Hotspot

trnT-UGU-trnL-UAA

LSC · 48400-49292 · 893 bp

Back to Calystegia

Pi 0.00373
MarkerSeek score 56.50
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 AAAGCCAGCTATCGGAATCG ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 988-991 bp 1.0 79.3
trnT-UGU-trnL-UAA_p2 AAAGCCAGCTATCGGAATCG TAGCGTCTACCAATTTCGCC 50.0 50.0 58.1 58.1 996-999 bp 1.0 78.8
trnT-UGU-trnL-UAA_p3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 975-978 bp 1.0 78.4
trnT-UGU-trnL-UAA_p4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 50.0 50.0 57.8 58.1 983-986 bp 1.0 77.9
trnT-UGU-trnL-UAA_p5 AAATGCGATGCTCTAACCCC ACCAATTTCGCCATATCCCC 50.0 50.0 58.3 58.0 947-950 bp 1.0 77.8