primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AAAGCCGAGTACTCTACCGT GGAACTTCCGTCTAATCAAACG 20 22 50.0 45.5 58.2 57.4 20.3 0.0 2.747690 4205 5094 944-974 1.000000 69.0 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAGCCGAGTACTCTACCGTT GGAACTTCCGTCTAATCAAACG 20 22 50.0 45.5 58.2 57.4 20.3 0.0 2.747690 4205 5094 943-973 1.000000 69.0 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 TCTAGCCGCACTTAAAAGCC GGAACTTCCGTCTAATCAAACG 20 22 50.0 45.5 58.3 57.4 0.0 0.0 2.845107 4205 5094 958-988 1.000000 68.2 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 TCAGTCGTGGTCTTCCAAAC GGAACTTCCGTCTAATCAAACG 20 22 50.0 45.5 57.8 57.4 0.0 0.0 2.813570 4205 5094 1029-1059 1.000000 67.8 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 CAGTCGTGGTCTTCCAAACT GGAACTTCCGTCTAATCAAACG 20 22 50.0 45.5 57.8 57.4 0.0 0.0 2.819763 4205 5094 1028-1058 1.000000 67.7 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6211 7326 1161-1222 1.000000 89.4 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AAGTCGCACGTTGCTTTCTA GAAATTGAAATGGGGCGTGG 20 20 45.0 50.0 58.1 58.0 8.1 0.0 0.148076 6211 7326 1219-1280 0.964286 88.0 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 GGATCGTGTCCTTCAAGTCG GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.4 58.1 2.9 16.9 0.445953 6211 7326 1175-1236 1.000000 87.5 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 GGATCGTGTCCTTCAAGTCG GAAATTGAAATGGGGCGTGG 20 20 55.0 50.0 58.4 58.0 2.9 0.0 0.378604 6211 7326 1233-1294 0.964286 86.0 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 CGTTGCTTTCTACCACATCG GAAATTGAAATGGGGCGTGG 20 20 50.0 50.0 57.2 58.0 0.0 0.0 0.796474 6211 7326 1211-1272 0.964286 82.8 trnC-GCA-petN_p1 trnC-GCA-petN 1 TTTCCCCAGTTCAAATCCGG ACTTCTTCCCCACACTACGA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.087498 28389 29229 913-956 1.000000 88.5 trnC-GCA-petN_p2 trnC-GCA-petN 2 TTTCCCCAGTTCAAATCCGG TTCTTCCCCACACTACGAGT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.087498 28389 29229 911-954 1.000000 88.5 trnC-GCA-petN_p3 trnC-GCA-petN 3 TTTCCCCAGTTCAAATCCGG CACTTCTTCCCCACACTACG 20 20 50.0 55.0 58.1 57.9 0.0 0.0 0.162414 28389 29229 914-957 1.000000 87.9 trnC-GCA-petN_p4 trnC-GCA-petN 4 TTGTATCAGTTTGGCGGCAT ACTTCTTCCCCACACTACGA 20 20 45.0 50.0 58.2 58.0 14.3 0.0 0.172487 28389 29229 967-1010 1.000000 87.7 trnC-GCA-petN_p5 trnC-GCA-petN 5 TTGTATCAGTTTGGCGGCAT TTCTTCCCCACACTACGAGT 20 20 45.0 50.0 58.2 58.0 14.3 0.0 0.172487 28389 29229 965-1008 1.000000 87.7 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG