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psbA

LSC · 441-1502 · 1062 bp

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Pi 0

MarkerSeek score 40.00

Primer available yes

Label psbA

Feature Metadata

label_name: psbA
feature_type: gene
region: LSC
length_bp: 1062
variable_sites: 0
pi: 0
unique_haplotype_count: 1
primer_available: yes
alignment_reliability: 1.00
markerseek_score: 40.00

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
psbA_p1	CCTCTTGAAATGGATATTGCTCC	AGAATTCGTGTGCTTGGGAG	43.5	50.0	57.3	58.2	1175 bp	1.0	48.9
psbA_p2	CCTCTTGAAATGGATATTGCTCC	AGAGAATTCGTGTGCTTGGG	43.5	50.0	57.3	58.2	1177 bp	1.0	48.9
psbA_p3	CCTCTTGAAATGGATATTGCTCC	GAGAATTCGTGTGCTTGGGA	43.5	50.0	57.3	58.2	1176 bp	1.0	48.8
psbA_p4	AGGAGCAATATCAATCCTCTTGA	AGAATTCGTGTGCTTGGGAG	39.1	50.0	57.1	58.2	1190 bp	1.0	47.3
psbA_p5	AGGAGCAATATCAATCCTCTTGA	AGAGAATTCGTGTGCTTGGG	39.1	50.0	57.1	58.2	1192 bp	1.0	47.3