primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnR-UCU-atpA_p1 trnR-UCU-atpA 1 AGCCTTCCAAGCTAACGATG TTGGGTCTGCAGCTCAAATT 20 20 50.0 45.0 58.0 58.0 0.0 17.5 0.030190 10128 10240 799-805 1.000000 85.0 trnR-UCU-atpA_p2 trnR-UCU-atpA 2 CCTAGCCTTCCAAGCTAACG TTGGGTCTGCAGCTCAAATT 20 20 55.0 45.0 58.1 58.0 0.0 17.5 0.059027 10128 10240 802-808 1.000000 84.7 trnR-UCU-atpA_p3 trnR-UCU-atpA 3 AGCCTTCCAAGCTAACGATG TTGGATTTGGCGCAATTGAC 20 20 50.0 45.0 58.0 57.9 0.0 10.8 0.107251 10128 10240 746-752 1.000000 84.6 trnR-UCU-atpA_p4 trnR-UCU-atpA 4 CCTAGCCTTCCAAGCTAACG TTGGATTTGGCGCAATTGAC 20 20 55.0 45.0 58.1 57.9 0.0 10.8 0.136088 10128 10240 749-755 1.000000 84.3 trnR-UCU-atpA_p5 trnR-UCU-atpA 5 AAATGCTGACTTGACGTCGA TTGGGTCTGCAGCTCAAATT 20 20 45.0 45.0 57.9 58.0 11.6 17.5 0.149267 10128 10240 830-836 1.000000 83.8 atpF-atpH_p1 atpF-atpH 1 GTACAGCTGGTTGGATCCTG GGGTCGGAACAAAGAAAGGT 20 20 55.0 50.0 58.0 58.0 19.9 0.0 0.052782 13120 13540 1092-1092 0.200000 47.6 atpF-atpH_p2 atpF-atpH 2 GTACAGCTGGTTGGATCCTG TGGGTCGGAACAAAGAAAGG 20 20 55.0 50.0 58.0 58.0 19.9 0.0 0.054179 13120 13540 1093-1093 0.200000 47.6 atpF-atpH_p3 atpF-atpH 3 AGTACAGCTGGTTGGATCCT GGGTCGGAACAAAGAAAGGT 20 20 50.0 50.0 58.0 58.0 19.9 0.0 0.064656 13120 13540 1093-1093 0.200000 47.5 atpF-atpH_p4 atpF-atpH 4 AGTACAGCTGGTTGGATCCT TGGGTCGGAACAAAGAAAGG 20 20 50.0 50.0 58.0 58.0 19.9 0.0 0.066052 13120 13540 1094-1094 0.200000 47.5 atpF-atpH_p5 atpF-atpH 5 GTACAGCTGGTTGGATCCTG ATTTCTGCCGCTTCCGTTAT 20 20 55.0 45.0 58.0 58.0 19.9 0.0 0.068225 13120 13540 847-847 0.200000 47.5 rpl2-rps19_p1 rpl2-rps19 1 TGGGTAGAGCCGGATCTAAG TCTTCAGGCTAGTACCCTCG 20 20 55.0 55.0 58.0 57.9 29.9 0.0 0.057434 16642 16700 881-885 1.000000 83.0 rpl2-rps19_p2 rpl2-rps19 2 TGGGTAGAGCCGGATCTAAG CTAGAAGGTGGCGAGCATTT 20 20 55.0 50.0 58.0 58.0 29.9 0.0 0.033040 16642 16700 818-818 0.200000 47.7 rpl2-rps19_p3 rpl2-rps19 3 GATGACGGAAGGGAAAGACC CTAGAAGGTGGCGAGCATTT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.055427 16642 16700 1257-1257 0.200000 47.6 rpl2-rps19_p4 rpl2-rps19 4 CCAGATGACGGAAGGGAAAG CTAGAAGGTGGCGAGCATTT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.059677 16642 16700 1260-1260 0.200000 47.5 rpl2-rps19_p5 rpl2-rps19 5 GATGACGGAAGGGAAAGACC TCTTCAGGCTAGTACCCTCG 20 20 55.0 55.0 58.0 57.9 0.0 0.0 0.079821 16642 16700 1320-1320 0.200000 47.4 psbB-trnV-GAC_p1 psbB-trnV-GAC 1 ACACCCATATTCCAGGACCA ACCTTGTCTATTTGGCGTCC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.129615 28668 29413 1868-1868 0.600000 63.3 psbB-trnV-GAC_p2 psbB-trnV-GAC 2 TGCACCAAAACCAAAGCAAG ACCTTGTCTATTTGGCGTCC 