ACAAAAACGAAACGGTCCCT 20 20 55.0 45.0 58.1 58.2 7.6 0.0 0.310137 32087 33433 1461-1521 1.000000 84.0 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 TCAGTGGTAGAGTAACGCCA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.332292 32087 33433 1464-1524 1.000000 83.8 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GTGGTAGAGTAACGCCATGG GGACCAGCCTACAAAAACGA 20 20 55.0 50.0 58.1 58.1 7.6 0.0 0.177181 32087 33433 1496-1531 0.964286 81.5 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 TCAGTGGTAGAGTAACGCCA GGACCAGCCTACAAAAACGA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.199336 32087 33433 1499-1534 0.964286 81.3 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 GGCGTAAGTCATCGGTTCAA GGACCAGCCTACAAAAACGA 20 20 50.0 50.0 58.3 58.1 0.0 0.0 0.395920 32087 33433 1473-1508 0.964286 79.8 psbZ-trnG-GCC_p1 psbZ-trnG-GCC 1 TTGCTTCTCCTGATGGTTGG AATCGAACCCGCATCTTCTC 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.263697 36715 37018 447-479 1.000000 87.6 psbZ-trnG-GCC_p2 psbZ-trnG-GCC 2 TTGCTTCTCCTGATGGTTGG GAATCGAACCCGCATCTTCT 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.263697 36715 37018 448-480 1.000000 87.5 psbZ-trnG-GCC_p3 psbZ-trnG-GCC 3 GCTTCTCCTGATGGTTGGTC AATCGAACCCGCATCTTCTC 20 20 55.0 50.0 58.3 58.1 0.0 0.0 0.314679 36715 37018 445-477 1.000000 87.2 psbZ-trnG-GCC_p4 psbZ-trnG-GCC 4 GCTTCTCCTGATGGTTGGTC GAATCGAACCCGCATCTTCT 20 20 55.0 50.0 58.3 58.1 0.0 0.0 0.314679 36715 37018 446-478 1.000000 87.2 psbZ-trnG-GCC_p5 psbZ-trnG-GCC 5 CCGTCGTATTTGCTTCTCCT AATCGAACCCGCATCTTCTC 20 20 50.0 50.0 57.7 58.1 0.0 0.0 0.353928 36715 37018 456-488 1.000000 86.7 ycf3-trnS-GGA_p1 ycf3-trnS-GGA 1 TGCCTCCTTTTCTCCTGAAG CCCTCGGTAAACAAAAGCCT 20 20 50.0 50.0 57.1 58.1 0.0 0.0 0.961472 45088 45918 993-1026 1.000000 76.8 ycf3-trnS-GGA_p2 ycf3-trnS-GGA 2 GCCTCCTTTTCTCCTGAAGT CCCTCGGTAAACAAAAGCCT 20 20 50.0 50.0 57.1 58.1 0.0 0.0 0.963464 45088 45918 992-1025 1.000000 76.8 ycf3-trnS-GGA_p3 ycf3-trnS-GGA 3 TGCCTCCTTTTCTCCTGAAG ACGGAAAGAGAGGGATTCGA 20 20 50.0 50.0 57.1 58.2 0.0 0.0 1.018457 45088 45918 1014-1047 1.000000 76.2 ycf3-trnS-GGA_p4 ycf3-trnS-GGA 4 GCCTCCTTTTCTCCTGAAGT ACGGAAAGAGAGGGATTCGA 20 20 50.0 50.0 57.1 58.2 0.0 0.0 1.020450 45088 45918 1013-1046 1.000000 76.2 ycf3-trnS-GGA_p5 ycf3-trnS-GGA 5 TGCCTCCTTTTCTCCTGAAG TTCCAATGCTACGCCTTGAA 20 20 50.0 45.0 57.1 57.8 0.0 5.6 1.059773 45088 45918 964-997 1.000000 76.1 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG CCGTAGCGTCTACCGATTTC 20 20 55.0 55.0 57.9 58.2 0.0 10.2 0.381189 47324 48025 758-803 1.000000 84.8 