primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps12-rpl20_p1 rps12-rpl20 1 CAGCGTCGAGGAACATGTAC TCTCCGAGCGATATATCCCC 20 20 55.0 55.0 58.7 57.9 9.8 7.1 0.785066 14312 15044 799-799 1.000000 74.1 rps12-rpl20_p2 rps12-rpl20 2 AGCGTCGAGGAACATGTACT TCTCCGAGCGATATATCCCC 20 20 50.0 55.0 58.8 57.9 9.8 7.1 0.879449 14312 15044 798-798 1.000000 73.4 rps12-rpl20_p3 rps12-rpl20 3 TCAGCGTCGAGGAACATGTA TCTCCGAGCGATATATCCCC 20 20 50.0 55.0 58.8 57.9 9.8 7.1 0.883790 14312 15044 800-800 1.000000 73.3 rps12-rpl20_p4 rps12-rpl20 4 GCGTCGAGGAACATGTACTA TCTCCGAGCGATATATCCCC 20 20 50.0 55.0 57.2 57.9 9.8 7.1 0.892618 14312 15044 797-797 1.000000 73.3 rps12-rpl20_p5 rps12-rpl20 5 CAGCGTCGAGGAACATGTAC TTCTACGTCTCCGAGCGATA 20 20 55.0 50.0 58.7 57.8 9.8 15.9 0.960509 14312 15044 806-806 1.000000 72.7 petG-petL_p1 petG-petL 1 TCAAAGGTCCAACTGATCGC TAGCTCCTTGATGCCTACCA 20 20 50.0 50.0 58.2 57.8 0.0 0.0 0.366275 17768 17932 385-385 1.000000 77.7 petG-petL_p2 petG-petL 2 TCAAAGGTCCAACTGATCGC AGCTCCTTGATGCCTACCAT 20 20 50.0 50.0 58.2 58.5 0.0 0.0 0.675480 17768 17932 384-384 1.000000 75.2 petG-petL_p3 petG-petL 3 CGCCACGCCTGTATTGTAAA TAGCTCCTTGATGCCTACCA 20 20 50.0 50.0 58.9 57.8 0.0 0.0 1.094387 17768 17932 368-368 1.000000 71.9 petG-petL_p4 petG-petL 4 TCAAAGGTCCAACTGATCGC TGGTCTGAGCAAGATACGAC 20 20 50.0 50.0 58.2 57.1 0.0 7.1 1.133042 17768 17932 307-307 1.000000 71.7 petG-petL_p5 petG-petL 5 TCAAAGGTCCAACTGATCGC AGCTCCTTGATGCCTACCA 20 19 50.0 52.6 58.2 58.0 0.0 0.0 1.203742 17768 17932 384-384 1.000000 71.0 psbJ-petA_p1 psbJ-petA 1 TGTGATCGGTTTAGTAGGCG ACGTGTACAAGGCCTTTTGT 20 20 50.0 45.0 57.4 58.0 0.0 17.6 0.619192 20068 20851 953-960 1.000000 76.0 psbJ-petA_p2 psbJ-petA 2 GTGATCGGTTTAGTAGGCGT ACGTGTACAAGGCCTTTTGT 20 20 50.0 45.0 57.4 58.0 0.0 17.6 0.620943 20068 20851 952-959 1.000000 76.0 psbJ-petA_p3 psbJ-petA 3 TGTGATCGGTTTAGTAGGCG GGCCTTTTGTTCTTCTTCGC 20 20 50.0 50.0 57.4 57.9 0.0 0.0 0.624069 20068 20851 943-950 1.000000 75.9 psbJ-petA_p4 psbJ-petA 4 GTGATCGGTTTAGTAGGCGT GGCCTTTTGTTCTTCTTCGC 20 20 50.0 50.0 57.4 57.9 0.0 0.0 0.625820 20068 20851 942-949 1.000000 75.9 psbJ-petA_p5 psbJ-petA 5 TATTCCGGATTGGGTTCGTC ACGTGTACAAGGCCTTTTGT 20 20 50.0 45.0 57.4 58.0 4.1 17.6 