Hotspot

trnT-UGU-trnL-UAA

LSC · 46458-47570 · 1113 bp

Back to Calamus

Pi 0.0131
MarkerSeek score 72.00
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 AAAGCCAGCTATCGGAATCG ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 1109-1208 bp 1.0 85.0
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 1064-1163 bp 1.0 85.0
trnT-UGU-trnL-UAA_p3 AAAGCCAGCTATCGGAATCG TAGCGTCTACCAATTTCGCC 50.0 50.0 58.1 58.1 1117-1216 bp 1.0 84.5
trnT-UGU-trnL-UAA_p4 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 1072-1171 bp 1.0 84.5
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 1096-1195 bp 1.0 84.1