primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 TAGGCTGGTTCCTATAGGCC GAACTTAGCTTCCGTCTGGG 20 20 55.0 55.0 58.0 58.0 14.5 0.0 0.037176 1431 1715 1428-1495 0.250000 51.2 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 TAGGCTGGTTCCTATAGGCC GGAACTTAGCTTCCGTCTGG 20 20 55.0 55.0 58.0 58.0 14.5 0.0 0.037176 1431 1715 1429-1496 0.250000 51.2 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 GCCTTGACCTACTTGGCTAC GAACTTAGCTTCCGTCTGGG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.037129 1431 1715 981-981 0.125000 44.7 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 GCCTTGACCTACTTGGCTAC GGAACTTAGCTTCCGTCTGG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.037129 1431 1715 982-982 0.125000 44.7 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GCCTTGACCTACTTGGCTAC GGGAACTTAGCTTCCGTCTG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.037129 1431 1715 983-983 0.125000 44.7 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AAAGCCGAGTACTCTACCGT ATTTCAAAGAAGGCGGGTGT 20 20 50.0 45.0 58.2 58.0 20.3 0.0 0.173044 5697 6490 865-942 1.000000 87.6 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAGCCGAGTACTCTACCGTT ATTTCAAAGAAGGCGGGTGT 20 20 50.0 45.0 58.2 58.0 20.3 0.0 0.173044 5697 6490 864-941 1.000000 87.6 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 AAGCCGAGTACTCTACCGTT TCAAAGAAGGCGGGTGTTTT 20 20 50.0 45.0 58.2 58.2 20.3 0.0 0.398125 5697 6490 861-938 1.000000 85.9 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AAGCCGAGTACTCTACCGTT TTCAAAGAAGGCGGGTGTTT 20 20 50.0 45.0 58.2 58.2 20.3 0.0 0.398125 5697 6490 862-939 1.000000 85.9 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AAGCCGAGTACTCTACCGTT TTTCAAAGAAGGCGGGTGTT 20 20 50.0 45.0 58.2 58.2 20.3 0.0 0.398125 5697 6490 863-940 1.000000 85.9 psbK-psbI_p1 psbK-psbI 1 GTTTGGCAAGCTGCTGTAAG ACGCCCCGGATCATTAGATA 20 20 50.0 50.0 57.9 58.1 1.4 0.7 0.123073 8945 9434 594-619 1.000000 85.8 psbK-psbI_p2 psbK-psbI 2 GTTTGGCAAGCTGCTGTAAG TACGCCCCGGATCATTAGAT 20 20 50.0 50.0 57.9 58.1 1.4 0.7 0.123073 8945 9434 595-620 1.000000 85.8 psbK-psbI_p3 psbK-psbI 3 CTTTTGTTTGGCAAGCTGCT ACGCCCCGGATCATTAGATA 20 20 45.0 50.0 58.1 58.1 15.2 0.7 0.122947 8945 9434 599-624 1.000000 85.7 psbK-psbI_p4 psbK-psbI 4 CTTTTGTTTGGCAAGCTGCT TACGCCCCGGATCATTAGAT 20 20 45.0 50.0 58.1 58.1 15.2 0.7 0.122947 8945 9434 600-625 1.000000 85.7 psbK-psbI_p5 psbK-psbI 5 CTTTTGTTTGGCAAGCTGCT TTACGCCCCGGATCATTAGA 20 20 45.0 50.0 58.1 58.3 15.2 0.7 0.348862 8945 9434 601-626 1.000000 83.9 trnC-GCA-petN_p1 trnC-GCA-petN 1 CCGGATTTGAACTGGGGAAA AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.233476 29149 30344 1013-1366 1.000000 85.2 trnC-GCA-petN_p2 trnC-GCA-petN 2 CCGGATTTGAACTGGGGAAA AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.1 57.6 0.0 0.0 0.432990 29149 30344 1074-1427 1.000000 83.5 trnC-GCA-petN_p3 trnC-GCA-petN 3 AAAAGGATTTGCAGTCCCCC AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.4 58.2 14.6 0.0 0.506839 29149 30344 995-1348 1.000000 83.1 trnC-GCA-petN_p4 trnC-GCA-petN 4 AAAAGGATTTGCAGTCCCCC AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.4 57.6 14.6 0.0 0.706353 29149 30344 1056-1409 1.000000 81.3 trnC-GCA-petN_p5 trnC-GCA-petN 