feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnR-UCU tRNA trnR-UCU trnR-UCU 10 81 1 72 LSC 0.012049 19 44 4 2 no 0.053097 12 0.500000 0.016792 1.000000 43.900000 IGS_001 igs trnR-UCU|atpA trnR-UCU-atpA 82 261 0 180 LSC 0.093939 118 180 27 75 no 0.805310 98 0.928571 0.101442 0.983333 70.900000 atpA gene atpA atpA 262 1785 -1 1524 LSC 0.017637 357 1242 1 24 no 0.858407 102 0.950980 0.022874 1.000000 67.600000 IGS_002 igs atpA|atpF atpA-atpF 1786 1843 0 58 LSC 0.027641 19 45 38 30 no 0.150442 33 0.515152 0.026504 1.000000 54.800000 atpF gene atpF atpF 1844 3150 -1 1307 LSC 0.026152 428 1072 29 16 no 0.902655 107 0.953271 0.030527 0.996174 73.100000 IGS_003 igs atpF|atpH atpF-atpH 3151 3558 0 408 LSC 0.038533 209 343 28 60 no 0.743363 96 0.875000 0.042086 0.921569 69.500000 atpH gene atpH atpH 3559 3804 -1 246 LSC 0.011495 95 114 35 6 no 0.141593 31 0.516129 0.015981 1.000000 45.600000 IGS_004 igs atpH|atpI atpH-atpI 3805 4545 0 741 LSC 0.034516 352 702 185 24 no 0.858407 104 0.932692 0.040772 0.994602 75.700000 atpI gene atpI atpI 4546 5289 -1 744 LSC 0.012715 159 601 23 14 no 0.584071 81 0.814815 0.017199 1.000000 61.200000 IGS_005 igs atpI|rps2 atpI-rps2 5290 5509 0 220 LSC 0.022319 78 217 41 22 no 0.646018 84 0.869048 0.026236 0.977273 59.100000 rps2 gene rps2 rps2 5510 6220 -1 711 LSC 0.012645 182 573 31 17 no 0.628319 85 0.835294 0.017777 1.000000 62.300000 IGS_006 igs rps2|rpoC2 rps2-rpoC2 6221 6444 0 224 LSC 0.043315 118 192 300 9 no 0.725664 94 0.872340 0.042315 1.000000 70.500000 rpoC2 gene rpoC2 rpoC2 6445 10611 -1 4167 LSC 0.020772 1343 2964 4 95 no 0.893805 105 0.961905 0.025623 1.000000 65.000000 IGS_007 igs rpoC2|rpoC1 rpoC2-rpoC1 10612 10764 0 153 LSC 0.025952 57 111 9 8 no 0.327434 56 0.660714 0.031530 1.000000 55.700000 rpoC1 gene rpoC1 rpoC1 10765 13507 -1 2743 LSC 0.017316 852 1848 1 4 no 0.849558 104 0.923077 0.021875 0.999271 64.700000 IGS_008 igs rpoC1|rpoB rpoC1-rpoB 13508 13533 0 26 LSC 0.025771 11 26 175 27 no 0.088496 15 0.666667 0.025771 1.000000 52.500000 rpoB gene rpoB rpoB 13534 16749 -1 3216 LSC 0.015079 930 1917 17 3 no 0.876106 105 0.942857 0.018533 1.000000 63.600000 IGS_009 igs rpoB|trnC-GCA rpoB-trnC-GCA 16750 17901 0 1152 LSC 0.044207 470 585 6 75 yes 0.946903 110 0.972727 0.038791 0.950521 79.400000 trnC-GCA tRNA trnC-GCA trnC-GCA 17902 17972 1 71 LSC 0.001229 2 0 4 4 no 0.000000 3 0.000000 0.001229 1.000000 23.100000 IGS_010 igs trnC-GCA|petN trnC-GCA-petN 17973 18715 0 743 LSC 0.041441 329 687 75 166 yes 0.849558 103 0.932039 0.041837 0.995962 80.200000 petN gene petN petN 18716 18805 1 90 LSC 0.002880 7 0 2 76 no 0.044248 8 0.625000 0.002880 1.000000 30.700000 IGS_011 igs petN|psbM petN-psbM 18806 19774 0 969 LSC 0.036494 409 780 92 15 no 0.831858 99 0.949495 0.034816 1.000000 74.600000 psbM gene psbM psbM 19775 19879 -1 105 LSC 0.012076 13 0 14 61 no 0.079646 19 0.473684 0.012076 1.000000 39.200000 IGS_012 igs psbM|trnD-GUC psbM-trnD-GUC 19880 20784 0 905 LSC 0.043076 364 616 59 29 yes 0.867257 104 0.942308 0.038859 0.992265 79.900000 trnD-GUC tRNA trnD-GUC trnD-GUC 20785 20861 -1 77 LSC 0.005467 8 3 54 46 no 0.053097 10 0.600000 0.005689 0.961039 41.400000 IGS_013 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 20862 21340 0 479 LSC 0.044146 201 440 47 94 yes 0.867257 105 0.933333 0.042149 0.979123 78.100000 trnY-GUA tRNA trnY-GUA trnY-GUA 21341 21424 -1 84 LSC 0.002201 3 84 6 10 no 0.026549 5 0.600000 0.002201 1.000000 31.100000 IGS_014 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 21425 21488 0 64 LSC 0.041642 25 64 90 73 no 0.150442 35 0.485714 0.041642 1.000000 64.300000 trnE-UUC tRNA trnE-UUC trnE-UUC 21489 21561 -1 73 LSC 0.000489 2 73 13 0 no 0.026549 4 0.750000 0.000489 1.000000 28.900000 IGS_015 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 21562 22752 0 1191 LSC 0.042450 534 1024 86 80 yes 0.893805 106 0.952830 0.040595 0.978170 83.600000 trnT-GGU tRNA trnT-GGU trnT-GGU 22753 22824 1 72 LSC 0.002902 5 0 0 8 no 0.017699 6 0.333333 0.002902 1.000000 29.100000 IGS_016 igs trnT-GGU|psbD trnT-GGU-psbD 22825 24371 0 1547 LSC 0.034488 594 1007 72 83 yes 0.946903 110 0.972727 0.032950 0.976729 80.200000 psbD gene psbD psbD 24372 25433 1 1062 LSC 0.006309 97 0 3 18 no 0.495575 73 0.767123 0.006309 1.000000 48.800000 psbC gene psbC psbC 25381 26802 1 1422 LSC 0.008766 175 0 28 46 no 0.637168 88 0.818182 0.008766 1.000000 55.500000 IGS_018 igs psbC|trnS-UGA psbC-trnS-UGA 26803 27034 0 232 LSC 0.042156 90 77 114 105 no 0.522124 73 0.808219 0.042576 1.000000 73.500000 trnS-UGA tRNA trnS-UGA trnS-UGA 27035 27127 -1 93 LSC 0.002386 3 0 9 12 no 0.008850 5 0.200000 0.002386 1.000000 24.700000 IGS_019 igs trnS-UGA|psbZ trnS-UGA-psbZ 