primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AGTCGCACTTAAAAGCCGAG GCTCAACCGACAAGAACTGT 20 20 50.0 50.0 58.6 58.4 6.4 0.0 0.987484 3912 4492 686-705 1.000000 76.6 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AGTCGCACTTAAAAGCCGAG GTGCTCAACCGACAAGAACT 20 20 50.0 50.0 58.6 58.4 6.4 0.0 0.987484 3912 4492 688-707 1.000000 76.6 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 AGTCGCACTTAAAAGCCGAG TGCTCAACCGACAAGAACTG 20 20 50.0 50.0 58.6 58.4 6.4 0.0 0.988604 3912 4492 687-706 1.000000 76.6 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 TCGCACTTAAAAGCCGAGTA GCTCAACCGACAAGAACTGT 20 20 45.0 50.0 57.3 58.4 3.0 0.0 1.145636 3912 4492 684-703 1.000000 75.4 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 TCGCACTTAAAAGCCGAGTA GTGCTCAACCGACAAGAACT 20 20 45.0 50.0 57.3 58.4 3.0 0.0 1.145636 3912 4492 686-705 1.000000 75.4 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 5577 6319 816-846 1.000000 80.7 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 TCATGTCCTTCAAGTCGCAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 0.0 16.9 0.280333 5577 6319 827-857 1.000000 80.1 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA CTCGGAGGTTCGAATCCTTC 20 20 45.0 55.0 58.1 57.8 8.1 16.9 0.350677 5577 6319 820-850 1.000000 79.6 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 TCATGTCCTTCAAGTCGCAC CTCGGAGGTTCGAATCCTTC 20 20 50.0 55.0 58.2 57.8 0.0 16.9 0.415585 5577 6319 831-861 1.000000 79.0 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGTCGCACGTTGCTTTCTA TACTCGGAGGTTCGAATCCT 20 20 45.0 50.0 58.1 57.6 8.1 16.1 0.571278 5577 6319 822-852 1.000000 77.8 trnS-GCU-psbD_p1 trnS-GCU-psbD 1 ATTAGCAATCCGCCGCTTTA GAGCAATAGGCCAGACCATC 20 20 45.0 55.0 58.0 58.1 0.0 5.0 0.148662 7647 8557 1051-1077 1.000000 82.2 trnS-GCU-psbD_p2 trnS-GCU-psbD 2 ATTAGCAATCCGCCGCTTTA ACAAAAACGAAACGGTCCCT 20 20 45.0 45.0 58.0 58.2 0.0 0.0 0.284276 7647 8557 1029-1055 1.000000 81.2 trnS-GCU-psbD_p3 trnS-GCU-psbD 3 ATTAGCAATCCGCCGCTTTA CCCTTCGTAACCAGTCATCC 20 20 45.0 55.0 58.0 57.7 0.0 0.0 0.349331 7647 8557 1013-1039 1.000000 80.7 trnS-GCU-psbD_p4 trnS-GCU-psbD 4 GAGCGGAAAGAGAGGGATTC GAGCAATAGGCCAGACCATC 20 20 55.0 55.0 57.8 58.1 0.0 5.0 0.343212 7647 8557 1102-1128 1.000000 80.5 trnS-GCU-psbD_p5 trnS-GCU-psbD 5 ATTAGCAATCCGCCGCTTTA AGGCCAGACCATCCTACAAA 20 20 45.0 50.0 58.0 58.3 0.0 5.0 0.369381 7647 8557 1044-1070 1.000000 80.5 trnG-UCC-trnT-GGU_p1 trnG-UCC-trnT-GGU 1 ACGAATCACACTTTTACCACT ACCACTGAGTTAAAAGGGCT 21 20 38.1 45.0 55.5 56.7 0.0 0.0 