5 TAATTAGGCGACACCCGGAT AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.6 58.2 0.7 0.0 0.735105 29149 30344 1027-1380 1.000000 81.2 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 AGAGATGTCCTGAACCGCTA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 32412 33065 723-758 1.000000 85.2 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 AGATGTCCTGAACCGCTAGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 32412 33065 721-756 1.000000 85.2 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 TTTCGTAGTACCCTACCCCC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.165150 32412 33065 777-812 1.000000 84.8 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 AGAGATGTCCTGAACCGCTA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.209464 32412 33065 702-737 1.000000 84.8 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 AGATGTCCTGAACCGCTAGA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.209464 32412 33065 700-735 1.000000 84.8 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG AGTAGACCGGACCAACCTAC 20 20 55.0 55.0 58.1 58.2 7.6 9.5 0.219381 33138 34547 1339-1579 1.000000 84.9 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 TCAGTGGTAGAGTAACGCCA AGTAGACCGGACCAACCTAC 20 20 50.0 55.0 58.1 58.2 0.0 9.5 0.241535 33138 34547 1342-1582 1.000000 84.7 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GTGGTAGAGTAACGCCATGG ACAAAAACGAAACGGTCCCT 20 20 55.0 45.0 58.1 58.2 7.6 0.0 0.310137 33138 34547 1321-1561 1.000000 84.2 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 GTGGTAGAGTAACGCCATGG GACCGGACCAACCTACAAAA 20 20 55.0 50.0 58.1 57.7 7.6 9.5 0.323334 33138 34547 1335-1575 1.000000 84.0 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 TCAGTGGTAGAGTAACGCCA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.332292 33138 34547 1324-1564 1.000000 84.0 psaA-ycf3_p1 psaA-ycf3 1 GCCCATTCCTCGAAAGAAGT AGCGCAGAATTGGTTGAAGA 20 20 50.0 45.0 57.9 58.1 4.1 11.5 0.219123 43483 44261 884-983 1.000000 83.8 psaA-ycf3_p2 psaA-ycf3 2 GCCCATTCCTCGAAAGAAGT TAGCGCTTACTCCGGGTAAT 20 20 50.0 50.0 57.9 58.3 4.1 18.7 0.419280 43483 44261 912-1011 1.000000 82.0 psaA-ycf3_p3 psaA-ycf3 3 GCCCATTCCTCGAAAGAAGT TGAAGCGCAGAATTGGTTGA 20 20 50.0 45.0 57.9 58.4 4.1 11.5 0.511886 43483 44261 887-986 1.000000 81.4 psaA-ycf3_p4 psaA-ycf3 4 GCCCATTCCTCGAAAGAAGT TTGAAGCGCAGAATTGGTTG 20 20 50.0 45.0 57.9 57.6 4.1 11.5 0.535971 43483 44261 888-987 1.000000 81.2 psaA-ycf3_p5 psaA-ycf3 5 TGTTCTTGAGAAATGGCCCG AGCGCAGAATTGGTTGAAGA 20 20 50.0 45.0 58.5 58.1 0.0 11.5 0.570155 43483 44261 909-1008 1.000000 80.8 rps4-trnT-UGU_p1 rps4-trnT-UGU 1 CCCCCAGACGACGTATTTTT CTCAGAGGTTAGAGCATCGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.236277 48020 48543 596-647 1.000000 84.4 rps4-trnT-UGU_p2 rps4-trnT-UGU 2 CCCCCAGACGACGTATTTTT GATGGTCATCGGTTCGACTC 20 20 50.0 55.0 57.9 58.2 0.0 0.0 0.262088 48020 48543 565-616 1.000000 84.3 rps4-trnT-UGU_p3 rps4-trnT-UGU 3 GAAACGAGGCCCTCTGTAAC CTCAGAGGTTAGAGCATCGC 20 20 55.0 55.0 58.3 57.9 9.5 0.0 0.409520 48020 48543 574-625 1.000000 83.1 rps4-trnT-UGU_p4 rps4-trnT-UGU 4 GAAACGAGGCCCTCTGTAAC GATGGTCATCGGTTCGACTC 20 20 55.0 55.0 58.3 58.2 9.5 0.0 0.435331 48020 48543 543-594 1.000000 83.0 