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.130780 28668 29413 1828-1828 0.600000 63.3 psbB-trnV-GAC_p3 psbB-trnV-GAC 3 CCCCGCGAGAAATAAATGGA ACCTTGTCTATTTGGCGTCC 20 20 50.0 50.0 58.0 57.9 8.2 0.0 0.147631 28668 29413 1804-1804 0.600000 63.2 psbB-trnV-GAC_p4 psbB-trnV-GAC 4 ACACCCATATTCCAGGACCA CCCCCAAATCCGTTTACCAT 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.173224 28668 29413 1808-1808 0.600000 63.0 psbB-trnV-GAC_p5 psbB-trnV-GAC 5 CCAACCACCCCATGAATTGA ACCTTGTCTATTTGGCGTCC 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.173625 28668 29413 1597-1597 0.600000 62.9 trnV-GAC-rpl20_p1 trnV-GAC-rpl20 1 CTTCGGGGATTCGTTCAGAG TATCCCCGGCTAATTCTCGT 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.077475 29486 31538 2527-2808 0.800000 83.4 trnV-GAC-rpl20_p2 trnV-GAC-rpl20 2 GATTCGTTCAGAGCAAGGGT TATCCCCGGCTAATTCTCGT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.105975 29486 31538 2520-2801 0.800000 83.2 trnV-GAC-rpl20_p3 trnV-GAC-rpl20 3 TACGCAATGGGAAGGTTGAG TATCCCCGGCTAATTCTCGT 20 20 50.0 50.0 57.9 58.0 3.8 0.0 0.113320 29486 31538 2402-2683 0.800000 83.1 trnV-GAC-rpl20_p4 trnV-GAC-rpl20 4 TGGTTCATCATTCCAAGGGC TATCCCCGGCTAATTCTCGT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.154066 29486 31538 2363-2644 0.800000 82.8 trnV-GAC-rpl20_p5 trnV-GAC-rpl20 5 GTTCATCATTCCAAGGGCCT TATCCCCGGCTAATTCTCGT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.155343 29486 31538 2361-2642 0.800000 82.8 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 38846 39595 800-818 1.000000 87.5 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GACTCGAACCGATGACCATC ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 58.2 58.0 0.0 0.0 0.163174 38846 39595 831-849 1.000000 86.9 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 38846 39595 808-826 1.000000 86.8 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GACTCGAACCGATGACCATC TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 58.2 58.1 0.0 0.0 0.227983 38846 39595 839-857 1.000000 86.3 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG AGTCCGTAGCGTCTACCAAT 20 20 55.0 50.0 57.9 58.2 0.0 10.2 0.372548 38846 39595 814-832 1.000000 85.4 trnV-UAC-trnM-CAU_p1 trnV-UAC-trnM-CAU 1 TGTGCATTGGGCTCTTTCAT GATCTGAAAGTCGATCCGGG 20 20 45.0 55.0 58.1 57.9 0.0 0.0 0.214048 44366 44561 1434-1442 1.000000 84.3 trnV-UAC-trnM-CAU_p2 trnV-UAC-trnM-CAU 2 TTTTTGAGGCCCTTCGACTC TCTAAAAACCATTGCGGGCT 20 20 50.0 45.0 58.1 58.1 0.0 0.0 0.189918 44366 44561 1086-1094 0.600000 69.3 trnV-UAC-trnM-CAU_p3 trnV-UAC-trnM-CAU 3 TGTGCATTGGGCTCTTTCAT TCTAAAAACCATTGCGGGCT 20 20 45.0 45.0 58.1 58.1 0.0 0.0 