4.884212 13520 14739 1217-1300 1.000000 46.7 trnG-UCC-trnT-GGU_p2 trnG-UCC-trnT-GGU 2 ACGAATCACACTTTTACCACT TGAACCGATGACTTATGCCT 21 20 38.1 45.0 55.5 56.6 0.0 0.0 4.907539 13520 14739 1254-1337 1.000000 46.5 trnG-UCC-trnT-GGU_p3 trnG-UCC-trnT-GGU 3 GAACGAATCACACTTTTACCACT ACCACTGAGTTAAAAGGGCT 23 20 39.1 45.0 57.3 56.7 0.0 0.0 5.016928 13520 14739 1219-1302 1.000000 45.8 trnG-UCC-trnT-GGU_p4 trnG-UCC-trnT-GGU 4 ACGAATCACACTTTTACCACT CCGATGACTTATGCCTTACCA 21 21 38.1 47.6 55.5 57.5 0.0 0.0 5.004851 13520 14739 1250-1333 1.000000 45.7 trnG-UCC-trnT-GGU_p5 trnG-UCC-trnT-GGU 5 ACGAATCACACTTTTACCACT ACCGATGACTTATGCCTTACC 21 21 38.1 47.6 55.5 57.5 0.0 0.0 5.006487 13520 14739 1251-1334 1.000000 45.7 trnY-GUA-trnD-GUC_p1 trnY-GUA-trnD-GUC 1 AATTCTTCCTGGGTCGATGC CGGTGCTCTGACCAATTGAA 20 20 50.0 50.0 58.0 58.5 0.0 7.1 0.521454 15555 15903 472-483 1.000000 78.4 trnY-GUA-trnD-GUC_p2 trnY-GUA-trnD-GUC 2 GGGGACGGACTGTAAATTCG CGGTGCTCTGACCAATTGAA 20 20 55.0 50.0 58.4 58.5 0.0 7.1 0.828828 15555 15903 439-450 1.000000 76.1 trnY-GUA-trnD-GUC_p3 trnY-GUA-trnD-GUC 3 GGGACGGACTGTAAATTCGT CGGTGCTCTGACCAATTGAA 20 20 50.0 50.0 57.6 58.5 0.0 7.1 0.852505 15555 15903 438-449 1.000000 75.9 trnY-GUA-trnD-GUC_p4 trnY-GUA-trnD-GUC 4 AATTCTTCCTGGGTCGATGC GGTGCTCTGACCAATTGAAC 20 20 50.0 50.0 58.0 57.0 0.0 7.1 1.041608 15555 15903 471-482 1.000000 74.2 trnY-GUA-trnD-GUC_p5 trnY-GUA-trnD-GUC 5 GATGCCCGAGTGGTTAATGG CGGTGCTCTGACCAATTGAA 20 20 55.0 50.0 58.7 58.5 0.0 7.1 1.168334 15555 15903 457-468 1.000000 73.3 petN-trnC-GCA_p1 petN-trnC-GCA 1 AGTCCACTCCTTCCCCATAC AGTTCAAATCTGGGTGCCG 20 19 55.0 52.6 58.1 58.1 0.0 0.0 1.172113 17667 18597 913-1044 1.000000 76.8 petN-trnC-GCA_p2 petN-trnC-GCA 2 GTCCACTCCTTCCCCATACT AGTTCAAATCTGGGTGCCG 20 19 55.0 52.6 58.1 58.1 0.0 0.0 1.172113 17667 18597 912-1043 1.000000 76.8 petN-trnC-GCA_p3 petN-trnC-GCA 3 AGCCCAAGCGAGACTTACTA AGTTCAAATCTGGGTGCCG 20 19 50.0 52.6 58.2 58.1 0.0 0.0 1.204402 17667 18597 854-985 1.000000 76.7 petN-trnC-GCA_p4 petN-trnC-GCA 4 GTCCACTCCTTCCCCATACT CCAGTTCAAATCTGGGTGCC 20 20 55.0 55.0 58.1 59.1 0.0 4.3 1.228376 17667 18597 914-1045 1.000000 76.4 petN-trnC-GCA_p5 petN-trnC-GCA 5 AGTCCACTCCTTCCCCATAC CCAGTTCAAATCTGGGTGCC 20 20 55.0 55.0 58.1 59.1 0.0 4.3 1.228376 17667 18597 915-1046 1.000000 76.3 trnC-GCA-rpoB_p1 trnC-GCA-rpoB 1 AAAGGATTTGCAGTCCCCTG ATTCCCTCGTTTCCATTCCG 20 20 50.0 50.0 58.1 58.0 14.6 0.0 0.109519 18669 19833 1222-1235 1.000000 82.7 trnC-GCA-rpoB_p2 trnC-GCA-rpoB 2 AAAGGATTTGCAGTCCCCTG TGTGGACATTCCCTCGTTTC 20 20 