rps4-trnT-UGU_p5 rps4-trnT-UGU 5 TTTTTGAAACGAGGCCCTCT CTCAGAGGTTAGAGCATCGC 20 20 45.0 55.0 57.6 57.9 9.5 0.0 0.491062 48020 48543 579-630 1.000000 82.4 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TGCCCAGAAAATATCATATTCGT GTTCGAGTCCGTATAGCCCT 23 20 34.8 55.0 56.1 58.7 0.0 0.0 5.564602 52634 53129 524-584 1.000000 48.0 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TGCCCAGAAAATATCATATTCGT AGAAGGTCTACGGTTCGAGT 23 20 34.8 50.0 56.1 57.8 0.0 0.0 5.078536 52634 53129 536-596 1.000000 47.9 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TGCCCAGAAAATATCATATTCGT GAAGGTCTACGGTTCGAGTC 23 20 34.8 55.0 56.1 57.5 0.0 0.0 5.422308 52634 53129 535-595 1.000000 47.9 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 ATGCCCAGAAAATATCATATTCGT AGAAGGTCTACGGTTCGAGT 24 20 33.3 50.0 56.6 57.8 0.0 0.0 5.595649 52634 53129 537-597 1.000000 47.9 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGCCCAGAAAATATCATATTCGT AAGGTCTACGGTTCGAGTCC 23 20 34.8 55.0 56.1 58.8 0.0 0.0 5.709077 52634 53129 534-594 1.000000 47.9 rpl36-rps8_p1 rpl36-rps8 1 ACGGTGTCCCTCTTCTTGTA TTGCCCGGGAATTAAGACAG 20 20 50.0 50.0 58.0 57.9 0.0 29.3 0.128153 81410 81924 1589-1612 0.875000 80.6 rpl36-rps8_p2 rpl36-rps8 2 ACGGTGTCCCTCTTCTTGTA GCCCGGGAATTAAGACAGTT 20 20 50.0 50.0 58.0 57.9 0.0 29.3 0.129647 81410 81924 1587-1610 0.875000 80.6 rpl36-rps8_p3 rpl36-rps8 3 ACGGTGTCCCTCTTCTTGTA TTAGGTGGGATGGGGATTGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.010971 81410 81924 1034-1061 0.875000 80.4 rpl36-rps8_p4 rpl36-rps8 4 AGGACCATGAAATTACCCGC TTAGGTGGGATGGGGATTGT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.058384 81410 81924 989-1016 0.875000 80.2 rpl36-rps8_p5 rpl36-rps8 5 TGCAACCGTTATGTGGCATA TTAGGTGGGATGGGGATTGT 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.120944 81410 81924 1217-1244 0.875000 79.0 rpl16_p1 rpl16 1 TTTCTGGCTCCGCTGTTATC AAACCCTTACGGACACCCTA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.052737 82966 84414 2046-2092 1.000000 84.8 rpl16_p2 rpl16 2 TTTCTGGCTCCGCTGTTATC AACCCTTACGGACACCCTAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.052737 82966 84414 2045-2091 1.000000 84.8 rpl16_p3 rpl16 3 CCATTGGTGCGTTTGAGTTC AAACCCTTACGGACACCCTA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.079038 82966 84414 2214-2260 1.000000 84.4 rpl16_p4 rpl16 4 CCATTGGTGCGTTTGAGTTC AACCCTTACGGACACCCTAA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.079038 82966 84414 2213-2259 1.000000 84.4 rpl16_p5 rpl16 5 CTGTCTTAATTCCCGGGCAA AACCCTTACGGACACCCTAA 20 20 50.0 50.0 57.9 58.0 18.5 0.0 0.151345 82966 84414 2316-2362 1.000000 83.7 ndhF-rpl32_p1 ndhF-rpl32 1 GGCGAAGATCTTTTGTTGCC AAAAGGCTTTCAATGCTGCC 20 20 50.0 45.0 58.0 57.8 9.9 13.8 0.191751 114097 115275 1334-1399 1.000000 88.2 ndhF-rpl32_p2 ndhF-rpl32 2 CCAGAATTCCCACCGTAGTG AAAAGGCTTTCAATGCTGCC 20 20 55.0 45.0 58.0 57.8 0.6 13.8 0.198539 114097 115275 1541-1606 1.000000 87.8 ndhF-rpl32_p3 ndhF-rpl32 3 CGCGATTAGTTACAAACGCC AAAAGGCTTTCAATGCTGCC 20 20 50.0 45.0 57.9 57.8 0.0 13.8 0.241823 114097 115275 1772-1837 1.000000 86.8 ndhF-rpl32_p4 ndhF-rpl32 4 ACAAACGCCTTTTGACAAGC AAAAGGCTTTCAATGCTGCC 20 20 45.0 45.0 58.1 57.8 11.5 13.8 0.253120 114097 115275 1761-1824 0.875000 