27128 27451 0 324 LSC 0.030575 120 92 102 220 no 0.681416 90 0.855556 0.030162 1.000000 71.800000 psbZ gene psbZ psbZ 27452 27640 1 189 LSC 0.004537 20 0 5 31 no 0.123894 20 0.700000 0.004537 1.000000 36.000000 IGS_020 igs psbZ|trnG-GCC psbZ-trnG-GCC 27641 28223 0 583 LSC 0.055615 290 421 194 26 yes 0.884956 106 0.943396 0.052185 0.979417 82.200000 trnG-GCC tRNA trnG-GCC trnG-GCC 28224 28294 1 71 LSC 0.008832 13 0 53 31 no 0.070796 12 0.666667 0.008832 1.000000 38.900000 IGS_021 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 28295 28446 0 152 LSC 0.046078 80 111 44 168 no 0.681416 90 0.855556 0.040026 1.000000 71.300000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 28447 28520 -1 74 LSC 0.001824 2 0 18 94 no 0.008850 3 0.333333 0.001824 1.000000 24.500000 IGS_022 igs trnfM-CAU|rps14 trnfM-CAU-rps14 28521 28698 0 178 LSC 0.014237 46 16 92 96 no 0.318584 47 0.765957 0.014304 1.000000 56.700000 rps14 gene rps14 rps14 28699 29001 -1 303 LSC 0.012602 57 2 19 4 no 0.309735 53 0.660377 0.012604 1.000000 43.900000 IGS_023 igs rps14|psaB rps14-psaB 29002 29118 0 117 LSC 0.016677 25 44 29 111 no 0.176991 31 0.645161 0.016829 1.000000 50.400000 psaB gene psaB psaB 29119 31323 -1 2205 LSC 0.007799 229 0 89 217 no 0.752212 95 0.894737 0.007799 1.000000 60.300000 IGS_024 igs psaB|psaA psaB-psaA 31324 31348 0 25 LSC 0.002819 3 0 155 192 no 0.026549 4 0.750000 0.002819 1.000000 44.600000 psaA gene psaA psaA 31349 33601 -1 2253 LSC 0.007396 242 0 180 91 no 0.690265 93 0.838710 0.007396 1.000000 59.000000 IGS_025 igs psaA|ycf3 psaA-ycf3 33602 34223 0 622 LSC 0.028192 185 221 29 90 no 0.823009 101 0.920792 0.027810 0.996785 73.600000 ycf3 gene ycf3 ycf3 34224 36275 -1 2052 LSC 0.017951 467 211 13 28 no 0.858407 104 0.932692 0.017727 0.999513 67.600000 IGS_026 igs ycf3|trnS-GGA ycf3-trnS-GGA 36276 36929 0 654 LSC 0.030053 243 473 100 86 no 0.752212 96 0.885417 0.029559 0.993884 76.100000 trnS-GGA tRNA trnS-GGA trnS-GGA 36930 37016 1 87 LSC 0.006515 9 0 2 0 no 0.053097 11 0.545455 0.006515 1.000000 35.200000 IGS_027 igs trnS-GGA|rps4 trnS-GGA-rps4 37017 37296 0 280 LSC 0.034067 116 154 0 54 no 0.743363 94 0.893617 0.034349 0.978571 65.600000 rps4 gene rps4 rps4 37297 37902 -1 606 LSC 0.012767 113 0 3 19 no 0.530973 74 0.810811 0.012767 1.000000 53.400000 IGS_028 igs rps4|trnT-UGU rps4-trnT-UGU 37903 38270 0 368 LSC 0.030098 138 98 44 116 no 0.805310 99 0.919192 0.030755 0.980978 69.700000 trnT-UGU tRNA trnT-UGU trnT-UGU 38271 38343 -1 73 LSC 0.001918 4 0 15 43 no 0.008850 5 0.200000 0.001918 1.000000 27.800000 IGS_029 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 38344 39607 0 1264 LSC 0.051336 615 966 88 16 yes 0.911504 108 0.953704 0.048441 0.974684 79.300000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 39608 39642 1 35 LSC 0.007075 1 0 6 103 no 0.008850 3 0.333333 0.007075 1.000000 26.100000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 40181 40230 1 50 LSC 0.010733 4 0 90 14 no 0.008850 6 0.166667 0.010733 1.000000 34.800000 IGS_032 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 40231 40591 0 361 LSC 0.032268 158 197 33 107 no 0.769912 97 0.896907 0.030609 0.986150 69.400000 trnF-GAA tRNA trnF-GAA trnF-GAA 40592 40664 1 73 LSC 0.001429 3 0 30 34 no 0.017699 4 0.500000 0.001429 1.000000 27.100000 IGS_033 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 40665 41430 0 766 LSC 0.034008 321 626 103 30 no 0.858407 104 0.932692 0.032867 0.985640 75.500000 ndhJ gene ndhJ ndhJ 41431 41907 -1 477 LSC 0.009544 76 0 38 42 no 0.442478 68 0.735294 0.009544 1.000000 50.400000 IGS_034 igs ndhJ|ndhK ndhJ-ndhK 41908 42040 0 133 LSC 0.028247 46 31 5 6 no 0.345133 60 0.650000 0.028574 1.000000 56.800000 ndhK gene ndhK ndhK 42041 42724 -1 684 LSC 0.012922 130 5 3 16 no 0.628319 84 0.845238 0.012925 1.000000 56.200000 IGS_035 igs ndhK|ndhC ndhK-ndhC 42725 42776 0 52 LSC 0.017315 17 13 41 69 no 0.132743 29 0.517241 0.017155 1.000000 50.600000 ndhC gene ndhC ndhC 42777 43139 -1 363 LSC 0.010318 54 0 35 2 no 0.362832 57 0.719298 0.010318 1.000000 44.200000 IGS_036 igs ndhC|trnV-UAC ndhC-trnV-UAC 43140 43803 0 664 LSC 0.044065 310 484 69 52 yes 0.796460 101 0.891089 0.041998 0.992470 81.200000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 43804 43838 -1 35 LSC 0.001490 1 0 7 17 no 0.000000 2 0.000000 0.001490 1.000000 23.500000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 44453 44491 -1 39 LSC 0.000454 1 0 18 28 no 0.008850 2 0.500000 0.000454 1.000000 23.700000 IGS_039 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 44492 44666 0 175 LSC 0.036117 63 28 57 86 no 0.486726 76 0.723684 0.036634 1.000000 66.800000 trnM-CAU tRNA trnM-CAU trnM-CAU 44667 44739 1 73 LSC 