Hotspot

rps12

IRa · 141162-141959 · 798 bp

Back to Calochortus

Pi 0.0226
MarkerSeek score 71.70
Primer available yes
Label rps12

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
rps12_p1 TGACATGAGCGTGAAAGAGG ATTGAACGAGGAGCCGTATG 50.0 50.0 57.9 57.8 947-948 bp 1.0 79.0
rps12_p2 ACATGAGCGTGAAAGAGGTC ATTGAACGAGGAGCCGTATG 50.0 50.0 57.9 57.8 945-946 bp 1.0 79.0
rps12_p3 GACATGAGCGTGAAAGAGGT ATTGAACGAGGAGCCGTATG 50.0 50.0 57.9 57.8 946-947 bp 1.0 79.0
rps12_p4 CAGTACCTCGACGTGACATG ATTGAACGAGGAGCCGTATG 55.0 50.0 58.1 57.8 960-961 bp 1.0 78.9
rps12_p5 GCGTGAAAGAGGTCCAAGAA ATTGAACGAGGAGCCGTATG 50.0 50.0 58.1 57.8 939-940 bp 1.0 78.8
rps12_p1 ATTGAACGAGGAGCCGTATG TGACATGAGCGTGAAAGAGG 50.0 50.0 57.8 57.9 947-948 bp 1.0 79.0
rps12_p2 ATTGAACGAGGAGCCGTATG ACATGAGCGTGAAAGAGGTC 50.0 50.0 57.8 57.9 945-946 bp 1.0 79.0
rps12_p3 ATTGAACGAGGAGCCGTATG GACATGAGCGTGAAAGAGGT 50.0 50.0 57.8 57.9 946-947 bp 1.0 79.0
rps12_p4 ATTGAACGAGGAGCCGTATG CAGTACCTCGACGTGACATG 50.0 55.0 57.8 58.1 960-961 bp 1.0 78.9
rps12_p5 ATTGAACGAGGAGCCGTATG GCGTGAAAGAGGTCCAAGAA 50.0 50.0 57.8 58.1 939-940 bp 1.0 78.8