Hotspot

trnT-UGU-trnL-UAA

LSC · 51546-52024 · 479 bp

Back to Bruguiera

Pi 0.0103
MarkerSeek score 52.70
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 522-537 bp 1.0 83.9
trnT-UGU-trnL-UAA_p2 GAGTCGAACCGATGACCATC ACCAATTTCGCCATATCCCC 55.0 50.0 58.2 58.0 553-568 bp 1.0 83.4
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 530-545 bp 1.0 83.3
trnT-UGU-trnL-UAA_p4 GAGTCGAACCGATGACCATC TAGCGTCTACCAATTTCGCC 55.0 50.0 58.2 58.1 561-576 bp 1.0 82.8
trnT-UGU-trnL-UAA_p5 AAAAGCCAGCTATCGGAGTC ACCAATTTCGCCATATCCCC 50.0 50.0 57.7 58.0 568-583 bp 1.0 82.0