0.000970 4 0 7 13 no 0.035398 5 0.800000 0.000970 1.000000 27.200000 IGS_040 igs trnM-CAU|atpE trnM-CAU-atpE 44740 44914 0 175 LSC 0.041997 60 65 80 29 no 0.486726 74 0.743243 0.041253 0.965714 66.000000 atpE gene atpE atpE 44915 45316 -1 402 LSC 0.013502 77 0 33 104 no 0.398230 66 0.681818 0.013502 1.000000 49.400000 atpB gene atpB atpB 45313 46809 -1 1497 LSC 0.008989 204 0 25 3 no 0.690265 92 0.847826 0.008989 1.000000 54.700000 IGS_042 igs atpB|rbcL atpB-rbcL 46810 47557 0 748 LSC 0.024202 225 318 23 83 no 0.778761 98 0.897959 0.023782 1.000000 70.500000 rbcL gene rbcL rbcL 47558 48985 1 1428 LSC 0.010390 175 0 36 2 no 0.681416 91 0.846154 0.010390 1.000000 55.100000 IGS_043 igs rbcL|accD rbcL-accD 48986 49693 0 708 LSC 0.041124 300 294 69 17 yes 0.893805 107 0.943925 0.040396 0.988701 79.200000 accD gene accD accD 49694 51097 1 1404 LSC 0.019371 359 222 78 15 no 0.867257 104 0.942308 0.019384 1.000000 69.800000 IGS_044 igs accD|psaI accD-psaI 51098 51507 0 410 LSC 0.036032 159 353 22 14 no 0.796460 98 0.918367 0.034236 0.975610 70.200000 psaI gene psaI psaI 51508 51627 1 120 LSC 0.003300 11 0 71 9 no 0.088496 12 0.833333 0.003300 1.000000 34.000000 IGS_045 igs psaI|ycf4 psaI-ycf4 51628 52066 0 439 LSC 0.033371 169 265 105 32 no 0.858407 103 0.941748 0.033278 0.995444 72.900000 ycf4 gene ycf4 ycf4 52067 52621 1 555 LSC 0.013034 111 4 24 9 no 0.433628 68 0.720588 0.013034 1.000000 52.100000 IGS_046 igs ycf4|cemA ycf4-cemA 52622 53069 0 448 LSC 0.040200 198 358 54 80 no 0.761062 97 0.886598 0.039038 0.997768 75.500000 cemA gene cemA cemA 53070 53759 1 690 LSC 0.018504 174 0 13 18 no 0.690265 93 0.838710 0.018504 1.000000 59.700000 IGS_047 igs cemA|petA cemA-petA 53760 53968 0 209 LSC 0.027966 74 28 161 34 no 0.442478 66 0.757576 0.028143 1.000000 60.800000 petA gene petA petA 53969 54931 1 963 LSC 0.012742 183 0 86 12 no 0.619469 88 0.795455 0.012742 1.000000 55.700000 IGS_048 igs petA|psbJ petA-psbJ 54932 55763 0 832 LSC 0.033587 312 621 60 108 no 0.867257 105 0.933333 0.033003 0.983173 77.800000 psbJ gene psbJ psbJ 55764 55886 -1 123 LSC 0.007364 12 0 4 5 no 0.044248 13 0.384615 0.007364 1.000000 35.400000 IGS_049 igs psbJ|psbL psbJ-psbL 55887 56022 0 136 LSC 0.012034 22 10 14 44 no 0.212389 37 0.648649 0.011865 1.000000 47.700000 psbL gene psbL psbL 56023 56139 -1 117 LSC 0.003604 5 0 111 11 no 0.026549 6 0.500000 0.003604 1.000000 27.000000 IGS_050 igs psbL|psbF psbL-psbF 56140 56161 0 22 LSC 0.036160 9 0 72 33 no 0.035398 10 0.400000 0.036160 1.000000 50.700000 psbF gene psbF psbF 56162 56281 -1 120 LSC 0.006736 10 0 9 33 no 0.053097 13 0.461538 0.006736 1.000000 33.900000 IGS_051 igs psbF|psbE psbF-psbE 56282 56290 0 9 LSC 0.018893 3 0 86 24 no 0.008850 4 0.250000 NA 1.000000 41.700000 psbE gene psbE psbE 56291 56542 -1 252 LSC 0.002829 16 0 95 27 no 0.097345 17 0.647059 0.002829 1.000000 31.800000 IGS_052 igs psbE|petL psbE-petL 56543 57832 0 1290 LSC 0.040393 584 976 227 9 yes 0.946903 110 0.972727 0.038404 0.841085 72.900000 petL gene petL petL 57833 57928 1 96 LSC 0.022740 26 0 18 39 no 0.132743 30 0.500000 0.022740 1.000000 45.300000 IGS_053 igs petL|petG petL-petG 57929 58113 0 185 LSC 0.026918 61 17 27 101 no 0.389381 62 0.709677 0.026758 1.000000 58.900000 petG gene petG petG 58114 58227 1 114 LSC 0.008055 15 0 41 44 no 0.079646 17 0.529412 0.008055 1.000000 39.400000 IGS_054 igs petG|trnW-CCA petG-trnW-CCA 58228 58352 0 125 LSC 0.020982 46 20 12 90 no 0.274336 44 0.704545 0.016347 0.960000 51.200000 trnW-CCA tRNA trnW-CCA trnW-CCA 58353 58426 -1 74 LSC 0.001888 5 0 30 16 no 0.035398 6 0.666667 0.001888 1.000000 29.900000 IGS_055 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 58427 58583 0 157 LSC 0.043992 70 23 104 16 no 0.460177 75 0.693333 0.043992 1.000000 67.000000 trnP-UGG tRNA trnP-UGG trnP-UGG 58584 58657 -1 74 LSC 0.003553 2 0 6 19 no 0.008850 3 0.333333 0.003553 1.000000 24.300000 IGS_056 igs trnP-UGG|psaJ trnP-UGG-psaJ 58658 59057 0 400 LSC 0.040112 150 240 57 59 no 0.778761 99 0.888889 0.037603 0.997500 75.600000 psaJ gene psaJ psaJ 59058 59192 1 135 LSC 0.012309 18 3 3 19 no 0.097345 22 0.500000 0.012321 1.000000 41.600000 IGS_057 igs psaJ|rpl33 psaJ-rpl33 59193 59658 0 466 LSC 0.039525 193 285 15 66 no 0.814159 100 0.920000 0.036569 0.989270 74.100000 rpl33 gene rpl33 rpl33 59659 59859 1 201 LSC 0.011938 45 0 23 9 no 0.309735 48 0.729167 0.011938 1.000000 43.100000 IGS_058 igs rpl33|rps18 rpl33-rps18 59860 60025 0 166 LSC 0.066598 74 57 134 11 no 0.672566 89 0.853933 0.063106 1.000000 72.500000 rps18 gene rps18 rps18 60026 60331 1 306 LSC 0.012784 49 0 38 7 no 0.256637 47 0.617021 0.012784 1.000000 42.500000 IGS_059 igs rps18|rpl20 rps18-rpl20 60332 60607 0 