feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 3 77 -1 75 Genome 0.020754 34 47 12 3 no 0.045455 6 0.500000 0.030231 1.000000 47.600000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 78 391 0 314 Genome 0.048145 173 301 21 186 no 0.696970 55 0.836364 0.055831 0.952229 70.600000 psbA gene psbA psbA 392 1453 -1 1062 Genome 0.017610 484 1002 32 50 no 0.287879 31 0.612903 0.031385 1.000000 59.000000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1454 1759 0 306 Genome 0.041999 162 306 47 30 no 0.590909 47 0.829787 0.040720 1.000000 69.000000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1760 1794 -1 35 Genome 0.026841 20 35 10 35 no 0.030303 5 0.400000 0.026841 1.000000 50.400000 matK gene matK matK 2033 3553 -1 1521 Genome 0.029838 727 788 39 29 no 0.712121 54 0.870370 0.037074 1.000000 72.400000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3554 4268 0 715 Genome 0.033949 323 202 300 167 yes 0.651515 50 0.860000 0.039091 1.000000 83.500000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4269 4305 -1 37 Genome 0.017790 11 22 11 130 no 0.000000 3 0.000000 0.001662 1.000000 45.800000 IGS_006 igs trnK-UUU|rbcL trnK-UUU-rbcL 4306 5071 0 766 Genome 0.050068 398 492 48 0 no 0.833333 60 0.916667 0.052679 0.975196 79.600000 rbcL gene rbcL rbcL 5072 6499 -1 1428 Genome 0.034635 576 355 0 78 no 0.621212 49 0.836735 0.041030 1.000000 70.700000 IGS_007 igs rbcL|atpB rbcL-atpB 6500 7312 0 813 Genome 0.039866 416 260 28 10 no 0.818182 58 0.931034 0.040708 0.987700 77.000000 atpB gene atpB atpB 7313 8791 1 1479 Genome 0.030190 675 331 91 207 no 0.787879 57 0.912281 0.036126 1.000000 78.700000 IGS_008 igs atpB|atpE atpB-atpE 8792 8813 0 22 Genome 0.019072 8 3 125 185 no 0.030303 5 0.400000 0.005637 1.000000 55.900000 atpE gene atpE atpE 8814 9215 1 402 Genome 0.032114 190 55 147 29 no 0.303030 28 0.714286 0.036021 1.000000 61.800000 IGS_009 igs atpE|trnM-CAU atpE-trnM-CAU 9216 9315 0 100 Genome 0.050188 54 8 67 77 no 0.181818 23 0.521739 0.050897 1.000000 68.400000 trnM-CAU tRNA trnM-CAU trnM-CAU 9316 9388 -1 73 Genome 0.024932 31 16 1 4 no 0.060606 5 0.800000 0.031705 1.000000 49.700000 IGS_010 igs trnM-CAU|trnV-UAC trnM-CAU-trnV-UAC 9389 9573 0 185 Genome 0.056326 109 32 74 134 no 0.393939 35 0.742857 0.053716 1.000000 72.400000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 9574 9611 1 38 Genome 0.002441 2 38 1 96 no 0.015152 4 0.250000 0.002441 1.000000 32.100000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 10214 10248 1 35 Genome 0.027293 16 4 17 16 no 0.030303 3 0.666667 0.030814 1.000000 51.400000 IGS_013 igs trnV-UAC|ndhC trnV-UAC-ndhC 10249 10649 0 401 Genome 0.053334 221 104 52 76 no 0.696970 52 0.884615 0.051968 0.997506 78.500000 ndhC gene ndhC ndhC 10650 11012 1 363 Genome 0.024961 126 134 3 161 no 0.181818 18 0.666667 0.035847 1.000000 53.300000 IGS_014 igs ndhC|ndhK ndhC-ndhK 11013 11054 0 42 Genome 0.020701 16 11 15 119 no 0.075758 7 0.714286 0.026634 1.000000 49.100000 ndhK gene ndhK ndhK 11055 11738 1 684 Genome 0.028896 298 121 57 112 no 0.393939 35 0.742857 0.033858 1.000000 68.200000 IGS_015 igs ndhK|ndhJ ndhK-ndhJ 11739 11881 0 143 Genome 0.029887 66 61 15 29 no 0.227273 20 0.750000 0.034089 1.000000 56.000000 ndhJ gene ndhJ ndhJ 11882 