50.0 50.0 58.1 57.8 14.6 0.0 0.250044 18669 19833 1229-1242 1.000000 81.6 trnC-GCA-rpoB_p3 trnC-GCA-rpoB 3 AAAGGATTTGCAGTCCCCTG CCGGGTATTGTGGACATTCC 20 20 50.0 55.0 58.1 58.3 14.6 0.0 0.395580 18669 19833 1237-1250 1.000000 80.4 trnC-GCA-rpoB_p4 trnC-GCA-rpoB 4 AAAGGATTTGCAGTCCCCTG CGGGTATTGTGGACATTCCC 20 20 50.0 55.0 58.1 58.3 14.6 0.0 0.395580 18669 19833 1236-1249 1.000000 80.4 trnC-GCA-rpoB_p5 trnC-GCA-rpoB 5 AAAGGATTTGCAGTCCCCTG AAGTTCTTCTGCCAAGGCTT 20 20 50.0 45.0 58.1 57.6 14.6 13.0 0.442790 18669 19833 1301-1314 1.000000 79.8 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TCATATTCGTGAAGCAGAAACA GGTTCGAATCCGTATAGCCC 22 20 36.4 55.0 56.1 57.9 0.0 0.0 3.962644 50259 51177 964-1074 1.000000 53.0 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TCATATTCGTGAAGCAGAAACA CGGTTCGAATCCGTATAGCC 22 20 36.4 55.0 56.1 58.3 0.0 22.8 4.192025 50259 51177 965-1075 1.000000 51.2 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 CATATTCGTGAAGCAGAAACA GGTTCGAATCCGTATAGCCC 21 20 38.1 55.0 54.6 57.9 0.0 0.0 4.464233 50259 51177 963-1073 1.000000 49.0 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 ATCATATTCGTGAAGCAGAAACA GGTTCGAATCCGTATAGCCC 23 20 34.8 55.0 56.6 57.9 0.0 0.0 4.466592 50259 51177 965-1075 1.000000 49.0 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TCATATTCGTGAAGCAGAAACAT GGTTCGAATCCGTATAGCCC 23 20 34.8 55.0 56.6 57.9 0.0 0.0 4.466592 50259 51177 964-1074 1.000000 49.0 rbcL-psaI_p1 rbcL-psaI 1 GCCGGTAGATACTATCGATT GTCATTGCAATTGCCGGAAA 20 20 45.0 45.0 54.0 57.9 1.7 26.9 4.110798 56357 58069 869-1806 0.800000 45.5 rbcL-psaI_p2 rbcL-psaI 2 GCCGGTAGATACTATCGATT GAAGTCATTGCAATTGCCGG 20 20 45.0 50.0 54.0 58.4 1.7 26.9 4.400963 56357 58069 872-1809 0.800000 43.2 rbcL-psaI_p3 rbcL-psaI 3 GCCGGTAGATACTATCGATT AGAAGTCATTGCAATTGCCG 20 20 45.0 45.0 54.0 57.4 1.7 26.9 4.675524 56357 58069 873-1810 0.800000 41.0 rbcL-psaI_p4 rbcL-psaI 4 GCCGGTAGATACTATCGATT AAGTCATTGCAATTGCCGGA 20 20 45.0 45.0 54.0 58.7 1.7 26.9 4.777503 56357 58069 871-1808 0.800000 40.2 rbcL-psaI_p5 rbcL-psaI 5 GCCGGTAGATACTATCGATT AGTCATTGCAATTGCCGGAA 20 20 45.0 45.0 54.0 58.7 1.7 26.9 4.777503 56357 58069 870-1807 0.800000 40.2 trnP-UGG-psaJ_p1 trnP-UGG-psaJ 1 AAAACAAACGCGCTACCAAG ACGGGTGCTACAGAGAGATA 20 20 45.0 50.0 57.9 57.3 5.7 0.0 0.844845 64874 65271 452-471 1.000000 78.1 trnP-UGG-psaJ_p2 trnP-UGG-psaJ 2 CAAAACAAACGCGCTACCAA ACGGGTGCTACAGAGAGATA 20 20 45.0 50.0 58.2 57.3 5.7 0.0 0.902103 64874 65271 453-472 1.000000 77.6 trnP-UGG-psaJ_p3 trnP-UGG-psaJ 3 