0.654633 20068 20851 916-923 1.000000 75.7 rbcL-atpB_p1 rbcL-atpB 1 CACCAGCTTTGAATCCAACAC CTACATCTAGTACCGGCCCA 21 20 47.6 55.0 58.0 58.0 0.0 0.0 1.026144 28749 29483 877-878 1.000000 72.2 rbcL-atpB_p2 rbcL-atpB 2 ACCAGCTTTGAATCCAACACT CTACATCTAGTACCGGCCCA 21 20 42.9 55.0 58.1 58.0 0.0 0.0 1.059432 28749 29483 876-877 1.000000 71.9 rbcL-atpB_p3 rbcL-atpB 3 CACCAGCTTTGAATCCAACAC ATCTAGTACCGGCCCAATGA 21 20 47.6 50.0 58.0 57.9 0.0 0.0 1.114375 28749 29483 873-874 1.000000 71.5 rbcL-atpB_p4 rbcL-atpB 4 CACCAGCTTTGAATCCAACAC TCTAGTACCGGCCCAATGAT 21 20 47.6 50.0 58.0 57.9 0.0 0.0 1.114375 28749 29483 872-873 1.000000 71.5 rbcL-atpB_p5 rbcL-atpB 5 CACCAGCTTTGAATCCAACAC GATACGCCCCAGGTTCTTTT 21 20 47.6 50.0 58.0 57.9 0.0 0.0 1.141542 28749 29483 846-847 1.000000 71.2 trnV-UAC-ndhC_p1 trnV-UAC-ndhC 1 AGAAGGTCTACGGTTCGAGT GTCCTTTGCTAATCGGAGCT 20 20 50.0 50.0 57.8 57.7 0.0 0.0 0.514813 32476 33464 1134-1154 1.000000 76.6 trnV-UAC-ndhC_p2 trnV-UAC-ndhC 2 AGAAGGTCTACGGTTCGAGT CGGTCCTTTGCTAATCGGAG 20 20 50.0 55.0 57.8 58.4 0.0 0.0 0.625364 32476 33464 1136-1156 1.000000 75.7 trnV-UAC-ndhC_p3 trnV-UAC-ndhC 3 AGAAGGTCTACGGTTCGAGT CTCCGGTCCTTTGCTAATCG 20 20 50.0 55.0 57.8 58.4 0.0 0.0 0.625364 32476 33464 1139-1159 1.000000 75.7 trnV-UAC-ndhC_p4 trnV-UAC-ndhC 4 GAAGGTCTACGGTTCGAGTC GTCCTTTGCTAATCGGAGCT 20 20 55.0 50.0 57.5 57.7 0.0 0.0 0.858585 32476 33464 1133-1153 1.000000 73.8 trnV-UAC-ndhC_p5 trnV-UAC-ndhC 5 AGAAGGTCTACGGTTCGAGT GGTCCTTTGCTAATCGGAGC 20 20 50.0 55.0 57.8 58.7 0.0 3.4 0.896802 32476 33464 1135-1155 1.000000 73.5 ndhJ-trnF-GAA_p1 ndhJ-trnF-GAA 1 AGTTGGATAGGATGGCCCTT GTGCAGAGACTCGATGGAAG 20 20 50.0 55.0 58.1 58.1 0.0 0.0 0.167220 35141 35814 1306-1452 1.000000 82.9 ndhJ-trnF-GAA_p2 ndhJ-trnF-GAA 2 ACAAGTTTCAGGTTGGGCAT GTGCAGAGACTCGATGGAAG 20 20 45.0 55.0 57.9 58.1 0.0 0.0 0.166692 35141 35814 1961-2107 1.000000 82.8 ndhJ-trnF-GAA_p3 ndhJ-trnF-GAA 3 GAAAAAGTCGCGGCTCAATC GTGCAGAGACTCGATGGAAG 20 20 50.0 55.0 58.1 58.1 16.4 0.0 0.196606 35141 35814 1792-1938 1.000000 82.6 ndhJ-trnF-GAA_p4 ndhJ-trnF-GAA 4 TGGCATTCCATTGCTGTCAT GTGCAGAGACTCGATGGAAG 20 20 45.0 55.0 58.1 58.1 0.0 0.0 0.224787 35141 35814 1606-1752 1.000000 82.4 ndhJ-trnF-GAA_p5 ndhJ-trnF-GAA 5 