276 LSC 0.042291 124 106 6 24 no 0.690265 89 0.876404 0.042165 1.000000 69.700000 rpl20 gene rpl20 rpl20 60608 60961 -1 354 LSC 0.018268 83 0 31 8 no 0.451327 70 0.728571 0.018268 1.000000 49.700000 IGS_060 igs rpl20|rps12 rpl20-rps12 60962 61752 0 791 LSC 0.029559 291 189 50 41 no 0.831858 102 0.921569 0.026681 0.988622 75.000000 rps12_part1 gene rps12 rps12 61753 61866 -1 114 LSC 0.014272 15 0 38 14 no 0.097345 22 0.500000 0.014272 1.000000 40.500000 IGS_061 igs rps12|clpP rps12-clpP 61867 62058 0 192 LSC 0.034126 64 74 62 129 no 0.530973 75 0.800000 0.033930 1.000000 66.000000 clpP gene clpP clpP 62059 64057 -1 1999 LSC 0.019153 477 148 4 18 no 0.902655 107 0.953271 0.019048 0.998499 68.400000 IGS_062 igs clpP|psbB clpP-psbB 64058 64536 0 479 LSC 0.028380 176 87 156 143 yes 0.778761 98 0.897959 0.028034 0.987474 78.700000 psbB gene psbB psbB 64537 66063 1 1527 LSC 0.009043 216 0 9 5 no 0.690265 94 0.829787 0.009043 1.000000 54.800000 IGS_063 igs psbB|psbT psbB-psbT 66064 66245 0 182 LSC 0.031159 70 21 33 26 no 0.469027 68 0.779412 0.031205 1.000000 62.200000 psbT gene psbT psbT 66246 66353 1 108 LSC 0.009298 16 6 11 10 no 0.141593 22 0.727273 0.009269 1.000000 45.100000 IGS_064 igs psbT|psbN psbT-psbN 66354 66423 0 70 LSC 0.055944 27 21 8 9 no 0.238938 46 0.586957 0.057488 0.928571 62.000000 psbN gene psbN psbN 66424 66555 -1 132 LSC 0.005573 14 0 11 41 no 0.079646 15 0.600000 0.005573 1.000000 36.100000 IGS_065 igs psbN|psbH psbN-psbH 66556 66659 0 104 LSC 0.015596 24 0 122 74 no 0.194690 34 0.647059 0.015596 1.000000 47.500000 psbH gene psbH psbH 66660 66881 1 222 LSC 0.007857 37 0 27 3 no 0.256637 40 0.725000 0.007857 1.000000 39.800000 IGS_066 igs psbH|petB psbH-petB 66882 67008 0 127 LSC 0.031790 45 15 147 23 no 0.637168 87 0.827586 0.032607 0.992126 64.500000 petB gene petB petB 67009 68469 1 1461 LSC 0.022433 382 228 12 0 no 0.867257 105 0.933333 0.020833 0.993155 69.500000 IGS_067 igs petB|petD petB-petD 68470 68662 0 193 LSC 0.029093 62 9 12 46 no 0.389381 68 0.647059 0.028256 1.000000 58.300000 petD gene petD petD 68663 69898 1 1236 LSC 0.023992 303 148 58 3 no 0.805310 102 0.892157 0.021020 0.944984 67.800000 IGS_068 igs petD|rpoA petD-rpoA 69899 70118 0 220 LSC 0.034591 79 57 96 12 no 0.734513 95 0.873684 0.025684 0.977273 66.600000 rpoA gene rpoA rpoA 70119 71114 -1 996 LSC 0.014877 212 0 12 17 no 0.796460 99 0.909091 0.014878 1.000000 60.000000 IGS_069 igs rpoA|rps11 rpoA-rps11 71115 71179 0 65 LSC 0.022722 15 0 125 81 no 0.132743 23 0.652174 0.022722 1.000000 50.000000 rps11 gene rps11 rps11 71180 71596 -1 417 LSC 0.013660 77 0 13 20 no 0.398230 64 0.703125 0.013660 1.000000 48.300000 IGS_070 igs rps11|rpl36 rps11-rpl36 71597 71689 0 93 LSC 0.030601 32 20 22 122 no 0.486726 74 0.743243 0.022497 0.967742 60.500000 rpl36 gene rpl36 rpl36 71690 71803 -1 114 LSC 0.006087 18 0 14 8 no 0.123894 21 0.666667 0.006087 1.000000 36.900000 IGS_071 igs rpl36|rps8 rpl36-rps8 71804 72290 0 487 LSC 0.037294 223 290 128 52 no 0.823009 101 0.920792 0.036442 0.997947 76.800000 rps8 gene rps8 rps8 72291 72695 -1 405 LSC 0.019364 109 0 31 7 no 0.584071 84 0.785714 0.019364 1.000000 53.600000 IGS_072 igs rps8|rpl14 rps8-rpl14 72696 72846 0 151 LSC 0.035014 56 15 27 6 no 0.424779 66 0.727273 0.034635 1.000000 61.600000 rpl14 gene rpl14 rpl14 72847 73215 -1 369 LSC 0.010836 73 0 9 28 no 0.433628 62 0.790323 0.010836 1.000000 46.400000 IGS_073 igs rpl14|rpl16 rpl14-rpl16 73216 73354 0 139 LSC 0.029702 48 47 255 39 no 0.477876 68 0.794118 0.029449 1.000000 62.500000 rpl16 gene rpl16 rpl16 73355 74844 -1 1490 LSC 0.031104 494 250 21 51 no 0.884956 106 0.943396 0.028416 0.995973 75.400000 IGS_074 igs rpl16|rps3 rpl16-rps3 74845 74983 0 139 LSC 0.057602 62 61 22 11 no 0.637168 88 0.818182 0.052390 0.978417 71.100000 rps3 gene rps3 rps3 74984 75640 -1 657 LSC 0.021118 166 0 18 1 no 0.769912 97 0.896907 0.021118 1.000000 61.500000 rpl22 gene rpl22 rpl22 75625 76119 -1 495 LSC 0.028426 161 37 23 3 no 0.778761 98 0.897959 0.028330 1.000000 69.100000 IGS_076 igs rpl22|rps19 rpl22-rps19 76120 76200 0 81 LSC 0.065337 37 24 20 0 no 0.495575 75 0.746667 0.067249 0.975309 68.100000 rps19 gene rps19 rps19 76201 76479 -1 279 LSC 0.021331 71 0 5 42 no 0.601770 80 0.850000 0.021331 1.000000 52.500000 IGS_077 igs rps19|trnG-UCC rps19-trnG-UCC 76480 76887 0 408 IRb 0.038033 113 165 40 300 no 0.699115 92 0.858696 0.038098 0.980392 72.000000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 76888 76936 -1 49 IRb 0.000000 0 0 30 300 no 0.000000 1 0.000000 0.000000 1.000000 21.000000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 77630 77652 -1 23 IRb 0.000000 0 0 25 54 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 