024114 121273 121522 436-436 0.500000 59.8 ndhE-psaC_p4 ndhE-psaC 4 ACGTCCTGGTATGGGATCAT TACATCCGTCCCAGGGTATC 20 20 50.0 55.0 57.9 58.0 0.0 5.0 0.108524 121273 121522 1055-1055 0.500000 59.1 ndhE-psaC_p5 ndhE-psaC 5 CTATTGGCCCGGCTATTGTT GACCCATACTGCGAGTTGTT 20 20 50.0 50.0 58.0 57.9 9.9 0.0 0.113506 121273 121522 568-568 0.500000 59.1 ndhD_p1 ndhD 1 GATACCCTGGGACGGATGTA TTTGTGTGAACTGGCGAGAA 20 20 55.0 45.0 58.0 58.0 22.2 1.4 0.036629 121880 123400 1979-1979 0.500000 59.7 ndhD_p2 ndhD 2 AACTATTGGCCCGGCTATTG TTTGTGTGAACTGGCGAGAA 20 20 50.0 45.0 58.0 58.0 9.9 1.4 0.050002 121880 123400 2397-2397 0.500000 59.6 ndhD_p3 ndhD 3 CAACTATTGGCCCGGCTATT TTTGTGTGAACTGGCGAGAA 20 20 50.0 45.0 58.0 58.0 9.9 1.4 0.050002 121880 123400 2398-2398 0.500000 59.6 ndhD_p4 ndhD 4 CTATTGGCCCGGCTATTGTT TTTGTGTGAACTGGCGAGAA 20 20 50.0 45.0 58.0 58.0 9.9 1.4 0.050002 121880 123400 2395-2395 0.500000 59.6 ndhD_p5 ndhD 5 GATACCCTGGGACGGATGTA TTGGAGTTGGGACCCAAAAG 20 20 55.0 50.0 58.0 57.9 22.2 27.9 0.086024 121880 123400 2257-2257 0.500000 59.3 ndhD-ccsA_p1 ndhD-ccsA 1 TCAGTAGCTTTTCGATGGCC CCGCCCTTTTATGTGGATCA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.075510 123401 123648 1155-1155 0.500000 59.4 ndhD-ccsA_p2 ndhD-ccsA 2 CAGTAGCTTTTCGATGGCCT CCGCCCTTTTATGTGGATCA 20 20 50.0 50.0 58.0 57.9 3.3 0.0 0.081173 123401 123648 1154-1154 0.500000 59.4 ndhD-ccsA_p3 ndhD-ccsA 3 TTGGTTGATGATGGTAGGCG CCGCCCTTTTATGTGGATCA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.088292 123401 123648 1454-1454 0.500000 59.3 ndhD-ccsA_p4 ndhD-ccsA 4 TCAGTAGCTTTTCGATGGCC TTGGAGTTGGGACCCAAAAG 20 20 50.0 50.0 58.0 57.9 0.0 27.9 0.104830 123401 123648 833-833 0.500000 59.2 ndhD-ccsA_p5 ndhD-ccsA 5 CAGTAGCTTTTCGATGGCCT TTGGAGTTGGGACCCAAAAG 20 20 50.0 50.0 58.0 57.9 3.3 27.9 0.110492 123401 123648 832-832 0.500000 59.1 ccsA_p1 ccsA 1 TCAGTAGCTTTTCGATGGCC GCGGCATGTCATCTCCTAAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.070617 123649 124626 1686-1686 0.500000 59.4 ccsA_p2 ccsA 2 CAGTAGCTTTTCGATGGCCT GCGGCATGTCATCTCCTAAA 20 20 50.0 50.0 58.0 58.0 3.3 0.0 0.076279 123649 124626 1685-1685 0.500000 59.4 ccsA_p3 ccsA 3 TTCTCGCCAGTTCACACAAA GCGGCATGTCATCTCCTAAA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.077699 123649 124626 1151-1151 0.500000 59.4 ccsA_p4 ccsA 4 TCAGTAGCTTTTCGATGGCC GAGTTCAAGACAAGCCGCTA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.104462 123649 124626 1773-1773 0.500000 59.2 ccsA_p5 ccsA 5 CAGTAGCTTTTCGATGGCCT GAGTTCAAGACAAGCCGCTA 20 20 50.0 50.0 58.0 57.9 3.3 0.0 0.110124 123649 124626 1772-1772 0.500000 59.1 trnL-UAG-ndhF_p1 trnL-UAG-ndhF 1 TTTAGGAGATGACATGCCGC TGAAGTGGAAATTGTGCCGA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.072176 124790 126366 2411-2411 0.500000 59.4 trnL-UAG-ndhF_p2 trnL-UAG-ndhF 2 TGATCCACATAAAAGGGCGG TGAAGTGGAAATTGTGCCGA 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.077069 124790 126366 2942-2942 0.500000 59.4 trnL-UAG-ndhF_p3 trnL-UAG-ndhF 3 TTTAGGAGATGACATGCCGC GCCCACATACGACGAAGATT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.110509 124790 126366 1793-1793 0.500000 59.1 trnL-UAG-ndhF_p4 trnL-UAG-ndhF 4 GAAGTAGCAAAGCCTTGGGT TGAAGTGGAAATTGTGCCGA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.114678 124790 126366 2824-2824 0.500000 59.1 trnL-UAG-ndhF_p5 trnL-UAG-ndhF 5 TGATCCACATAAAAGGGCGG GCCCACATACGACGAAGATT 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.115402 124790 126366 2324-2324 0.500000 59.1 ndhF_p1 ndhF 1 AAAGAGGTAAGGTCCGGTGA ATGCCGTCACCCATTCTTAC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.058194 126367 128604 2672-2672 0.500000 59.5 ndhF_p2 ndhF 2 AAGAGGTAAGGTCCGGTGAA ATGCCGTCACCCATTCTTAC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.058194 126367 128604 2671-2671 0.500000 59.5 ndhF_p3 ndhF 3 AAAGAGGTAAGGTCCGGTGA AAGTGAGGAAGAAAGCGTGG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.135572 126367 128604 2610-2610 0.500000 58.9 ndhF_p4 ndhF 4 AAGAGGTAAGGTCCGGTGAA AAGTGAGGAAGAAAGCGTGG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.135572 126367 128604 2609-2609 0.500000 58.9 ndhF_p5 ndhF 5 AAGAGGTAAGGTCCGGTGAA GTGAGGAAGAAAGCGTGGAA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.140854 126367 128604 2607-2607 0.500000 58.9