primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 GTCTTACAAACGCTCCCGAT AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.0 58.0 0.0 7.6 0.030311 4329 5384 1239-1264 1.000000 89.5 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 CCTTTCAGGATCAGTCGTGG AAAAAGGCGCTCAACCTACA 20 20 55.0 45.0 58.0 58.0 0.0 7.6 0.040076 4329 5384 1258-1283 1.000000 89.3 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 CTCGTTGCTTTTCGTTTCCC AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.0 58.0 0.0 7.6 0.056754 4329 5384 1444-1490 1.000000 88.1 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 TCTTACAAACGCTCCCGATG AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.0 58.0 0.0 7.6 0.028923 4329 5384 1238-1263 0.857143 83.1 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 TCTTACAAACGCTCCCGATG CAAAAAGGGGTGTGTTGCTG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.065957 4329 5384 1850-1874 0.857143 80.0 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CCGACGCTTTAATCCACTCA AACTGAAGGACCCCTTAACT 20 20 50.0 45.0 58.0 55.6 0.0 0.0 2.358270 9462 10407 891-1077 1.000000 67.0 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 ACGGAAAGAGAGGGATTCGA AACTGAAGGACCCCTTAACT 20 20 50.0 45.0 58.2 55.6 0.0 0.0 2.505036 9462 10407 949-1135 1.000000 65.7 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 CCGACGCTTTAATCCACTCA AAACTGAAGGACCCCTTAACT 20 21 50.0 42.9 58.0 56.5 0.0 0.0 2.548347 9462 10407 892-1078 1.000000 65.5 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 ACGCTTTAATCCACTCAGCC AACTGAAGGACCCCTTAACT 20 20 50.0 45.0 58.3 55.6 0.0 0.0 2.614621 9462 10407 888-1074 1.000000 65.0 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 CGCTTTAATCCACTCAGCCA AACTGAAGGACCCCTTAACT 20 20 50.0 45.0 58.3 55.6 0.0 0.0 2.615850 9462 10407 887-1073 1.000000 64.9 atpF-atpH_p1 atpF-atpH 1 CCAGTGAACCAAGGAAACGA CCTGAGGCAGAGGGAAAAAT 20 20 50.0 50.0 58.0 57.5 0.0 0.0 0.559753 14488 15003 643-693 1.000000 81.9 atpF-atpH_p2 atpF-atpH 2 CAAATGGCCAGTGAACCAAG CCTGAGGCAGAGGGAAAAAT 20 20 50.0 50.0 57.6 57.5 13.0 0.0 0.965434 14488 15003 650-700 1.000000 78.6 atpF-atpH_p3 atpF-atpH 3 CCAGTGAACCAAGGAAACGA TGGACTGGTTGTAGCATTAGC 20 21 50.0 47.6 58.0 58.0 0.0 0.0 1.052311 14488 15003 572-622 1.000000 78.2 atpF-atpH_p4 atpF-atpH 4 CCAGTGAACCAAGGAAACGA GCAGAGGGAAAAATACGAGGT 20 21 50.0 47.6 58.0 58.0 0.0 0.0 1.050974 14488 15003 637-687 1.000000 78.0 atpF-atpH_p5 atpF-atpH 5 CCAGTGAACCAAGGAAACGA TGAGGCAGAGGGAAAAATACG 20 21 50.0 47.6 58.0 58.0 0.0 0.0 1.052311 14488 15003 641-691 1.000000 78.0 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 