IGS_080 igs trnG-UCC|trnS-GCU trnG-UCC-trnS-GCU 77653 78470 0 818 IRb 0.011979 107 194 48 115 no 0.619469 88 0.795455 0.011752 0.998778 64.000000 trnS-GCU tRNA trnS-GCU trnS-GCU 78471 78558 -1 88 IRb 0.000000 0 0 20 27 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_081 igs trnS-GCU|psbI trnS-GCU-psbI 78559 78660 0 102 IRb 0.026017 22 20 108 140 no 0.283186 54 0.592593 0.025678 1.000000 62.400000 psbI gene psbI psbI 78661 78771 -1 111 IRb 0.001808 3 0 6 29 no 0.008850 4 0.250000 0.001808 1.000000 23.600000 IGS_082 igs psbI|psbK psbI-psbK 78772 79173 0 402 IRb 0.008190 39 40 117 276 no 0.592920 83 0.807229 0.006720 0.995025 62.500000 psbK gene psbK psbK 79174 79359 -1 186 IRb 0.000839 4 0 13 90 no 0.026549 6 0.500000 0.000839 1.000000 23.300000 IGS_083 igs psbK|trnQ-UUG psbK-trnQ-UUG 79360 79726 0 367 IRb 0.003786 24 24 199 298 no 0.221239 38 0.657895 0.003806 0.997275 55.200000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 79727 79798 1 72 IRb 0.000724 1 0 124 226 no 0.000000 2 0.000000 0.000724 1.000000 30.100000 IGS_084 igs trnQ-UUG|rps16 trnQ-UUG-rps16 79799 80983 0 1185 IRb 0.005639 127 365 196 181 no 0.663717 88 0.852273 0.005290 0.999156 72.000000 rps16 gene rps16 rps16 80984 82138 1 1155 IRb 0.004620 75 86 300 9 no 0.557522 81 0.777778 0.004545 0.998268 52.500000 IGS_085 igs rps16|trnK-UUU rps16-trnK-UUU 82139 83180 0 1042 IRb 0.012935 146 640 18 92 no 0.769912 97 0.896907 0.011541 0.990403 64.100000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 83181 83217 1 37 IRb 0.000000 0 0 25 55 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 matK gene matK matK 83923 85428 1 1506 IRb 0.004462 86 0 97 61 no 0.548673 79 0.784810 0.004462 1.000000 49.000000 IGS_088 igs matK|trnK-UUU matK-trnK-UUU 85429 85687 0 259 IRb 0.004802 11 11 4 38 no 0.115044 25 0.520000 0.004803 1.000000 33.900000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 85688 85722 1 35 IRb 0.000000 0 0 186 3 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_089 igs trnK-UUU|psbA trnK-UUU-psbA 85723 86002 0 280 IRb 0.007950 22 24 221 300 no 0.230088 37 0.702703 0.007981 1.000000 57.700000 psbA gene psbA psbA 86003 87064 1 1062 IRb 0.000794 19 0 154 47 no 0.115044 21 0.619048 0.000794 1.000000 33.300000 IGS_090 igs psbA|trnH-GUG psbA-trnH-GUG 87065 87432 0 368 IRb 0.027320 51 30 300 119 no 0.327434 47 0.787234 0.027319 1.000000 66.200000 trnH-GUG tRNA trnH-GUG trnH-GUG 87433 87506 1 74 IRb 0.000239 1 0 19 45 no 0.008850 2 0.500000 0.000239 1.000000 22.100000 IGS_091 igs trnH-GUG|rpl2 trnH-GUG-rpl2 87507 87620 0 114 IRb 0.057090 37 61 93 300 no 0.230088 50 0.520000 0.056862 0.859649 66.100000 rpl2 gene rpl2 rpl2 87621 89120 -1 1500 IRb 0.002261 66 29 10 288 no 0.362832 51 0.803922 0.002260 1.000000 41.500000 IGS_092 igs rpl2|rpl23 rpl2-rpl23 89121 89138 0 18 IRb 0.001949 1 0 113 270 no 0.000000 2 0.000000 NA 1.000000 35.000000 rpl23 gene rpl23 rpl23 89139 89420 -1 282 IRb 0.002238 12 5 131 300 no 0.070796 13 0.615385 0.002237 1.000000 38.400000 IGS_093 igs rpl23|trnI-CAU rpl23-trnI-CAU 89421 89589 0 169 IRb 0.001818 7 0 11 300 no 0.044248 8 0.625000 0.001818 1.000000 26.400000 trnI-CAU tRNA trnI-CAU trnI-CAU 89590 89663 -1 74 IRb 0.000000 0 0 180 300 no 0.000000 1 0.000000 0.000000 1.000000 32.200000 IGS_094 igs trnI-CAU|ycf2 trnI-CAU-ycf2 89664 89751 0 88 IRb 0.000402 2 0 254 228 no 0.017699 3 0.666667 0.000402 1.000000 37.100000 ycf2 gene ycf2 ycf2 89752 96612 1 6861 IRb 0.003435 415 358 300 272 no 0.796460 98 0.918367 0.003428 0.997376 63.900000 IGS_095 igs ycf2|trnL-CAA ycf2-trnL-CAA 96613 97574 0 962 IRb 0.004018 69 524 8 300 no 0.424779 66 0.727273 0.003962 1.000000 49.800000 trnL-CAA tRNA trnL-CAA trnL-CAA 97575 97655 -1 81 IRb 0.000219 1 0 239 225 no 0.008850 2 0.500000 0.000219 1.000000 35.600000 IGS_096 igs trnL-CAA|ndhB trnL-CAA-ndhB 97656 98243 0 588 IRb 0.004046 49 110 300 300 no 0.265487 44 0.681818 0.004051 1.000000 63.000000 ndhB gene ndhB ndhB 98244 100462 -1 2219 IRb 0.001749 96 20 261 300 no 0.442478 63 0.793651 0.001748 1.000000 54.100000 IGS_097 igs ndhB|rps7 ndhB-rps7 100463 100746 0 284 IRb 0.002431 17 18 300 300 no 0.115044 19 0.684211 0.002435 1.000000 50.700000 rps7 gene rps7 rps7 100747 101214 -1 468 IRb 0.000788 7 0 300 300 no 0.035398 7 0.571429 0.000788 1.000000 40.100000 IGS_098 igs rps7|rps12 rps7-rps12 101215 101267 0 53 IRb 0.003459 3 0 127 300 no 0.017699 4 0.500000 0.003459 1.000000 37.200000 rps12_part2 gene rps12 rps12 101268 102065 -1 798 IRb 0.001334 27 0 180 110 no 0.150442 26 0.653846 0.001334 1.000000 40.900000 IGS_099 igs rps12|trnV-GAC rps12-trnV-GAC 102066 103757 0 1692 IRb 0.006355 130 742 300 300 no 0.743363 95 0.884211 0.006214 0.991726 71.600000 