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGAATCGAACCGATGACCAT CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.8 58.2 15.5 10.2 0.488942 47324 48025 790-835 1.000000 83.6 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG CGTCTACCGATTTCGCCATA 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.543526 47324 48025 752-797 1.000000 83.5 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GCGATGCTCTAACCTCTGAG GGTTTCCATACCAAGGCTCA 20 20 55.0 50.0 57.9 57.5 0.0 0.0 0.640147 47324 48025 790-835 1.000000 82.4 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGAATCGAACCGATGACCAT CGTCTACCGATTTCGCCATA 20 20 50.0 50.0 57.8 57.6 15.5 0.0 0.651279 47324 48025 784-829 1.000000 82.4 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 GGGGCTAAAATCCCGGAAAT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.9 57.8 0.7 0.0 0.279423 51360 52510 1272-1288 0.964286 83.2 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 GGGGCTAAAATCCCGGAAAT GTTCGAGTCCGTATAGCCCT 20 20 50.0 55.0 57.9 58.7 0.7 0.0 0.765489 51360 52510 1260-1281 1.000000 81.2 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TTCTCCGGCCCTTTCCTAAT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.4 57.8 0.0 0.0 0.605515 51360 52510 1293-1309 0.964286 80.4 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 GGGGCTAAAATCCCGGAAAT GAAGGTCTACGGTTCGAGTC 20 20 50.0 55.0 57.9 57.5 0.7 0.0 0.623195 51360 52510 1271-1287 0.964286 80.4 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 CCCTTTCCTAATCGGGGCTA AGAAGGTCTACGGTTCGAGT 20 20 55.0 50.0 58.6 57.8 0.0 0.0 0.766291 51360 52510 1285-1301 0.964286 79.2 ycf4-cemA_p1 ycf4-cemA 1 ATTCCCTTGACCCGTACTGA GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.129660 61707 62580 916-1056 1.000000 86.4 ycf4-cemA_p2 ycf4-cemA 2 TTCCCTTGACCCGTACTGAT GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.129660 61707 62580 915-1055 1.000000 86.4 ycf4-cemA_p3 ycf4-cemA 3 TATTTCTTGCGCGTACCGAT GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 57.8 58.1 8.4 0.0 0.289513 61707 62580 847-987 1.000000 85.2 ycf4-cemA_p4 ycf4-cemA 4 GAACAAAAAGCCGCGGAATT GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 58.2 58.1 33.5 0.0 0.298310 61707 62580 871-1011 1.000000 85.2 ycf4-cemA_p5 ycf4-cemA 5 GCTATTCCCTTGACCCGTAC GAGAAATCCACCAGGGCAAA 20 20 55.0 50.0 57.8 58.1 0.0 0.0 0.312489 61707 62580 919-1059 1.000000 84.9 petA-psbJ_p1 petA-psbJ 1 GAGAAGGTTCAATTGGCCGA GCTGGTATTCTTGTGATCGGT 20 21 50.0 47.6 58.2 58.1 5.4 0.0 1.272430 64442 65375 1040-1136 1.000000 77.8 petA-psbJ_p2 petA-psbJ 2 