GCATTTCCATCTCCGAGCAT TTGTTAATCAGGCGACACCC 20 20 50.0 50.0 58.4 58.2 0.0 0.0 0.581615 28152 29385 1329-1342 1.000000 77.1 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 GCATTTCCATCTCCGAGCAT AAAAGGATTTGCAGTCCCCC 20 20 50.0 50.0 58.4 58.4 0.0 14.6 0.753180 28152 29385 1293-1306 1.000000 75.4 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 TTTCCGCATTTCCATCTCCG TTGTTAATCAGGCGACACCC 20 20 50.0 50.0 58.6 58.2 0.0 0.0 0.805395 28152 29385 1334-1347 1.000000 75.3 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 GCATTTCCATCTCCGAGCAT GCGACACCCAGATTTGAACT 20 20 50.0 50.0 58.4 58.5 0.0 0.0 0.873932 28152 29385 1318-1331 1.000000 74.5 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 GCATTTCCATCTCCGAGCAT TAATCAGGCGACACCCAGAT 20 20 50.0 50.0 58.4 58.5 0.0 0.0 0.901630 28152 29385 1325-1338 1.000000 74.3 trnC-GCA-petN_p1 trnC-GCA-petN 1 ACAAAACAAGCAAAGGGGGA AGCCCAAGCGAGACTTACTA 20 20 45.0 50.0 58.1 58.2 0.0 0.0 0.278576 29457 30199 850-888 1.000000 82.3 trnC-GCA-petN_p2 trnC-GCA-petN 2 TTGTATCCTTTTGGCGGCAT AGCCCAAGCGAGACTTACTA 20 20 45.0 50.0 58.2 58.2 14.3 0.0 0.305342 29457 30199 815-853 1.000000 82.3 trnC-GCA-petN_p3 trnC-GCA-petN 3 GGGGGACTGCAAATCCTTTT AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.4 58.2 14.7 0.0 0.506839 29457 30199 779-817 1.000000 80.9 trnC-GCA-petN_p4 trnC-GCA-petN 4 ACAAAACAAGCAAAGGGGGA AGAGTCCACTTCTTCCCCAT 20 20 45.0 50.0 58.1 57.6 0.0 0.0 0.478090 29457 30199 911-949 1.000000 80.4 trnC-GCA-petN_p5 trnC-GCA-petN 5 TTGTATCCTTTTGGCGGCAT AGAGTCCACTTCTTCCCCAT 20 20 45.0 50.0 58.2 57.6 14.3 0.0 0.504856 29457 30199 876-914 1.000000 80.4 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 GGGATAGCTCAGCTGGTAGA ATCCACGGCTGAAACGTATC 20 20 55.0 50.0 58.0 58.1 10.3 0.0 0.066573 50959 51532 617-748 1.000000 86.5 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 GGGATAGCTCAGCTGGTAGA AGTTGGATAGGATGGCCCTT 20 20 55.0 50.0 58.0 58.1 10.3 0.0 0.089643 50959 51532 585-716 1.000000 86.5 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 CCTCGTGTCACCAGTTCAAA ATCCACGGCTGAAACGTATC 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.115963 50959 51532 581-712 1.000000 86.3 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 CCTCGTGTCACCAGTTCAAA AGTTGGATAGGATGGCCCTT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.139034 50959 51532 549-680 1.000000 86.3 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 CTGGTAGAGCAGAGGACTGA ATCCACGGCTGAAACGTATC 20 20 55.0 50.0 57.9 58.1 2.5 0.0 0.200366 50959 51532 605-736 1.000000 85.5 trnW-CCA-trnP-UGG_p1 trnW-CCA-trnP-UGG 1 GTTTTGGAGACCCACGTTCT