79.6 ndhF-rpl32_p5 ndhF-rpl32 5 CAAACGCCTTTTGACAAGCA AAAAGGCTTTCAATGCTGCC 20 20 45.0 45.0 58.1 57.8 0.0 13.8 0.254445 114097 115275 1760-1823 0.875000 79.6 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GGCAGCATTGAAAGCCTTTT AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.182194 115435 116222 817-964 1.000000 87.1 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GGCAGCATTGAAAGCCTTTT CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.183564 115435 116222 818-965 1.000000 87.1 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GGCAGCATTGAAAGCCTTTT TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 57.8 57.9 0.0 0.0 0.298641 115435 116222 827-974 1.000000 86.2 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GGCAGCATTGAAAGCCTTTT CCTAAGAGCAGCGTGTCTAC 20 20 45.0 55.0 57.8 57.8 0.0 0.0 0.370658 115435 116222 826-973 1.000000 85.6 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GGCAGCATTGAAAGCCTTTT CTAAGAGCAGCGTGTCTACC 20 20 45.0 55.0 57.8 57.8 0.0 0.0 0.370658 115435 116222 825-972 1.000000 85.6 ccsA-ndhD_p1 ccsA-ndhD 1 ACGAAATAACCACGCCAAGT TGACAAAGTCGAAGCCCTTC 20 20 45.0 50.0 58.1 58.1 0.0 0.0 0.234160 117335 117623 998-1010 1.000000 82.8 ccsA-ndhD_p2 ccsA-ndhD 2 ACGAAATAACCACGCCAAGT ATGGTAATGCCCCAAACTCC 20 20 45.0 50.0 58.1 57.8 0.0 0.0 0.272293 117335 117623 1122-1134 1.000000 82.4 ccsA-ndhD_p3 ccsA-ndhD 3 ACGAAATAACCACGCCAAGT GACAAAGTCGAAGCCCTTCT 20 20 45.0 50.0 58.1 57.8 0.0 6.5 0.284454 117335 117623 997-1009 1.000000 82.4 ccsA-ndhD_p4 ccsA-ndhD 4 ACGAAATAACCACGCCAAGT CTTGGTTGATGATGGTCGGT 20 20 45.0 50.0 58.1 57.9 0.0 0.0 0.226974 117335 117623 1632-1644 1.000000 81.8 ccsA-ndhD_p5 ccsA-ndhD 5 ACGAAATAACCACGCCAAGT GCGTATGGATTGGTTCGGAT 20 20 45.0 50.0 58.1 58.1 0.0 0.0 0.234160 117335 117623 1693-1705 0.875000 76.4 ycf1_p1 ycf1 1 CTTCGGACCATTCGGGAAAT TGGAAGACAAAAGTTGCATACA 20 22 50.0 36.4 58.0 56.5 0.0 0.0 3.568430 129680 129799 1005-1050 1.000000 60.3 ycf1_p2 ycf1 2 ACGCCGTTATAGGTGCATTT TGGAAGACAAAAGTTGCATACA 20 22 45.0 36.4 58.0 56.5 0.0 0.0 3.562723 129680 129799 1057-1102 1.000000 60.0 ycf1_p3 ycf1 3 AACGCCGTTATAGGTGCATT TGGAAGACAAAAGTTGCATACA 20 22 45.0 36.4 58.0 56.5 0.0 0.0 3.562723 129680 129799 1058-1103 1.000000 59.9 ycf1_p4 ycf1 4 AGATTTGTGCCAAGGCTTCA TGGAAGACAAAAGTTGCATACA 20 22 45.0 36.4 58.0 56.5 13.0 0.0 3.530394 129680 129799 1154-1199 1.000000 59.7 ycf1_p5 ycf1 5 ATTTGTGCCAAGGCTTCAGA TGGAAGACAAAAGTTGCATACA 20 22 45.0 36.4 58.0 56.5 13.0 0.0 3.530394 129680 129799 1152-1197 1.000000 59.7 rps8_p1 rps8 1 GAACTCAAACGCACCAATGG ACGTCTGCCGGTTGAATTAT 20 20 50.0 45.0 57.9 57.6 0.0 1.9 0.447067 159870 160274 1084-1104 0.250000 50.4 rps8_p2 rps8 2 GAACTCAAACGCACCAATGG ATACGTCTGCCGGTTGAATT 20 20 50.0 45.0 57.9 57.6 0.0 1.9 0.447067 159870 160274 1086-1106 0.250000 50.4 rps8_p3 rps8 3 TTGCCCGGGAATTAAGACAG ACGTCTGCCGGTTGAATTAT 20 20 50.0 45.0 57.9 57.6 29.3 1.9 0.519373 159870 160274 981-1001 0.250000 50.2 rps8_p4 rps8 4 TTGCCCGGGAATTAAGACAG ATACGTCTGCCGGTTGAATT 20 20 50.0 45.0 57.9 57.6 29.3 1.9 0.519373 159870 160274 983-1003 0.250000 50.2 rps8_p5 rps8 5 GCCCGGGAATTAAGACAGTT ACGTCTGCCGGTTGAATTAT 20 20 50.0 45.0 57.9 57.6 29.3 1.9 0.520867 159870 160274 979-999 0.250000 50.2