ACAAGTTTCAGGTTGGGCAT AGAGACTCGATGGAAGCTGT 20 20 45.0 50.0 57.9 58.2 0.0 0.0 0.240604 35141 35814 1957-2103 1.000000 82.2 trnL-UAA-trnT-UGU_p1 trnL-UAA-trnT-UGU 1 ACCAATTTCGCCATATCCCC GCGATGCTCTAACCTCTGAG 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.137364 36696 37225 576-580 1.000000 80.0 trnL-UAA-trnT-UGU_p2 trnL-UAA-trnT-UGU 2 TAGCGTCTACCAATTTCGCC GCGATGCTCTAACCTCTGAG 20 20 50.0 55.0 58.1 57.9 0.0 0.0 0.202173 36696 37225 584-588 1.000000 79.5 trnL-UAA-trnT-UGU_p3 trnL-UAA-trnT-UGU 3 ACCAATTTCGCCATATCCCC GGAATCGAACCGATGACCAT 20 20 50.0 50.0 58.0 57.8 0.0 15.5 0.245117 36696 37225 608-612 1.000000 79.1 trnL-UAA-trnT-UGU_p4 trnL-UAA-trnT-UGU 4 TAGCGTCTACCAATTTCGCC GGAATCGAACCGATGACCAT 20 20 50.0 50.0 58.1 57.8 0.0 15.5 0.309926 36696 37225 616-620 1.000000 78.6 trnL-UAA-trnT-UGU_p5 trnL-UAA-trnT-UGU 5 AGTCCGTAGCGTCTACCAAT GCGATGCTCTAACCTCTGAG 20 20 50.0 55.0 58.2 57.9 10.2 0.0 0.372548 36696 37225 590-594 1.000000 78.1 trnT-GGU-trnG-UCC_p1 trnT-GGU-trnG-UCC 1 GATTGGAACCGAGGGCTTAC ATCAAACCGAAAGACCCCTT 20 20 55.0 45.0 58.3 57.0 0.0 0.0 1.307027 52486 52656 307-312 1.000000 71.4 trnT-GGU-trnG-UCC_p2 trnT-GGU-trnG-UCC 2 GATTGGAACCGAGGGCTTAC AATCAAACCGAAAGACCCCT 20 20 55.0 45.0 58.3 57.0 0.0 0.0 1.307027 52486 52656 308-313 1.000000 71.3 trnT-GGU-trnG-UCC_p3 trnT-GGU-trnG-UCC 3 GCCGCTTATTGGATTGGAAC AATCAAACCGAAAGACCCCT 20 20 50.0 45.0 57.5 57.0 0.0 0.0 1.463920 52486 52656 319-324 1.000000 70.0 trnT-GGU-trnG-UCC_p4 trnT-GGU-trnG-UCC 4 GCCGCTTATTGGATTGGAAC ATCAAACCGAAAGACCCCTT 20 20 50.0 45.0 57.5 57.0 0.0 0.0 1.463920 52486 52656 318-323 1.000000 70.0 trnT-GGU-trnG-UCC_p5 trnT-GGU-trnG-UCC 5 GATTGGAACCGAGGGCTTAC GAATCAAACCGAAAGACCCCT 20 21 55.0 47.6 58.3 58.2 0.0 0.0 1.543472 52486 52656 309-314 1.000000 69.4 atpH-atpI_p1 atpH-atpI 1 ATAACGGAAGCGGCAGAAAT TTTTGCAACATTAGCCGCAG 20 20 45.0 45.0 58.0 57.9 1.4 0.0 0.101543 57386 58413 1115-1115 1.000000 79.5 atpH-atpI_p2 atpH-atpI 2 CAGTACCTTGACCAACTCCG TTTTGCAACATTAGCCGCAG 20 20 55.0 45.0 57.9 57.9 0.0 0.0 0.143442 57386 58413 1174-1174 1.000000 79.2 atpH-atpI_p3 atpH-atpI 3 AGCCAATCCAGCAGCAATAA TTTTGCAACATTAGCCGCAG 20 20 45.0 45.0 57.9 57.9 0.0 0.0 0.211601 57386 58413 1131-1131 1.000000 78.7 atpH-atpI_p4 