12358 1 477 Genome 0.028884 216 89 30 23 no 0.287879 25 0.760000 0.034279 1.000000 61.100000 IGS_016 igs ndhJ|trnF-GAA ndhJ-trnF-GAA 12359 13069 0 711 Genome 0.041183 309 652 300 56 no 0.757576 56 0.892857 0.052106 0.997187 76.600000 trnF-GAA tRNA trnF-GAA trnF-GAA 13070 13142 -1 73 Genome 0.025023 26 26 4 9 no 0.000000 5 0.000000 0.036186 1.000000 48.700000 IGS_017 igs trnF-GAA|trnL-UAA trnF-GAA-trnL-UAA 13143 13248 0 106 Genome 0.036589 36 73 16 127 no 0.242424 26 0.615385 0.047054 1.000000 58.900000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 13249 13298 -1 50 Genome 0.007767 7 34 7 77 no 0.015152 3 0.333333 0.000625 1.000000 41.200000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 13836 13870 -1 35 Genome 0.043918 20 2 127 83 no 0.045455 8 0.375000 0.044050 1.000000 64.100000 IGS_020 igs trnL-UAA|trnT-UGU trnL-UAA-trnT-UGU 13871 14914 0 1044 Genome 0.064536 558 662 16 89 yes 0.924242 63 0.968254 0.064671 0.972222 81.700000 trnT-UGU tRNA trnT-UGU trnT-UGU 14915 14987 1 73 Genome 0.026976 33 3 19 16 no 0.000000 2 0.000000 0.028132 1.000000 49.700000 IGS_021 igs trnT-UGU|rps4 trnT-UGU-rps4 14988 15201 0 214 Genome 0.032425 99 77 92 62 no 0.333333 34 0.647059 0.039598 0.995327 62.400000 rps4 gene rps4 rps4 15202 15807 1 606 Genome 0.033407 292 105 153 29 no 0.393939 36 0.722222 0.038001 1.000000 68.200000 IGS_022 igs rps4|trnS-GGA rps4-trnS-GGA 15808 16032 0 225 Genome 0.050029 122 77 81 0 no 0.454545 43 0.697674 0.049140 0.995556 68.000000 trnS-GGA tRNA trnS-GGA trnS-GGA 16033 16120 -1 88 Genome 0.040273 48 0 6 88 no 0.060606 7 0.571429 0.040273 1.000000 51.000000 IGS_023 igs trnS-GGA|ycf3 trnS-GGA-ycf3 16121 16382 0 262 Genome 0.037243 132 63 32 80 no 0.348485 36 0.638889 0.038763 0.988550 62.300000 ycf3 gene ycf3 ycf3 16383 18338 1 1956 Genome 0.034371 886 350 46 35 no 0.696970 53 0.867925 0.037233 0.996933 73.600000 IGS_024 igs ycf3|psaA ycf3-psaA 18339 18988 0 650 Genome 0.046321 342 169 18 236 no 0.742424 55 0.890909 0.049617 1.000000 79.600000 psaA gene psaA psaA 18989 21262 1 2274 Genome 0.030698 1062 313 17 216 no 0.606061 47 0.851064 0.034503 1.000000 68.500000 IGS_025 igs psaA|psaB psaA-psaB 21263 21287 0 25 Genome 0.028643 12 0 159 191 no 0.000000 2 0.000000 0.028643 1.000000 56.100000 psaB gene psaB psaB 21288 23492 1 2205 Genome 0.027445 915 387 184 7 no 0.681818 53 0.849057 0.032194 1.000000 67.800000 IGS_026 igs psaB|rps14 psaB-rps14 23493 23614 0 122 Genome 0.040682 63 35 300 32 no 0.348485 32 0.718750 0.041445 1.000000 64.400000 rps14 gene rps14 rps14 23615 23917 1 303 Genome 0.041320 156 26 69 109 no 0.303030 30 0.666667 0.043828 1.000000 66.900000 IGS_027 igs rps14|trnfM-CAU rps14-trnfM-CAU 23918 24071 0 154 Genome 0.042135 90 9 51 80 no 0.257576 22 0.772727 0.041965 1.000000 65.000000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 24072 24145 1 74 Genome 0.030501 34 20 44 6 no 0.075758 9 0.555556 0.039670 1.000000 52.800000 IGS_028 igs trnfM-CAU|trnG-GCC trnfM-CAU-trnG-GCC 24146 24273 0 128 Genome 0.058503 78 31 118 86 no 0.409091 34 0.794118 0.058712 1.000000 73.900000 trnG-GCC tRNA trnG-GCC trnG-GCC 24274 24344 -1 71 Genome 0.017571 20 27 39 15 no 0.015152 5 0.200000 0.026369 1.000000 46.500000 IGS_029 igs trnG-GCC|psbZ trnG-GCC-psbZ 24345 24802 