ATCTCGTCGCTACTGCCTAT ACGGGTGCTACAGAGAGATA 20 20 50.0 50.0 58.1 57.3 0.0 0.0 0.832033 64874 65271 532-551 1.000000 77.5 trnP-UGG-psaJ_p4 trnP-UGG-psaJ 4 TTGTACCCAAAACAAACGCG ACGGGTGCTACAGAGAGATA 20 20 45.0 50.0 57.8 57.3 3.5 0.0 0.921259 64874 65271 460-479 1.000000 77.4 trnP-UGG-psaJ_p5 trnP-UGG-psaJ 5 ATTGATCTCGTCGCTACTGC ACGGGTGCTACAGAGAGATA 20 20 50.0 50.0 57.9 57.3 0.0 0.0 0.857848 64874 65271 536-555 1.000000 77.2 rpl22-rps19_p1 rpl22-rps19 1 CGAGTTTCCTTAGCCCACTT CAAATTGGGGGAATTCGTGC 20 20 50.0 50.0 57.5 58.0 0.0 0.0 0.483162 81232 81310 225-228 1.000000 79.3 rpl22-rps19_p2 rpl22-rps19 2 CGAGTTTCCTTAGCCCACTT GCAAATTGGGGGAATTCGTG 20 20 50.0 50.0 57.5 58.0 0.0 0.0 0.483162 81232 81310 226-229 1.000000 79.3 rpl22-rps19_p3 rpl22-rps19 3 CGAGTTTCCTTAGCCCACTT ATGGTAGGTCGCAAATTGGG 20 20 50.0 50.0 57.5 58.2 0.0 3.4 0.711702 81232 81310 236-239 1.000000 77.3 rpl22-rps19_p4 rpl22-rps19 4 CGAGTTTCCTTAGCCCACTT GTCGCAAATTGGGGGAATTC 20 20 50.0 50.0 57.5 57.7 0.0 10.2 0.768087 81232 81310 229-232 1.000000 77.0 rpl22-rps19_p5 rpl22-rps19 5 CTTGCGAGTTTCCTTAGCCC CAAATTGGGGGAATTCGTGC 20 20 55.0 50.0 58.9 58.0 0.0 0.0 0.921251 81232 81310 229-232 1.000000 75.7 ndhH_p1 ndhH 1 TTTGATGAGCCTCGCTTTGA ATGGAGTGGGTCTTGCTAGT 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.225190 102664 102999 443-553 1.000000 89.9 ndhH_p2 ndhH 2 CTTTTGGGAAAACGTCGACG ATGGAGTGGGTCTTGCTAGT 20 20 50.0 50.0 58.0 58.0 34.6 0.0 0.054997 102664 102999 631-742 1.000000 89.5 ndhH_p3 ndhH 3 TCGACGTTTGCTGGCTTATT ATGGAGTGGGTCTTGCTAGT 20 20 45.0 50.0 58.2 58.0 0.0 0.0 0.238378 102664 102999 617-728 1.000000 88.2 ndhH_p4 ndhH 4 CTTTTGGGAAAACGTCGACG TGGAGTGGGTCTTGCTAGTT 20 20 50.0 50.0 58.0 58.3 34.6 0.0 0.283699 102664 102999 630-741 1.000000 87.7 ndhH_p5 ndhH 5 GCCGGAAGATGGATGCATAT ATGGAGTGGGTCTTGCTAGT 20 20 50.0 50.0 57.9 58.0 5.0 0.0 0.161513 102664 102999 1114-1225 1.000000 86.6 ndhH-ndhF_p1 ndhH-ndhF 1 AAAATCGCGGAAAACCGAAC ATGGAGTGGGTCTTGCTAGT 20 20 45.0 50.0 58.0 58.0 6.1 0.0 0.082426 103000 103014 213-323 1.000000 91.3 ndhH-ndhF_p2 ndhH-ndhF 2 AACACCCATCAATGCATGGT ATGGAGTGGGTCTTGCTAGT 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.100335 103000 103014 317-427 1.000000 91.2 ndhH-ndhF_p3 ndhH-ndhF 3 ACCCATCAATGCATGGTGTT ATGGAGTGGGTCTTGCTAGT 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.100335 103000 103014 314-424 1.000000 91.2 ndhH-ndhF_p4 ndhH-ndhF 4 TCGCGGAAAACCGAACTATT ATGGAGTGGGTCTTGCTAGT 20 20 45.0 50.0 57.9 58.0 6.1 0.0 0.124878 103000 103014 209-319 1.000000 91.0 ndhH-ndhF_p5 