atpH-atpI 4 AATAACGGAAGCGGCAGAAA TTTTGCAACATTAGCCGCAG 20 20 45.0 45.0 58.2 57.9 1.4 0.0 0.247081 57386 58413 1116-1116 1.000000 78.4 atpH-atpI_p5 atpH-atpI 5 GCAGTACCTTGACCAACTCC TTTTGCAACATTAGCCGCAG 20 20 55.0 45.0 58.2 57.9 0.0 0.0 0.253472 57386 58413 1175-1175 1.000000 78.3 rpoB-trnE-UUC_p1 rpoB-trnE-UUC 1 AGTTCCTCTGTCAAACCTTGA GGGACTTGAACCCTCGTTTT 21 20 42.9 50.0 56.8 58.0 0.0 0.0 2.237066 70574 71500 1069-1069 1.000000 62.8 rpoB-trnE-UUC_p2 rpoB-trnE-UUC 2 AGTTCCTCTGTCAAACCTTGA GAGTTTTGGTACACCCCCAG 21 20 42.9 55.0 56.8 58.1 0.0 0.0 2.308485 70574 71500 1090-1090 1.000000 62.2 rpoB-trnE-UUC_p3 rpoB-trnE-UUC 3 AGTTCCTCTGTCAAACCTTGA GTTTTGGTACACCCCCAGAG 21 20 42.9 55.0 56.8 58.1 0.0 0.0 2.308485 70574 71500 1088-1088 1.000000 62.2 rpoB-trnE-UUC_p4 rpoB-trnE-UUC 4 AGTTCCTCTGTCAAACCTTGA TAACCACTGGACCATAGGGG 21 20 42.9 55.0 56.8 58.1 0.0 14.8 2.326325 70574 71500 1028-1028 1.000000 62.1 rpoB-trnE-UUC_p5 rpoB-trnE-UUC 5 AGTTCCTCTGTCAAACCTTGA CCCTCGTTTTCTCCGTGAAA 21 20 42.9 50.0 56.8 58.1 0.0 0.0 2.340425 70574 71500 1059-1059 1.000000 62.0 trnD-GUC-psbM_p1 trnD-GUC-psbM 1 TTCAATAGGCAAGAGCACCG AGTAGAAAGGCAGTAGGAACT 20 21 50.0 42.9 58.3 55.7 0.0 0.0 3.550437 72004 72633 762-762 1.000000 52.0 trnD-GUC-psbM_p2 trnD-GUC-psbM 2 TTCAATAGGCAAGAGCACCG GGAACTAAAATGAACAGTGCAGT 20 23 50.0 39.1 58.3 57.6 0.0 0.0 3.700923 72004 72633 747-747 1.000000 50.8 trnD-GUC-psbM_p3 trnD-GUC-psbM 3 TTCAATAGGCAAGAGCACCG AAAATGAACAGTGCAGTAGC 20 20 50.0 40.0 58.3 54.5 0.0 0.0 3.756773 72004 72633 741-741 1.000000 50.4 trnD-GUC-psbM_p4 trnD-GUC-psbM 4 TTCAATAGGCAAGAGCACCG AAGTAGAAAGGCAGTAGGAACT 20 22 50.0 40.9 58.3 56.5 0.0 0.0 3.786412 72004 72633 763-763 1.000000 50.1 trnD-GUC-psbM_p5 trnD-GUC-psbM 5 TTCAATAGGCAAGAGCACCG ACTAAAATGAACAGTGCAGTAGC 20 23 50.0 39.1 58.3 57.4 0.0 0.0 3.875520 72004 72633 744-744 1.000000 49.4 trnQ-UUG-rps16_p1 trnQ-UUG-rps16 1 GAGGTTCGAATCCTTCCGTC AAGTCGCACGTTGCTTTCTA 20 20 55.0 45.0 58.1 58.1 16.9 8.1 0.215425 76211 77059 909-922 1.000000 80.1 trnQ-UUG-rps16_p2 trnQ-UUG-rps16 2 GAGGTTCGAATCCTTCCGTC TCATGTCCTTCAAGTCGCAC 20 20 55.0 50.0 58.1 58.2 16.9 0.0 0.280333 76211 77059 920-933 1.000000 79.6 trnQ-UUG-rps16_p3 trnQ-UUG-rps16 3 GAGGTTCGAATCCTTCCGTC