GTCACGGGTTCAAATCCTGT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.144618 69261 69453 255-267 1.000000 84.7 trnW-CCA-trnP-UGG_p2 trnW-CCA-trnP-UGG 2 GTTTTGGAGACCCACGTTCT CACGGGTTCAAATCCTGTCA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.145952 69261 69453 253-265 1.000000 84.7 trnW-CCA-trnP-UGG_p3 trnW-CCA-trnP-UGG 3 GTTTTGGAGACCCACGTTCT TGTCACGGGTTCAAATCCTG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.145952 69261 69453 256-268 1.000000 84.6 trnW-CCA-trnP-UGG_p4 trnW-CCA-trnP-UGG 4 GTTTTGGAGACCCACGTTCT GGGTACAAAATGTCACGGGT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.136582 69261 69453 266-278 1.000000 84.5 trnW-CCA-trnP-UGG_p5 trnW-CCA-trnP-UGG 5 GTTTTGGAGACCCACGTTCT TGGGTACAAAATGTCACGGG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.137926 69261 69453 267-279 1.000000 84.5 clpP_p1 clpP 1 TCGTGTATTTGCGTGAAATCG ACGCTTCCACATCAAAGTGA 21 20 42.9 45.0 57.6 57.7 0.0 3.0 1.616827 72930 74991 2151-2159 1.000000 68.3 clpP_p2 clpP 2 TGGAAATCGTGTATTTGCGTG ACGCTTCCACATCAAAGTGA 21 20 42.9 45.0 57.5 57.7 0.0 3.0 1.718079 72930 74991 2157-2165 1.000000 67.5 clpP_p3 clpP 3 GGAAATCGTGTATTTGCGTGA ACGCTTCCACATCAAAGTGA 21 20 42.9 45.0 57.3 57.7 0.0 3.0 1.987569 72930 74991 2156-2164 1.000000 65.4 clpP_p4 clpP 4 CGTGTATTTGCGTGAAATCG ACGCTTCCACATCAAAGTGA 20 20 45.0 45.0 56.2 57.7 0.0 3.0 2.080671 72930 74991 2150-2158 1.000000 64.6 clpP_p5 clpP 5 TGGAAATCGTGTATTTGCGT ACGCTTCCACATCAAAGTGA 20 20 40.0 45.0 56.1 57.7 0.0 3.0 2.189770 72930 74991 2157-2165 1.000000 63.7 clpP-psbB_p1 clpP-psbB 1 CGCACTATACGTCAACCCAA CGATACCAAGGCAAACCCAT 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.238244 74992 75429 509-534 1.000000 83.1 clpP-psbB_p2 clpP-psbB 2 CGCACTATACGTCAACCCAA CAAACGACCGGGATCATTCA 20 20 50.0 50.0 58.0 58.3 0.0 6.3 0.268011 74992 75429 546-571 1.000000 82.8 clpP-psbB_p3 clpP-psbB 3 GACAGGTCGCACTATACGTC CGATACCAAGGCAAACCCAT 20 20 55.0 50.0 57.9 58.2 0.0 0.0 0.339767 74992 75429 516-541 1.000000 82.3 clpP-psbB_p4 clpP-psbB 4 CTGACAGGTCGCACTATACG CGATACCAAGGCAAACCCAT 20 20 55.0 50.0 57.9 58.2 0.0 0.0 0.344042 74992 75429 518-543 1.000000 82.3 clpP-psbB_p5 clpP-psbB 5 GACAGGTCGCACTATACGTC CAAACGACCGGGATCATTCA 20 20 55.0 50.0 57.9 58.3 0.0 6.3 0.369534 74992 75429 553-578 1.000000 82.0 trnR-ACG-trnN-GUU_p1 trnR-ACG-trnN-GUU 1 TAGGGTACTTCCGGGAACAG ATGAGATAGAACCTCCCGCA 20 20 55.0 50.0 58.1 57.9 5.1 0.0 0.231475 111653 112260 813-815 1.000000 79.1 trnR-ACG-trnN-GUU_p2 trnR-ACG-trnN-GUU 2 TAGGGTACTTCCGGGAACAG TGGGTTGAGAACGGGAATTG 20 20 55.0 50.0 58.1 58.1 5.1 0.0 0.239084 111653 112260 839-841 1.000000 79.0 trnR-ACG-trnN-GUU_p3 