TCGAGAAGGTTCAATTGGCC GCTGGTATTCTTGTGATCGGT 20 21 50.0 47.6 58.2 58.1 5.4 0.0 1.272430 64442 65375 1042-1138 1.000000 77.8 petA-psbJ_p3 petA-psbJ 3 GAGAAGGTTCAATTGGCCGA AGCTGGTATTCTTGTGATCGG 20 21 50.0 47.6 58.2 57.8 5.4 0.0 1.364030 64442 65375 1041-1137 1.000000 77.0 petA-psbJ_p4 petA-psbJ 4 TCGAGAAGGTTCAATTGGCC AGCTGGTATTCTTGTGATCGG 20 21 50.0 47.6 58.2 57.8 5.4 0.0 1.364030 64442 65375 1043-1139 1.000000 77.0 petA-psbJ_p5 petA-psbJ 5 GATCCATTACGGGTCCAAGG GCTGGTATTCTTGTGATCGGT 20 21 55.0 47.6 57.7 58.1 0.0 0.0 1.349763 64442 65375 1127-1223 1.000000 76.7 ndhF_p1 ndhF 1 AGGGTGGAAAGTGAGGAAGA GCCCAATACCCCTTCCTTTT 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.366102 110611 112866 2939-2975 0.500000 59.4 ndhF_p2 ndhF 2 CGGAAGAAAGGGTGGAAAGT GCCCAATACCCCTTCCTTTT 20 20 50.0 50.0 57.7 57.8 0.0 0.0 0.519643 110611 112866 2947-2983 0.500000 58.2 ndhF_p3 ndhF 3 AGGGTGGAAAGTGAGGAAGA TCCCCAAGGAAAACGCTTTT 20 20 50.0 45.0 57.9 58.2 0.0 0.0 0.335332 110611 112866 2965-2995 0.464286 58.1 ndhF_p4 ndhF 4 ACGGAAGAAAGGGTGGAAAG TCCCCAAGGAAAACGCTTTT 20 20 50.0 45.0 57.7 58.2 0.0 0.0 0.488873 110611 112866 2974-2987 0.428571 55.4 ndhF_p5 ndhF 5 CGGAAGAAAGGGTGGAAAGT TCCCCAAGGAAAACGCTTTT 20 20 50.0 45.0 57.7 58.2 0.0 0.0 0.488873 110611 112866 2973-2986 0.428571 55.4 ndhF-rpl32_p1 ndhF-rpl32 1 GGAAAGGTATGATCCACGCA TGATGCAGAAGTACGTTTTT 20 20 50.0 35.0 57.7 53.5 0.0 0.0 4.861698 112867 113372 569-594 1.000000 51.9 ndhF-rpl32_p2 ndhF-rpl32 2 GGAAAGGTATGATCCACGCA TTGATGCAGAAGTACGTTTT 20 20 50.0 35.0 57.7 53.5 0.0 0.0 4.861698 112867 113372 570-595 1.000000 51.9 ndhF-rpl32_p3 ndhF-rpl32 3 GGAAAGGTATGATCCACGCA TTTGATGCAGAAGTACGTTT 20 20 50.0 35.0 57.7 53.5 0.0 0.0 4.861698 112867 113372 571-596 1.000000 51.9 ndhF-rpl32_p4 ndhF-rpl32 4 GGAAAGGTATGATCCACGCA TTTTGATGCAGAAGTACGTT 20 20 50.0 35.0 57.7 53.5 0.0 0.0 4.861698 112867 113372 572-597 1.000000 51.9 ndhF-rpl32_p5 ndhF-rpl32 5 GGAAAGGTATGATCCACGCA TTTTTGATGCAGAAGTACGT 20 20 50.0 35.0 57.7 53.5 0.0 0.0 4.861698 112867 113372 573-598 1.000000 51.9 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GTGCAACAAACAAATAAAATAAGT TCCTAAGAGCAGCGTGTCTA 24 20 25.0 50.0 53.6 57.9 0.0 0.0 8.539213 113550 114447 951-998 0.964286 49.3 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GTGCAACAAACAAATAAAATAAGT AGCAGCGTGTCTACCAATTT 24 20 25.0 45.0 53.6 57.8 0.0 0.0 8.599940 113550 114447 944-991 0.964286 49.3 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GTGCAACAAACAAATAAAATAAGT CCTAAGAGCAGCGTGTCTAC 24 20 25.0 55.0 53.6 57.8 0.0 0.0 8.611231 113550 114447 