ndhH-ndhF 5 CTTTTGGGAAAACGTCGACG ATGGAGTGGGTCTTGCTAGT 20 20 50.0 50.0 58.0 58.0 34.6 0.0 0.054997 103000 103014 631-742 1.000000 89.5 ndhF_p1 ndhF 1 AAAATCGCGGAAAACCGAAC ATGGTACGGAAGCCTATCCC 20 20 45.0 55.0 58.0 58.7 6.1 0.0 0.691648 103015 105234 2820-3000 0.800000 73.4 ndhF_p2 ndhF 2 TCGCGGAAAACCGAACTATT CGGAAGCCTATCCCCCATAT 20 20 45.0 55.0 57.9 58.4 6.1 0.0 0.498442 103015 105234 2810-2999 0.600000 65.6 ndhF_p3 ndhF 3 ATCGCGGAAAACCGAACTAT CGGAAGCCTATCCCCCATAT 20 20 45.0 55.0 57.7 58.4 6.1 0.0 0.720027 103015 105234 2811-3000 0.600000 63.9 ndhF_p4 ndhF 4 AAAATCGCGGAAAACCGAAC CGGAAGCCTATCCCCCATAT 20 20 45.0 55.0 58.0 58.4 6.1 0.0 0.455990 103015 105234 2814-2994 0.400000 57.9 ndhF_p5 ndhF 5 AATCGCGGAAAACCGAACTA CGGAAGCCTATCCCCCATAT 20 20 45.0 55.0 57.9 58.4 6.1 0.0 0.498442 103015 105234 2812-2992 0.400000 57.6 ndhF-rpl32_p1 ndhF-rpl32 1 GGAAGTGGGAGAAGAGGGAT TTGACATTGAAGTACGTTTTT 20 21 55.0 28.6 58.1 52.2 0.0 0.0 6.891734 105235 106108 894-967 1.000000 47.2 ndhF-rpl32_p2 ndhF-rpl32 2 GGAAGTGGGAGAAGAGGGAT TTTGACATTGAAGTACGTTTT 20 21 55.0 28.6 58.1 52.2 0.0 0.0 6.891734 105235 106108 895-968 1.000000 47.2 ndhF-rpl32_p3 ndhF-rpl32 3 GGAAGTGGGAGAAGAGGGAT TTTTGACATTGAAGTACGTTT 20 21 55.0 28.6 58.1 52.2 0.0 0.0 6.891734 105235 106108 896-969 1.000000 47.2 ndhF-rpl32_p4 ndhF-rpl32 4 GGAAGTGGGAGAAGAGGGAT TTTTTGACATTGAAGTACGTT 20 21 55.0 28.6 58.1 52.2 0.0 0.0 6.891734 105235 106108 897-970 1.000000 47.2 ndhF-rpl32_p5 ndhF-rpl32 5 GGAAGTGGGAGAAGAGGGAT TCCAAATATTTTTACGAATACGCT 20 24 55.0 29.2 58.1 55.3 0.0 0.0 6.833076 105235 106108 921-994 1.000000 47.1 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 AAGGGTTTTTCTGGGCAACA TTCGAACCGAGATGCTTGAG 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.130936 106289 107028 719-845 1.000000 85.3 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 AGGGTTTTTCTGGGCAACAA TTCGAACCGAGATGCTTGAG 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.130936 106289 107028 718-844 1.000000 85.3 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AAGGGTTTTTCTGGGCAACA GGATTCGAACCGAGATGCTT 20 20 45.0 50.0 58.1 58.1 0.0 0.0 0.185902 106289 107028 722-848 1.000000 84.8 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 AGGGTTTTTCTGGGCAACAA GGATTCGAACCGAGATGCTT 20 20 45.0 50.0 58.1 58.1 0.0 0.0 0.185902 106289 107028 721-847 1.000000 84.8 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AGGGTTTTTCTGGGCAACAA TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 58.1 57.9 0.0 0.0 0.251505 106289 107028 691-817 1.000000 84.4