CACACCGGATCATGTCCTTC 20 20 55.0 55.0 58.1 58.3 16.9 9.5 0.419449 76211 77059 929-942 1.000000 78.4 trnQ-UUG-rps16_p4 trnQ-UUG-rps16 4 GAGGTTCGAATCCTTCCGTC CACCGGATCATGTCCTTCAA 20 20 55.0 50.0 58.1 57.6 16.9 9.5 0.477684 76211 77059 927-940 1.000000 78.0 trnQ-UUG-rps16_p5 trnQ-UUG-rps16 5 GAGGTTCGAATCCTTCCGTC CCGGATCATGTCCTTCAAGT 20 20 55.0 50.0 58.1 57.3 16.9 0.0 0.774956 76211 77059 925-938 1.000000 75.6 psbA-trnH-GUG_p1 psbA-trnH-GUG 1 CCGTGCTAACCTTGGTATGG GATCCACTTGGCTACATCCG 20 20 55.0 55.0 58.3 58.1 0.0 0.0 0.465225 82739 83143 515-524 1.000000 78.1 psbA-trnH-GUG_p2 psbA-trnH-GUG 2 CCGTGCTAACCTTGGTATGG CAATCCACTGCCTTGATCCA 20 20 55.0 50.0 58.3 57.9 0.0 0.0 0.469587 82739 83143 529-538 1.000000 78.0 psbA-trnH-GUG_p3 psbA-trnH-GUG 3 CCGTGCTAACCTTGGTATGG AATCCACTGCCTTGATCCAC 20 20 55.0 50.0 58.3 57.9 0.0 0.0 0.471094 82739 83143 528-537 1.000000 78.0 psbA-trnH-GUG_p4 psbA-trnH-GUG 4 CCGTGCTAACCTTGGTATGG ACAATCCACTGCCTTGATCC 20 20 55.0 50.0 58.3 57.9 0.0 0.0 0.471094 82739 83143 530-539 1.000000 78.0 psbA-trnH-GUG_p5 psbA-trnH-GUG 5 ACCGTGCTAACCTTGGTATG GATCCACTTGGCTACATCCG 20 20 50.0 55.0 57.6 58.1 0.0 0.0 0.525510 82739 83143 516-525 1.000000 77.6 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 TATAGGGCGGCCTTAAAAGC AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 57.7 58.0 37.4 0.0 0.273419 111242 111926 807-807 1.000000 78.2 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 TATAGGGCGGCCTTAAAAGC CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 57.7 58.0 37.4 0.0 0.274790 111242 111926 808-808 1.000000 78.2 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GCGGCCTTAAAAGCTTTGTC AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 58.3 58.0 13.5 0.0 0.309665 111242 111926 801-801 1.000000 77.9 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GCGGCCTTAAAAGCTTTGTC CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 58.3 58.0 13.5 0.0 0.311036 111242 111926 802-802 1.000000 77.9 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AGGATATAGGGCGGCCTTAA AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 57.7 58.0 37.4 0.0 0.345189 111242 111926 811-811 1.000000 77.6 ndhD_p1 ndhD 1 GCCGCTCGACTCTTCAAAAT GGAAATAGGGTAATCCGGTGG 20 21 50.0 