0.154641 44366 44561 1355-1363 0.600000 68.8 trnV-UAC-trnM-CAU_p4 trnV-UAC-trnM-CAU 4 TGTGCATTGGGCTCTTTCAT AAACCATTGCGGGCTTTAGA 20 20 45.0 45.0 58.1 58.1 0.0 0.0 0.154641 44366 44561 1358-1358 0.200000 46.8 trnV-UAC-trnM-CAU_p5 trnV-UAC-trnM-CAU 5 TTTTTGAGGCCCTTCGACTC AAACCATTGCGGGCTTTAGA 20 20 50.0 45.0 58.1 58.1 0.0 0.0 0.189918 44366 44561 1089-1089 0.200000 46.5 trnM-CAU-trnM-CAU_p1 trnM-CAU-trnM-CAU 1 TATTGCTTTCATACGGCGGG TGGCGAATTCGTAGGTTCAA 20 20 50.0 45.0 58.4 57.5 13.2 27.2 0.870386 44635 44863 307-319 1.000000 82.5 trnM-CAU-trnM-CAU_p2 trnM-CAU-trnM-CAU 2 TATTGCTTTCATACGGCGGG TTGGCGAATTCGTAGGTTCA 20 20 50.0 45.0 58.4 57.5 13.2 27.2 0.870386 44635 44863 308-320 1.000000 82.5 trnM-CAU-trnM-CAU_p3 trnM-CAU-trnM-CAU 3 TATTGCTTTCATACGGCGGG GCACCCAACTCATAATTGGC 20 20 50.0 50.0 58.4 57.4 13.2 0.0 0.995818 44635 44863 323-335 1.000000 81.0 trnM-CAU-trnM-CAU_p4 trnM-CAU-trnM-CAU 4 TATTGCTTTCATACGGCGGG GCTGAATGGTTAAAGCACCC 20 20 50.0 50.0 58.4 57.3 13.2 0.0 1.066075 44635 44863 337-349 1.000000 80.1 trnM-CAU-trnM-CAU_p5 trnM-CAU-trnM-CAU 5 TATTGCTTTCATACGGCGGG GGCTGAATGGTTAAAGCACC 20 20 50.0 50.0 58.4 57.3 13.2 0.0 1.066075 44635 44863 338-350 1.000000 80.1 trnE-UUC-trnY-GUA_p1 trnE-UUC-trnY-GUA 1 TCTCTTTCAAGGAGGCAACG CCAGCGTAGACATATTGCCA 20 20 50.0 50.0 57.8 57.8 0.0 0.0 0.408774 56290 56348 167-167 1.000000 80.1 trnE-UUC-trnY-GUA_p2 trnE-UUC-trnY-GUA 2 TCTCTTTCAAGGAGGCAACG ACCAGCGTAGACATATTGCC 20 20 50.0 50.0 57.8 57.8 0.0 0.0 0.410326 56290 56348 168-168 1.000000 80.1 trnE-UUC-trnY-GUA_p3 trnE-UUC-trnY-GUA 3 TCTCTTTCAAGGAGGCAACG CGAATTTACAGTCCGTCCCC 20 20 50.0 55.0 57.8 58.4 0.0 0.0 0.521328 56290 56348 146-146 1.000000 79.7 trnE-UUC-trnY-GUA_p4 trnE-UUC-trnY-GUA 4 TCTCTTTCAAGGAGGCAACG CCATCGCATGGTAGATTGGT 20 20 50.0 50.0 57.8 57.7 0.0 0.0 0.430676 56290 56348 214-214 1.000000 79.2 trnE-UUC-trnY-GUA_p5 trnE-UUC-trnY-GUA 5 TCGTCTAGTGGTTCAGGACA CCAGCGTAGACATATTGCCA 20 20 50.0 50.0 57.7 57.8 0.0 0.0 0.520481 56290 56348 189-189 1.000000 78.8 trnD-GUC-psbJ_p1 trnD-GUC-psbJ 1 CATCCCCCATTCCCAGATTG GCGAAAAAGAAAGGGCTTCC 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.071363 56607 58294 2343-2640 0.800000 79.0 trnD-GUC-psbJ_p2 trnD-GUC-psbJ 2 CATCCCCCATTCCCAGATTG TTCCTTCCCCTTTTTCGCAA 20 20 55.0 45.0 58.0 57.9 0.0 0.0 0.080099 56607 58294 2327-2624 0.800000 78.9 trnD-GUC-psbJ_p3 trnD-GUC-psbJ 3 CATCCCCCATTCCCAGATTG CTTTTTCGCAACGCTTCCTT 20 20 55.0 45.0 58.0 57.9 0.0 0.0 0.125042 56607 58294 2318-2615 0.800000 78.6 trnD-GUC-psbJ_p4 trnD-GUC-psbJ 4 ATCCCCCATTCCCAGATTGA GCGAAAAAGAAAGGGCTTCC 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.140369 