trnV-GAC tRNA trnV-GAC trnV-GAC 103758 103829 1 72 IRb 0.000000 0 0 156 300 no 0.000000 1 0.000000 0.000000 1.000000 30.400000 IGS_100 igs trnV-GAC|rrn16 trnV-GAC-rrn16 103830 104046 0 217 IRb 0.002240 14 40 228 300 no 0.106195 18 0.666667 0.002240 1.000000 51.000000 rrn16 rRNA rrn16 rrn16 104047 105537 1 1491 IRb 0.000615 15 11 300 143 no 0.035398 14 0.285714 0.000615 1.000000 38.800000 IGS_101 igs rrn16|trnI-GAU rrn16-trnI-GAU 105538 105832 0 295 IRb 0.007273 28 12 300 300 no 0.132743 25 0.600000 0.007212 0.996610 56.300000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 105833 105864 1 32 IRb 0.000000 0 0 151 300 no 0.000000 1 0.000000 0.000000 1.000000 30.100000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 106830 106869 1 40 IRb 0.000000 0 0 166 300 no 0.000000 1 0.000000 0.000000 1.000000 31.200000 IGS_104 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 106870 106933 0 64 IRb 0.001640 3 0 206 300 no 0.008850 4 0.250000 0.001640 1.000000 40.500000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 106934 106971 1 38 IRb 0.000000 0 0 270 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 107766 107800 1 35 IRb 0.000000 0 0 300 15 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 IGS_107 igs trnA-UGC|rrn23 trnA-UGC-rrn23 107801 107960 0 160 IRb 0.005703 9 0 300 223 no 0.035398 11 0.363636 0.005703 1.000000 44.000000 rrn23 rRNA rrn23 rrn23 107961 110772 1 2812 IRb 0.000480 33 0 96 300 no 0.203540 32 0.718750 0.000480 1.000000 35.000000 IGS_108 igs rrn23|rrn4.5 rrn23-rrn4.5 110773 110870 0 98 IRb 0.001964 7 0 300 300 no 0.044248 8 0.625000 0.001964 1.000000 44.400000 rrn4.5 rRNA rrn4.5 rrn4.5 110871 110973 1 103 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_109 igs rrn4.5|rrn5 rrn4.5-rrn5 110974 111232 0 259 IRb 0.003204 19 66 300 165 no 0.115044 22 0.590909 0.003325 1.000000 49.800000 rrn5 rRNA rrn5 rrn5 111233 111353 1 121 IRb 0.000146 1 0 300 44 no 0.008850 2 0.500000 0.000146 1.000000 23.300000 IGS_110 igs rrn5|trnR-ACG rrn5-trnR-ACG 111354 111618 0 265 IRb 0.004076 15 33 300 193 no 0.132743 27 0.555556 0.002240 0.992453 50.400000 trnR-ACG tRNA trnR-ACG trnR-ACG 111619 111692 1 74 IRb 0.000000 0 0 67 119 no 0.000000 1 0.000000 0.000000 1.000000 23.800000 IGS_111 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 111693 112290 0 598 IRb 0.011100 78 124 141 76 no 0.433628 69 0.710145 0.010836 1.000000 62.400000 trnN-GUU tRNA trnN-GUU trnN-GUU 112291 112362 -1 72 IRb 0.001629 1 0 19 4 no 0.000000 2 0.000000 0.001629 1.000000 21.500000 IGS_112 igs trnN-GUU|ycf1 trnN-GUU-ycf1 112363 112697 0 335 IRb 0.004635 23 68 91 8 no 0.150442 30 0.566667 0.004644 1.000000 39.700000 ycf1 gene ycf1 ycf1 112698 114087 1 1390 IRb 0.008506 151 259 0 4 no 0.752212 97 0.876289 0.008438 1.000000 61.600000 IGS_113 igs ycf1|ndhF ycf1-ndhF 114088 115114 0 1027 SSC 0.040069 387 50 6 15 yes 0.884956 106 0.943396 0.039937 1.000000 78.600000 ndhF gene ndhF ndhF 115115 116314 -1 1200 SSC 0.018335 268 2 28 7 no 0.796460 100 0.900000 0.018335 1.000000 61.400000 IGS_114 igs ndhF|rpl32 ndhF-rpl32 116315 117295 0 981 SSC 0.075249 551 778 23 41 yes 0.911504 107 0.962617 0.072673 0.981651 82.300000 rpl32 gene rpl32 rpl32 117296 117454 1 159 SSC 0.019202 41 2 2 9 no 0.327434 55 0.672727 0.019241 1.000000 47.700000 IGS_115 igs rpl32|trnL-UAG rpl32-trnL-UAG 117455 118574 0 1120 SSC 0.058165 591 1016 13 82 yes 0.893805 106 0.952830 0.058798 0.983036 80.300000 trnL-UAG tRNA trnL-UAG trnL-UAG 118575 118654 1 80 SSC 0.003137 3 0 53 2 no 0.008850 4 0.250000 0.003137 1.000000 25.200000 IGS_116 igs trnL-UAG|ccsA trnL-UAG-ccsA 118655 118796 0 142 SSC 0.075364 67 58 133 72 no 0.769912 98 0.887755 0.072562 0.943662 76.600000 ccsA gene ccsA ccsA 118797 119765 1 969 SSC 0.024651 285 19 7 40 no 0.743363 96 0.875000 0.024644 1.000000 65.500000 IGS_117 igs ccsA|ndhD ccsA-ndhD 119766 120030 0 265 SSC 0.060621 124 136 6 13 no 0.840708 103 0.922330 0.062304 0.992453 75.400000 ndhD gene ndhD ndhD 120031 121533 -1 1503 SSC 0.020257 349 5 4 46 no 0.840708 101 0.940594 0.020260 1.000000 63.100000 IGS_118 igs ndhD|psaC ndhD-psaC 121534 121661 0 128 SSC 0.031538 45 20 38 23 no 0.654867 89 0.831461 0.030343 0.976562 64.300000 psaC gene psaC psaC 121662 121907 -1 246 SSC 0.009338 27 0 5 1 no 0.194690 38 0.578947 0.009338 1.000000 39.200000 IGS_119 igs psaC|ndhE psaC-ndhE 121908 122161 0 254 SSC 0.036384 96 50 68 18 no 0.601770 82 0.829268 0.036535 1.000000 66.300000 ndhE gene ndhE ndhE 122162 122464 -1 303 SSC 0.019526 53 0 1 29 no 0.433628 68 0.720588 0.019526 1.000000 48.300000 IGS_120 igs ndhE|ndhG ndhE-ndhG 122465 122718 0 254 SSC 0.042351 116 147 5 144 no 0.672566 88 0.863636 0.042426 1.000000 69.200000 ndhG