950-997 0.964286 49.3 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GTGCAACAAACAAATAAAATAAGT CTAAGAGCAGCGTGTCTACC 24 20 25.0 55.0 53.6 57.8 0.0 0.0 8.611231 113550 114447 949-996 0.964286 49.3 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GTGCAACAAACAAATAAAATAAGT TTTAGGAGATGACATGCCGC 24 20 25.0 50.0 53.6 58.0 0.0 0.0 8.461377 113550 114447 1006-1053 0.964286 49.1 ccsA-ndhD_p1 ccsA-ndhD 1 TTCAGCAATTGTGGCGTCTA ACCCCGATTTCGTTCTTTCA 20 20 45.0 45.0 57.8 57.4 7.4 0.0 0.731764 115595 115834 409-430 1.000000 84.4 ccsA-ndhD_p2 ccsA-ndhD 2 GCAATTGTGGCGTCTATTGG ACCCCGATTTCGTTCTTTCA 20 20 50.0 45.0 57.8 57.4 7.4 0.0 0.747676 115595 115834 405-426 1.000000 84.3 ccsA-ndhD_p3 ccsA-ndhD 3 AATTCAGCAATTGTGGCGTC ACCCCGATTTCGTTCTTTCA 20 20 45.0 45.0 57.6 57.4 7.4 0.0 0.906873 115595 115834 411-432 1.000000 82.9 ccsA-ndhD_p4 ccsA-ndhD 4 TCAGCAATTGTGGCGTCTAT ACCCCGATTTCGTTCTTTCA 20 20 45.0 45.0 57.6 57.4 7.4 0.0 0.955953 115595 115834 408-429 1.000000 82.6 ccsA-ndhD_p5 ccsA-ndhD 5 ATTCAGCAATTGTGGCGTCT ACCCCGATTTCGTTCTTTCA 20 20 45.0 45.0 58.5 57.4 7.4 0.0 1.016323 115595 115834 410-431 1.000000 82.1 ndhD-psaC_p1 ndhD-psaC 1 GAACCCGCAAATATTGGCAA CCGACGGATTTCTTGAGTGT 20 20 45.0 50.0 57.3 57.9 15.1 8.6 0.744112 117338 117461 252-263 1.000000 82.8 ndhD-psaC_p2 ndhD-psaC 2 GAACCCGCAAATATTGGCAA ATGGTCTGAAACAACTCGCA 20 20 45.0 45.0 57.3 57.7 15.1 0.0 0.918372 117338 117461 220-231 1.000000 82.4 ndhD-psaC_p3 ndhD-psaC 3 AGGAACCCGCAAATATTGGC CCGACGGATTTCTTGAGTGT 20 20 50.0 50.0 58.9 57.9 4.6 8.6 0.969009 117338 117461 254-265 1.000000 81.0 ndhD-psaC_p4 ndhD-psaC 4 GAACCCGCAAATATTGGCAA TCCGACGGATTTCTTGAGTG 20 20 45.0 50.0 57.3 57.6 15.1 13.9 1.027614 117338 117461 253-264 1.000000 80.5 ndhD-psaC_p5 ndhD-psaC 5 GAACCCGCAAATATTGGCAA AAGAGATGTGAATCCGCCTG 20 20 45.0 50.0 57.3 57.7 15.1 0.0 0.986182 117338 117461 273-284 1.000000 80.2 ycf1_p1 ycf1 1 TTTTTATGTAGCGAAATGGTC ACAGCAGAAGATCGTTCTCC 21 20 33.3 50.0 52.5 57.3 0.0 0.0 7.119113 128520 128639 178-178 1.000000 48.0 ycf1_p2 ycf1 2 TTTTTATGTAGCGAAATGGTC AGGGTGGAAAGTGAGGAAGA 21 20 33.3 50.0 52.5 57.9 0.0 0.0 6.573690 128520 128639 217-217 0.678571 35.1 ycf1_p3 ycf1 3 TTTTTATGTAGCGAAATGGTC ACGGAAGAAAGGGTGGAAAG 21 20 33.3 50.0 52.5 57.7 0.0 0.0 6.727231 128520 128639 226-226 0.678571 35.1 ycf1_p4 ycf1 4 TTTTTATGTAGCGAAATGGTC CGGAAGAAAGGGTGGAAAGT 21 20 33.3 50.0 52.5 57.7 0.0 0.0 6.727231 128520 128639 225-225 0.678571 35.1 ycf1_p5 ycf1 5 TTTTTATGTAGCGAAATGGTC AACGGAAGAAAGGGTGGAAA 21 20 33.3 45.0 52.5 57.3 0.0 0.0 7.195793 128520 128639 227-227 0.678571 35.1