56607 58294 2342-2639 0.800000 78.5 trnD-GUC-psbJ_p5 trnD-GUC-psbJ 5 TCCCCCATTCCCAGATTGAT GCGAAAAAGAAAGGGCTTCC 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.140369 56607 58294 2341-2638 0.800000 78.5 ndhB-trnM-CAU_p1 ndhB-trnM-CAU 1 TTGCTCAGGATACCCTTTTT CCTGTTAAGCATCCATGGCT 20 20 40.0 50.0 54.5 57.9 0.0 7.0 3.554923 93840 94329 595-1066 1.000000 62.3 ndhB-trnM-CAU_p2 ndhB-trnM-CAU 2 ATTGCTCAGGATACCCTTTT CCTGTTAAGCATCCATGGCT 20 20 40.0 50.0 54.3 57.9 0.0 7.0 3.799408 93840 94329 596-1067 1.000000 60.4 ndhB-trnM-CAU_p3 ndhB-trnM-CAU 3 ATTGCTCAGGATACCCTTTTT CCTGTTAAGCATCCATGGCT 21 20 38.1 50.0 55.1 57.9 0.0 7.0 3.926497 93840 94329 596-1067 1.000000 59.4 ndhB-trnM-CAU_p4 ndhB-trnM-CAU 4 TTGCTCAGGATACCCTTTTT TGGCGAATTCGTAGGTTCAA 20 20 40.0 45.0 54.5 57.5 0.0 27.2 3.951013 93840 94329 548-1019 1.000000 59.4 ndhB-trnM-CAU_p5 ndhB-trnM-CAU 5 TTGCTCAGGATACCCTTTTT TTGGCGAATTCGTAGGTTCA 20 20 40.0 45.0 54.5 57.5 0.0 27.2 3.951013 93840 94329 549-1020 1.000000 59.4 trnM-CAU-trnL-CAA_p1 trnM-CAU-trnL-CAA 1 AAAGCGCGATTCTTGAGGAT CCTCCCCCGTTTGTACAAAA 20 20 45.0 50.0 58.0 58.0 11.2 22.1 0.045772 95700 95819 1677-1707 0.800000 76.3 trnM-CAU-trnL-CAA_p2 trnM-CAU-trnL-CAA 2 AAAGCGCGATTCTTGAGGAT AAGAGGTCCTTCATCAGGCT 20 20 45.0 50.0 58.0 58.0 11.2 0.0 0.065853 95700 95819 1216-1246 0.800000 76.3 trnM-CAU-trnL-CAA_p3 trnM-CAU-trnL-CAA 3 AAAGCGCGATTCTTGAGGAT TGAAGATCAGCGAACCATGG 20 20 45.0 50.0 58.0 58.0 11.2 11.2 0.058258 95700 95819 865-1057 0.800000 72.7 trnM-CAU-trnL-CAA_p4 trnM-CAU-trnL-CAA 4 AAAGCGCGATTCTTGAGGAT AAGATCAGCGAACCATGGAC 20 20 45.0 50.0 58.0 58.0 11.2 21.5 0.059677 95700 95819 863-1055 0.800000 72.6 trnM-CAU-trnL-CAA_p5 trnM-CAU-trnL-CAA 5 CTGGGACGATCAAGAATGCA CCTCCCCCGTTTGTACAAAA 20 20 50.0 50.0 58.0 58.0 0.0 22.1 0.044354 95700 95819 2070-2070 0.600000 64.7 rps12-ndhH_p1 rps12-ndhH 1 TTTGACCCTAAGCACCCAAC TAAGCCAGCACTTTGAAGCA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.030439 124541 124660 2075-2075 0.600000 63.8 rps12-ndhH_p2 rps12-ndhH 2 TTTGACCCTAAGCACCCAAC TGCCCTTATGATTTCAGGCC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.082071 124541 124660 2726-2726 0.600000 63.3 rps12-ndhH_p3 rps12-ndhH 3 CTGAAGTAACCCATGCCACA TCATAAACAGCTAACAAGTCCTC 20 23 50.0 39.1 57.8 56.3 0.0 0.0 4.905706 124396 124995 644-644 0.600000 24.8 rps12-ndhH_p4 rps12-ndhH 4 CTGAAGTAACCCATGCCACA TCATAAACAGCTAACAAGTCCT 20 22 50.0 36.4 57.8 55.1 0.0 0.0 5.089411 124396 124995 644-644 0.600000 24.0 rps12-ndhH_p5 rps12-ndhH 5 CTGAAGTAACCCATGCCACA CATAAACAGCTAACAAGTCCTC 20 22 50.0 40.9 57.8 54.9 0.0 0.0 5.341536 124396 124995 643-643 0.600000 