trnR-ACG-trnN-GUU 3 TAGGGTACTTCCGGGAACAG AGATAGAACCTCCCGCAGTT 20 20 55.0 50.0 58.1 58.1 5.1 0.0 0.276008 111653 112260 810-812 1.000000 78.8 trnR-ACG-trnN-GUU_p4 trnR-ACG-trnN-GUU 4 TAGGGTACTTCCGGGAACAG GCTGTTAACTGACTGGTCGT 20 20 55.0 50.0 58.1 57.8 5.1 15.9 0.293768 111653 112260 762-764 1.000000 78.7 trnR-ACG-trnN-GUU_p5 trnR-ACG-trnN-GUU 5 TAGGGTACTTCCGGGAACAG TGGTCGTAGGTTCGAATCCT 20 20 55.0 50.0 58.1 58.2 5.1 18.9 0.300003 111653 112260 749-751 1.000000 78.7 ndhF_p1 ndhF 1 GCAGAATACCGTCACCGATT AGAGCCGGTGAATCAGAAAC 20 20 50.0 50.0 58.1 57.9 0.0 1.9 0.164672 113666 115900 2560-2607 1.000000 80.6 ndhF_p2 ndhF 2 CCTCGGAAAGGCAAGAAAGT AGAGCCGGTGAATCAGAAAC 20 20 50.0 50.0 58.1 57.9 0.0 1.9 0.203045 113666 115900 2518-2565 1.000000 80.3 ndhF_p3 ndhF 3 GCAGAATACCGTCACCGATT GAGCCGGTGAATCAGAAACA 20 20 50.0 50.0 58.1 58.2 0.0 1.9 0.255657 113666 115900 2559-2606 1.000000 79.8 ndhF_p4 ndhF 4 AGGGGGACTAAACAGGAACA AGAGCCGGTGAATCAGAAAC 20 20 50.0 50.0 57.9 57.9 0.0 1.9 0.228256 113666 115900 2464-2512 0.857143 73.6 ndhF_p5 ndhF 5 GTCGAAAGAGAGGGGGACTA AGAGCCGGTGAATCAGAAAC 20 20 55.0 50.0 57.9 57.9 0.0 1.9 0.241443 113666 115900 2474-2474 0.714286 67.0 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GGCGTTGAAAGCTTTTTCGT AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 58.2 58.0 14.0 0.0 0.172709 117155 118388 1232-1364 1.000000 86.5 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GGCGTTGAAAGCTTTTTCGT CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 58.2 58.0 14.0 0.0 0.174080 117155 118388 1233-1365 1.000000 86.5 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GGCGTTGAAAGCTTTTTCGT TCGAACCGAGATGCTTTAGC 20 20 45.0 50.0 58.2 58.1 14.0 0.0 0.242309 117155 118388 1268-1400 1.000000 85.8 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GGCGTTGAAAGCTTTTTCGT TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 58.2 57.9 14.0 0.0 0.289156 117155 118388 1242-1374 1.000000 85.5 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GGCGTTGAAAGCTTTTTCGT TCCAATCGAAACGACCGAAA 20 20 45.0 45.0 58.2 57.8 14.0 0.0 0.316760 117155 118388 1457-1583 1.000000 85.2 ccsA-ndhD_p1 ccsA-ndhD 1 TGTGGCTTCTATGGGCTTTC CGTGGACAAAGTCGAAGCTA 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.189096 119550 119882 444-476 1.000000 89.7 ccsA-ndhD_p2 ccsA-ndhD 2 TGTGGCTTCTATGGGCTTTC ATCCGTGGACAAAGTCGAAG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.209057 119550 119882 447-479 1.000000 89.5 ccsA-ndhD_p3 ccsA-ndhD 3 TTCCGCAATTGTGGCTTCTA CGTGGACAAAGTCGAAGCTA 20 20 45.0 50.0 57.8 57.9 29.6 0.0 0.252989 119550 119882 453-485 1.000000 89.0 