gene ndhG ndhG 122719 123249 -1 531 SSC 0.013241 96 0 22 22 no 0.539823 81 0.753086 0.013241 1.000000 53.800000 IGS_121 igs ndhG|ndhI ndhG-ndhI 123250 123635 0 386 SSC 0.052443 179 242 88 16 no 0.867257 104 0.942308 0.051254 0.987047 78.100000 ndhI gene ndhI ndhI 123636 124145 -1 510 SSC 0.012619 83 9 5 51 no 0.486726 71 0.774648 0.012581 1.000000 53.000000 IGS_122 igs ndhI|ndhA ndhI-ndhA 124146 124226 0 81 SSC 0.022500 24 1 92 12 no 0.194690 35 0.628571 0.022508 1.000000 47.500000 ndhA gene ndhA ndhA 124227 126497 -1 2271 SSC 0.024932 681 358 23 120 no 0.946903 110 0.972727 0.024506 0.997798 72.300000 IGS_123 igs ndhA|ndhH ndhA-ndhH 126498 126498 0 1 SSC 0.000000 0 0 13 119 no 0.000000 1 0.000000 NA 1.000000 19.700000 ndhH gene ndhH ndhH 126499 127680 -1 1182 SSC 0.013132 204 0 14 56 no 0.761062 98 0.877551 0.013132 1.000000 58.700000 IGS_124 igs ndhH|rps15 ndhH-rps15 127681 127800 0 120 SSC 0.041541 51 17 29 33 no 0.442478 66 0.757576 0.041359 1.000000 66.500000 rps15 gene rps15 rps15 127801 128073 -1 273 SSC 0.020578 66 26 2 23 no 0.486726 73 0.753425 0.019041 0.978022 55.100000 IGS_125 igs rps15|ycf1 rps15-ycf1 128074 128468 0 395 SSC 0.052812 210 177 23 5 no 0.814159 98 0.938776 0.052236 0.992405 76.800000 ycf1 gene ycf1 ycf1 128469 133817 -1 5349 SSC 0.039164 1981 1915 5 0 yes 0.982301 112 0.991071 0.039300 1.000000 73.300000 IGS_126 igs ycf1|trnN-GUU ycf1-trnN-GUU 133818 134152 0 335 IRa 0.004668 23 335 8 91 no 0.159292 31 0.580645 0.004685 1.000000 39.600000 trnN-GUU tRNA trnN-GUU trnN-GUU 134153 134224 1 72 IRa 0.001642 1 72 4 19 no 0.008850 3 0.333333 0.001642 1.000000 27.700000 IGS_127 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 134225 134822 0 598 IRa 0.011084 78 598 76 141 no 0.442478 70 0.714286 0.010823 1.000000 62.300000 trnR-ACG tRNA trnR-ACG trnR-ACG 134823 134896 -1 74 IRa 0.000000 0 74 119 67 no 0.008850 2 0.500000 0.000000 1.000000 29.900000 IGS_128 igs trnR-ACG|rrn5 trnR-ACG-rrn5 134897 135161 0 265 IRa 0.002451 15 265 193 183 no 0.123894 28 0.500000 0.002424 0.992453 48.500000 rrn5 rRNA rrn5 rrn5 135162 135282 -1 121 IRa 0.000148 1 121 197 62 no 0.017699 3 0.666667 0.000148 1.000000 30.800000 IGS_129 igs rrn5|rrn4.5 rrn5-rrn4.5 135283 135541 0 259 IRa 0.004233 19 259 300 300 no 0.115044 23 0.565217 0.004336 1.000000 52.600000 rrn4.5 rRNA rrn4.5 rrn4.5 135542 135644 -1 103 IRa 0.000000 0 103 196 300 no 0.008850 2 0.500000 0.000000 1.000000 39.600000 IGS_130 igs rrn4.5|rrn23 rrn4.5-rrn23 135645 135742 0 98 IRa 0.001981 7 98 299 300 no 0.053097 9 0.666667 0.001981 1.000000 50.500000 rrn23 rRNA rrn23 rrn23 135743 138554 -1 2812 IRa 0.000478 33 2812 300 96 no 0.212389 33 0.727273 0.000478 1.000000 41.100000 IGS_131 igs rrn23|trnA-UGC rrn23-trnA-UGC 138555 138714 0 160 IRa 0.005970 11 160 223 300 no 0.044248 12 0.416667 0.005970 1.000000 51.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 138715 138749 -1 35 IRa 0.000000 0 35 15 300 no 0.008850 2 0.500000 0.000000 1.000000 26.000000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 139544 139581 -1 38 IRa 0.000000 0 38 300 270 no 0.008850 2 0.500000 0.000000 1.000000 39.900000 IGS_134 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 139582 139645 0 64 IRa 0.001654 3 64 300 206 no 0.017699 5 0.400000 0.001654 1.000000 46.700000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 139646 139685 -1 40 IRa 0.000000 0 40 300 166 no 0.008850 2 0.500000 0.000000 1.000000 37.300000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 140651 140682 -1 32 IRa 0.000000 0 32 300 151 no 0.008850 2 0.500000 0.000000 1.000000 36.200000 IGS_137 igs trnI-GAU|rrn16 trnI-GAU-rrn16 140683 140977 0 295 IRa 0.007306 28 295 300 300 no 0.141593 26 0.615385 0.007305 0.996610 57.400000 rrn16 rRNA rrn16 rrn16 140978 142468 -1 1491 IRa 0.000620 15 1491 143 300 no 0.044248 15 0.333333 0.000620 1.000000 44.100000 IGS_138 igs rrn16|trnV-GAC rrn16-trnV-GAC 142469 142685 0 217 IRa 0.002255 14 217 300 228 no 0.115044 19 0.684211 0.002265 1.000000 50.900000 trnV-GAC tRNA trnV-GAC trnV-GAC 142686 142757 -1 72 IRa 0.000000 0 72 300 156 no 0.008850 2 0.500000 0.000000 1.000000 36.600000 IGS_139 igs trnV-GAC|rps12 trnV-GAC-rps12 142758 144449 0 1692 IRa 0.006803 126 1692 300 300 no 0.761062 96 0.895833 0.006434 0.992908 71.600000 rps12_part2 gene rps12 rps12 144450 145247 1 798 IRa 0.001326 27 798 110 180 no 0.159292 27 0.666667 0.001346 1.000000 46.900000 IGS_140 igs rps12|rps7 rps12-rps7 145248 145300 0 53 IRa 0.003517 3 53 300 127 no 0.017699 5 0.400000 0.003517 1.000000 43.000000 rps7 gene rps7 rps7 145301 145768 1 468 IRa 0.000801 7 468 300 300 no 0.035398 8 0.500000 0.000801 1.000000 45.800000 IGS_141 igs rps7|ndhB rps7-ndhB 145769 