24.0 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GTAGGCCAATTCTTACCGCA AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 58.0 58.0 5.0 0.0 0.040511 135437 136019 1130-1147 0.800000 75.2 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 TGTAGGCCAATTCTTACCGC AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 58.0 58.0 5.0 0.0 0.040511 135437 136019 1131-1148 0.800000 75.2 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GTAGGCCAATTCTTACCGCA CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 58.0 58.0 5.0 0.0 0.041881 135437 136019 1131-1148 0.800000 75.2 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 TGTAGGCCAATTCTTACCGC CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 58.0 58.0 5.0 0.0 0.041881 135437 136019 1132-1149 0.800000 75.2 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GTAGGCCAATTCTTACCGCA CACAGAAGAGCCGCATAACT 20 20 50.0 50.0 58.0 58.0 5.0 0.0 0.048416 135437 136019 1748-1750 0.600000 63.6 ccsA-ndhD_p1 ccsA-ndhD 1 GGGTATTCTTTCGGGAGCAG AACGAAATGGGTGGAGTAGC 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.154498 137151 137423 967-1014 1.000000 86.4 ccsA-ndhD_p2 ccsA-ndhD 2 ACCCAAGGCTTTGCTACTTC AACGAAATGGGTGGAGTAGC 20 20 50.0 50.0 58.1 57.9 2.4 0.0 0.198367 137151 137423 1335-1382 1.000000 85.1 ccsA-ndhD_p3 ccsA-ndhD 3 AGTTATGCGGCTCTTCTGTG AACGAAATGGGTGGAGTAGC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.125161 137151 137423 1224-1246 0.800000 77.0 ccsA-ndhD_p4 ccsA-ndhD 4 AGTTATGCGGCTCTTCTGTG CCTTTTCGATGGCTTCCCTT 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.176312 137151 137423 1169-1191 0.800000 76.6 ccsA-ndhD_p5 ccsA-ndhD 5 AAATTCTGCAATTGTGGCCG AACGAAATGGGTGGAGTAGC 20 20 45.0 50.0 57.9 57.9 7.4 0.0 0.192591 137151 137423 823-870 0.800000 73.0 ndhH-rps12_p1 ndhH-rps12 1 CCCAAGGTGTTTAGCAAGGT ATTGAAAAACAGACCGCCCT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.009247 154223 154472 1368-1399 1.000000 90.3 ndhH-rps12_p2 ndhH-rps12 2 GTCCCCAAGGTGTTTAGCAA ATTGAAAAACAGACCGCCCT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.014917 154223 154472 1371-1402 1.000000 90.2 ndhH-rps12_p3 ndhH-rps12 3 CCCAAGGTGTTTAGCAAGGT GCAAGAACGGACTAAGAGGG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.016164 154223 154472 1345-1376 1.000000 90.2 ndhH-rps12_p4 ndhH-rps12 4 TAAGCCAGCACTTTGAAGCA TTTGACCCTAAGCACCCAAC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.030439 146997 147116 2075-2075 0.600000 63.8 ndhH-rps12_p5 ndhH-rps12 5 TGCCCTTATGATTTCAGGCC TTTGACCCTAAGCACCCAAC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.082071 146997 147116 2726-2726 0.600000 63.3