52.4 58.9 57.9 0.0 0.0 2.056506 113363 114745 1468-1468 1.000000 63.7 ndhD_p2 ndhD 2 CCGCTCGACTCTTCAAAATC GGAAATAGGGTAATCCGGTGG 20 21 50.0 52.4 56.9 57.9 0.0 0.0 2.211190 113363 114745 1467-1467 1.000000 62.5 ndhD_p3 ndhD 3 GCCGCTCGACTCTTCAAAAT AGGGTAATCCGGTGGTATACT 20 21 50.0 47.6 58.9 57.4 0.0 0.0 2.545749 113363 114745 1462-1462 1.000000 59.8 ndhD_p4 ndhD 4 TTTTTCATTCGCCGCTCGA GGAAATAGGGTAATCCGGTGG 19 21 47.4 52.4 58.5 57.9 0.0 0.0 2.601557 113363 114745 1478-1478 1.000000 59.3 ndhD_p5 ndhD 5 GCCGCTCGACTCTTCAAAA GGAAATAGGGTAATCCGGTGG 19 21 52.6 52.4 58.5 57.9 0.0 0.0 2.607212 113363 114745 1468-1468 1.000000 59.3 rps15-trnN-GUU_p1 rps15-trnN-GUU 1 TCTTGTTCTCCTTGCAAAAGA GAATCTACCCGTCTCTCTGT 21 20 38.1 50.0 55.6 55.8 0.0 0.0 5.570444 121734 121883 307-307 1.000000 41.0 rps15-trnN-GUU_p2 rps15-trnN-GUU 2 TCTTGTTCTCCTTGCAAAAGAA GAATCTACCCGTCTCTCTGT 22 20 36.4 50.0 56.4 55.8 16.2 0.0 5.813882 121734 121883 307-307 1.000000 41.0 rps15-trnN-GUU_p3 rps15-trnN-GUU 3 ATCTTGTTCTCCTTGCAAAAGA GAATCTACCCGTCTCTCTGT 22 20 36.4 50.0 56.2 55.8 9.3 0.0 6.026185 121734 121883 308-308 1.000000 41.0 rps15-trnN-GUU_p4 rps15-trnN-GUU 4 CTTGTTCTCCTTGCAAAAGA GAATCTACCCGTCTCTCTGT 20 20 40.0 50.0 54.0 55.8 0.0 0.0 6.180942 121734 121883 306-306 1.000000 41.0 rps15-trnN-GUU_p5 rps15-trnN-GUU 5 TCTTGTTCTCCTTGCAAAAG GAATCTACCCGTCTCTCTGT 20 20 40.0 50.0 54.0 55.8 0.0 0.0 6.180942 121734 121883 307-307 1.000000 41.0 ycf15-rps12_p1 ycf15-rps12 1 GAAAGGACTCACTAAGCCGG TGGCAACTTTACGTAAGGCA 20 20 55.0 45.0 58.0 57.7 0.0 16.5 0.269231 136014 136958 1020-1040 1.000000 78.1 ycf15-rps12_p2 ycf15-rps12 2 CGGTACAATCCTCTTCCTGC TGGCAACTTTACGTAAGGCA 20 20 55.0 45.0 58.1 57.7 0.0 16.5 0.316366 136014 136958 1107-1127 1.000000 77.7 ycf15-rps12_p3 ycf15-rps12 3 GTACAATCCTCTTCCTGCCG TGGCAACTTTACGTAAGGCA 20 20 55.0 45.0 58.1 57.7 0.0 16.5 0.316366 136014 136958 1105-1125 1.000000 77.7 ycf15-rps12_p4 ycf15-rps12 4 TACAATCCTCTTCCTGCCGA TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 58.1 57.7 0.0 16.5 0.397050 136014 136958 1104-1124 1.000000 77.0 ycf15-rps12_p5 ycf15-rps12 5 GGTACAATCCTCTTCCTGCC TGGCAACTTTACGTAAGGCA 20 20 55.0 45.0 57.7 57.7 0.0 16.5 0.591379 136014 136958 1106-1126 1.000000 75.5