0 458 Genome 0.050298 237 257 110 15 no 0.742424 54 0.907407 0.054442 0.995633 76.900000 psbZ gene psbZ psbZ 24803 24991 -1 189 Genome 0.041911 86 23 47 119 no 0.136364 18 0.500000 0.044701 1.000000 62.300000 IGS_030 igs psbZ|trnS-UGA psbZ-trnS-UGA 24992 25328 0 337 Genome 0.039201 160 99 50 97 no 0.515152 41 0.829268 0.041239 0.967359 67.600000 trnS-UGA tRNA trnS-UGA trnS-UGA 25329 25417 1 89 Genome 0.028506 43 19 23 8 no 0.030303 4 0.500000 0.035274 1.000000 51.300000 IGS_031 igs trnS-UGA|psbC trnS-UGA-psbC 25418 25595 0 178 Genome 0.050194 68 107 112 143 no 0.333333 36 0.611111 0.061245 1.000000 74.000000 psbC gene psbC psbC 25596 27017 -1 1422 Genome 0.027011 585 367 94 46 no 0.560606 45 0.822222 0.034611 1.000000 69.600000 psbD gene psbD psbD 26965 28026 -1 1062 Genome 0.025549 412 256 201 196 no 0.333333 31 0.709677 0.032240 1.000000 76.000000 IGS_033 igs psbD|trnT-GGU psbD-trnT-GGU 28027 29092 0 1066 Genome 0.050588 597 711 101 56 yes 0.833333 60 0.916667 0.055255 0.985929 84.600000 trnT-GGU tRNA trnT-GGU trnT-GGU 29093 29164 -1 72 Genome 0.037736 37 8 3 3 no 0.030303 6 0.333333 0.040182 1.000000 55.200000 IGS_034 igs trnT-GGU|trnE-UUC trnT-GGU-trnE-UUC 29165 29622 0 458 Genome 0.058151 251 264 15 186 no 0.757576 55 0.909091 0.057582 0.969432 76.500000 trnE-UUC tRNA trnE-UUC trnE-UUC 29623 29695 1 73 Genome 0.019983 24 29 31 113 no 0.030303 4 0.500000 0.032143 1.000000 49.000000 IGS_035 igs trnE-UUC|trnY-GUA trnE-UUC-trnY-GUA 29696 29760 0 65 Genome 0.034500 35 19 104 48 no 0.136364 12 0.750000 0.039532 1.000000 59.000000 trnY-GUA tRNA trnY-GUA trnY-GUA 29761 29844 1 84 Genome 0.035548 41 14 169 4 no 0.030303 7 0.285714 0.040147 1.000000 54.200000 IGS_036 igs trnY-GUA|trnD-GUC trnY-GUA-trnD-GUC 29845 30249 0 405 Genome 0.063227 211 365 35 20 no 0.787879 58 0.896552 0.070065 0.995062 76.700000 trnD-GUC tRNA trnD-GUC trnD-GUC 30250 30323 1 74 Genome 0.022365 26 28 32 13 no 0.045455 6 0.500000 0.033863 1.000000 49.000000 IGS_037 igs trnD-GUC|psbM trnD-GUC-psbM 30324 30723 0 400 Genome 0.055486 223 217 53 32 no 0.696970 53 0.867925 0.057492 0.997500 76.700000 psbM gene psbM psbM 30724 30828 1 105 Genome 0.035630 56 11 33 11 no 0.090909 11 0.545455 0.037167 1.000000 56.000000 IGS_038 igs psbM|petN psbM-petN 30829 31690 0 862 Genome 0.053599 440 708 5 6 no 0.893939 62 0.951613 0.060249 0.984919 80.500000 petN gene petN petN 31691 31780 -1 90 Genome 0.009888 12 62 7 9 no 0.015152 5 0.200000 0.024368 1.000000 42.100000 IGS_039 igs petN|trnC-GCA petN-trnC-GCA 31781 32736 0 956 Genome 0.053482 455 657 83 80 yes 0.757576 57 0.877193 0.056456 0.987448 83.300000 trnC-GCA tRNA trnC-GCA trnC-GCA 32737 32807 -1 71 Genome 0.029288 32 16 62 9 no 0.075758 8 0.625000 0.035976 1.000000 52.600000 IGS_040 igs trnC-GCA|rpoB trnC-GCA-rpoB 32808 33958 0 1151 Genome 0.053085 580 825 133 89 yes 0.878788 61 0.950820 0.057624 0.989574 87.700000 rpoB gene rpoB rpoB 33959 37171 1 3213 Genome 0.030811 1446 769 88 251 no 0.803030 57 0.929825 0.036946 1.000000 75.600000 IGS_041 igs rpoB|rpoC1 rpoB-rpoC1 37172 37200 0 29 Genome 0.017604 10 11 153 222 no 0.045455 4 0.750000 0.002155 1.000000 57.400000 rpoC1 gene rpoC1 rpoC1 37201 39972 1 2772 Genome 0.029259 1060 868 182 8 no 0.803030 57 0.929825 0.036092 0.999278 