146052 0 284 IRa 0.002421 17 284 300 300 no 0.115044 20 0.650000 0.002424 1.000000 50.100000 ndhB gene ndhB ndhB 146053 148271 1 2219 IRa 0.001662 91 2219 300 261 no 0.424779 62 0.774194 0.001662 1.000000 58.000000 IGS_142 igs ndhB|trnL-CAA ndhB-trnL-CAA 148272 148859 0 588 IRa 0.004060 49 588 300 300 no 0.265487 45 0.666667 0.004064 1.000000 62.500000 trnL-CAA tRNA trnL-CAA trnL-CAA 148860 148956 1 97 IRa 0.000375 2 97 225 223 no 0.026549 7 0.428571 0.000418 1.000000 40.900000 IGS_143 igs trnL-CAA|ycf2 trnL-CAA-ycf2 148957 149902 0 946 IRa 0.004039 67 946 300 8 no 0.398230 62 0.725806 0.003950 1.000000 48.800000 ycf2 gene ycf2 ycf2 149903 156763 -1 6861 IRa 0.003380 407 6861 272 300 no 0.778761 97 0.907216 0.003369 0.997376 62.800000 IGS_144 igs ycf2|trnI-CAU ycf2-trnI-CAU 156764 156851 0 88 IRa 0.000410 2 88 228 254 no 0.017699 4 0.500000 0.000410 1.000000 42.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 156852 156925 1 74 IRa 0.000000 0 74 300 180 no 0.000000 2 0.000000 0.000000 1.000000 37.900000 IGS_145 igs trnI-CAU|rpl23 trnI-CAU-rpl23 156926 157094 0 169 IRa 0.001849 7 169 300 11 no 0.044248 9 0.555556 0.001849 1.000000 32.100000 rpl23 gene rpl23 rpl23 157095 157376 1 282 IRa 0.002212 12 282 300 131 no 0.070796 14 0.571429 0.002212 1.000000 41.900000 IGS_146 igs rpl23|rpl2 rpl23-rpl2 157377 157394 0 18 IRa 0.001984 1 18 270 113 no 0.000000 3 0.000000 NA 1.000000 40.800000 rpl2 gene rpl2 rpl2 157395 158894 1 1500 IRa 0.002190 66 1500 288 10 no 0.362832 52 0.788462 0.002183 1.000000 44.700000 IGS_147 igs rpl2|trnH-GUG rpl2-trnH-GUG 158895 159008 0 114 IRa 0.070891 38 114 300 93 no 0.292035 49 0.673469 0.065009 0.850877 66.300000 trnH-GUG tRNA trnH-GUG trnH-GUG 159009 159082 -1 74 IRa 0.000243 1 74 40 19 no 0.008850 3 0.333333 0.000243 1.000000 27.800000 IGS_148 igs trnH-GUG|psbA trnH-GUG-psbA 159083 159450 0 368 IRa 0.027230 51 368 114 300 no 0.318584 50 0.720000 0.027256 1.000000 65.100000 psbA gene psbA psbA 159451 160512 -1 1062 IRa 0.000775 18 1062 47 154 no 0.106195 21 0.571429 0.000775 1.000000 38.700000 IGS_149 igs psbA|trnK-UUU psbA-trnK-UUU 160513 160792 0 280 IRa 0.007930 22 280 300 67 no 0.230088 38 0.684211 0.007958 1.000000 47.100000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 160793 160827 -1 35 IRa 0.000000 0 35 3 32 no 0.000000 2 0.000000 0.000000 1.000000 24.700000 matK gene matK matK 161087 162592 -1 1506 IRa 0.004453 86 1506 61 97 no 0.548673 79 0.784810 0.004453 1.000000 54.700000 IGS_152 igs matK|trnK-UUU matK-trnK-UUU 162593 163297 0 705 IRa 0.005396 42 705 10 62 no 0.265487 50 0.600000 0.005400 0.998582 46.200000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 163298 163334 -1 37 IRa 0.000000 0 37 55 25 no 0.000000 2 0.000000 0.000000 1.000000 26.300000 IGS_153 igs trnK-UUU|rps16 trnK-UUU-rps16 163335 164376 0 1042 IRa 0.011840 151 1042 92 18 no 0.752212 96 0.885417 0.010418 0.989443 62.700000 rps16 gene rps16 rps16 164377 165531 -1 1155 IRa 0.005031 72 1155 9 144 no 0.575221 83 0.783133 0.004433 0.998268 52.100000 IGS_154 igs rps16|trnQ-UUG rps16-trnQ-UUG 165532 166716 0 1185 IRa 0.005188 122 1185 181 196 no 0.646018 88 0.829545 0.005105 0.999156 70.900000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 166717 166788 -1 72 IRa 0.000737 1 72 226 124 no 0.000000 3 0.000000 0.000737 1.000000 35.800000 IGS_155 igs trnQ-UUG|psbK trnQ-UUG-psbK 166789 167155 0 367 IRa 0.003760 24 367 298 199 no 0.212389 38 0.631579 0.003774 0.997275 54.500000 psbK gene psbK psbK 167156 167341 1 186 IRa 0.000853 4 186 90 13 no 0.026549 7 0.428571 0.000853 1.000000 29.000000 IGS_156 igs psbK|psbI psbK-psbI 167342 167743 0 402 IRa 0.007858 38 402 276 143 no 0.539823 81 0.753086 0.006958 0.995025 62.400000 psbI gene psbI psbI 167744 167854 1 111 IRa 0.001700 3 111 29 32 no 0.008850 5 0.200000 0.001700 1.000000 30.900000 IGS_157 igs psbI|trnS-GCU psbI-trnS-GCU 167855 167956 0 102 IRa 0.021862 22 102 140 108 no 0.221239 45 0.555556 0.020297 1.000000 58.800000 trnS-GCU tRNA trnS-GCU trnS-GCU 167957 168044 1 88 IRa 0.000000 0 88 29 20 no 0.000000 2 0.000000 0.000000 1.000000 25.900000 IGS_158 igs trnS-GCU|trnG-UCC trnS-GCU-trnG-UCC 168045 168862 0 818 IRa 0.011576 111 818 117 48 no 0.619469 88 0.795455 0.011276 0.998778 63.200000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 168863 168885 1 23 IRa 0.000000 0 23 54 25 no 0.000000 2 0.000000 0.000000 1.000000 26.300000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 169579 169627 1 49 IRa 0.000000 0 49 300 30 no 0.008850 3 0.333333 0.000000 1.000000 26.900000 IGS_161 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 169628 9 0 414 IRa 0.038386 108 414 300 44 no 0.769912 96 0.906250 0.036916 0.975845 73.000000