ccsA-ndhD_p4 ccsA-ndhD 4 TTCCGCAATTGTGGCTTCTA ATCCGTGGACAAAGTCGAAG 20 20 45.0 50.0 57.8 57.9 29.6 0.0 0.272950 119550 119882 456-488 1.000000 88.8 ccsA-ndhD_p5 ccsA-ndhD 5 AATTCCGCAATTGTGGCTTC CGTGGACAAAGTCGAAGCTA 20 20 45.0 50.0 57.6 57.9 29.6 0.0 0.428980 119550 119882 455-487 1.000000 87.6 ndhD_p1 ndhD 1 AAAGGCGTCTGGTTCCAATT AAACAACTCGAAGCATGGGT 20 20 45.0 45.0 58.0 58.0 0.0 0.0 0.023367 119883 121244 1854-1890 1.000000 82.6 ndhD_p2 ndhD 2 AAAGGCGTCTGGTTCCAATT TCTGCTCCAAGAACAGAGGA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.020080 119883 121244 1948-1984 1.000000 82.5 ndhD_p3 ndhD 3 AAAGGCGTCTGGTTCCAATT GGCATGAAACAACTCGAAGC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.035520 119883 121244 1860-1896 1.000000 82.5 ndhD_p4 ndhD 4 AAAGGCGTCTGGTTCCAATT CTGCTCCAAGAACAGAGGAC 20 20 45.0 55.0 58.0 57.9 0.0 0.0 0.096476 119883 121244 1947-1983 1.000000 81.9 ndhD_p5 ndhD 5 AAAGGCGTCTGGTTCCAATT TGCTTCTGCTCCAAGAACAG 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.116409 119883 121244 1952-1988 1.000000 81.7 ycf1_p1 ycf1 1 TGCGGGCGATATTTTTAGCT ACTCCCAACGCTCAAACAAT 20 20 45.0 45.0 58.0 58.0 0.0 0.0 0.056950 131404 131523 667-769 1.000000 89.8 ycf1_p2 ycf1 2 ACCACTCGGCAACTTGAAAT ACTCCCAACGCTCAAACAAT 20 20 45.0 45.0 58.0 58.0 0.0 0.0 0.037487 131404 131523 694-796 1.000000 89.5 ycf1_p3 ycf1 3 CGTTTTAGGGGTGGACCAAA ACTCCCAACGCTCAAACAAT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.034678 131404 131523 959-1061 1.000000 86.9 ycf1_p4 ycf1 4 CGTTTTAGGGGTGGACCAAA TTCAACTCCCAACGCTCAAA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.061496 131404 131523 963-1065 1.000000 86.7 ycf1_p5 ycf1 5 CGTTTTAGGGGTGGACCAAA TTTCAACTCCCAACGCTCAA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.061496 131404 131523 964-1066 1.000000 86.7 trnN-GUU-trnR-ACG_p1 trnN-GUU-trnR-ACG 1 ATGAGATAGAACCTCCCGCA TAGGGTACTTCCGGGAACAG 20 20 50.0 55.0 57.9 58.1 0.0 5.1 0.231475 133799 134406 813-815 1.000000 79.1 trnN-GUU-trnR-ACG_p2 trnN-GUU-trnR-ACG 2 TGGGTTGAGAACGGGAATTG TAGGGTACTTCCGGGAACAG 20 20 50.0 55.0 58.1 58.1 0.0 5.1 0.239084 133799 134406 839-841 1.000000 79.0 trnN-GUU-trnR-ACG_p3 trnN-GUU-trnR-ACG 3 AGATAGAACCTCCCGCAGTT TAGGGTACTTCCGGGAACAG 20 20 50.0 55.0 58.1 58.1 0.0 5.1 0.276008 133799 134406 810-812 1.000000 78.8 trnN-GUU-trnR-ACG_p4 trnN-GUU-trnR-ACG 4 GCTGTTAACTGACTGGTCGT TAGGGTACTTCCGGGAACAG 20 20 50.0 55.0 57.8 58.1 15.9 5.1 0.293768 133799 134406 762-764 1.000000 78.7 trnN-GUU-trnR-ACG_p5 trnN-GUU-trnR-ACG 5 TGGTCGTAGGTTCGAATCCT TAGGGTACTTCCGGGAACAG 20 20 50.0 55.0 58.2 58.1 18.9 5.1 0.300003 133799 134406 749-751 1.000000 78.7