69.500000 IGS_042 igs rpoC1|rpoC2 rpoC1-rpoC2 39973 40159 0 187 Genome 0.037080 74 70 63 89 no 0.272727 24 0.750000 0.046354 1.000000 63.700000 rpoC2 gene rpoC2 rpoC2 40160 44302 1 4143 Genome 0.030918 1747 1236 118 8 no 0.848485 60 0.933333 0.037967 0.998552 68.900000 IGS_043 igs rpoC2|rps2 rpoC2-rps2 44303 44526 0 224 Genome 0.071765 146 91 16 65 no 0.833333 60 0.916667 0.071405 0.977679 75.100000 rps2 gene rps2 rps2 44527 45237 1 711 Genome 0.029898 316 190 16 8 no 0.530303 42 0.833333 0.036942 1.000000 67.500000 IGS_044 igs rps2|atpI rps2-atpI 45238 45479 0 242 Genome 0.052359 129 115 30 29 no 0.651515 49 0.877551 0.056303 0.995868 73.400000 atpI gene atpI atpI 45480 46223 1 744 Genome 0.027933 287 190 3 32 no 0.424242 39 0.717949 0.034194 1.000000 64.300000 IGS_045 igs atpI|atpH atpI-atpH 46224 47016 0 793 Genome 0.053275 451 482 15 23 no 0.742424 56 0.875000 0.055380 0.993695 80.100000 atpH gene atpH atpH 47017 47262 1 246 Genome 0.041576 126 39 146 24 no 0.151515 21 0.476190 0.046562 1.000000 60.700000 IGS_046 igs atpH|atpF atpH-atpF 47263 47864 0 602 Genome 0.055955 320 400 27 28 no 0.787879 58 0.896552 0.060589 0.970100 80.500000 atpF gene atpF atpF 47865 49113 1 1249 Genome 0.036799 640 159 61 24 no 0.681818 51 0.882353 0.040152 1.000000 74.800000 IGS_047 igs atpF|atpA atpF-atpA 49114 49188 0 75 Genome 0.042567 42 9 82 9 no 0.212121 19 0.736842 0.045904 1.000000 61.200000 atpA gene atpA atpA 49189 50712 1 1524 Genome 0.036020 709 286 50 42 no 0.742424 55 0.890909 0.041202 1.000000 76.800000 IGS_048 igs atpA|trnR-UCU atpA-trnR-UCU 50713 50809 0 97 Genome 0.075716 57 51 4 93 no 0.363636 36 0.666667 0.078316 1.000000 65.900000 trnR-UCU tRNA trnR-UCU trnR-UCU 50810 50881 -1 72 Genome 0.014116 18 38 2 21 no 0.045455 4 0.750000 0.029381 1.000000 44.400000 IGS_049 igs trnR-UCU|trnG-UCC trnR-UCU-trnG-UCC 50882 51029 0 148 Genome 0.058255 68 86 74 199 no 0.530303 44 0.795455 0.065554 1.000000 74.800000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 51030 51078 -1 49 Genome 0.020123 17 14 10 150 no 0.030303 3 0.666667 0.028172 1.000000 47.600000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 51787 51809 -1 23 Genome 0.033729 13 0 20 21 no 0.000000 2 0.000000 0.033729 1.000000 47.900000 IGS_052 igs trnG-UCC|trnS-GCU trnG-UCC-trnS-GCU 51810 52457 0 648 Genome 0.061164 363 388 43 188 yes 0.787879 58 0.896552 0.059925 0.956790 80.900000 trnS-GCU tRNA trnS-GCU trnS-GCU 52458 52544 1 87 Genome 0.027072 38 13 1 101 no 0.045455 5 0.600000 0.031535 1.000000 50.500000 IGS_053 igs trnS-GCU|psbI trnS-GCU-psbI 52545 52728 0 184 Genome 0.037337 71 141 88 75 no 0.439394 40 0.725000 0.049883 0.989130 66.600000 psbI gene psbI psbI 52729 52839 -1 111 Genome 0.029274 50 0 46 122 no 0.106061 12 0.583333 0.029274 1.000000 49.900000 IGS_054 igs psbI|psbK psbI-psbK 52840 53162 0 323 Genome 0.042092 160 197 35 105 no 0.590909 49 0.795918 0.045062 0.996904 69.900000 psbK gene psbK psbK 53163 53348 -1 186 Genome 0.030564 85 39 24 52 no 0.106061 13 0.538462 0.036734 1.000000 54.800000 IGS_055 igs psbK|trnQ-UUG psbK-trnQ-UUG 53349 53857 0 509 Genome 0.079438 349 342 80 25 no 0.742424 55 0.890909 0.078465 0.962672 76.900000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 53858 53929 1 72 Genome 0.029677 27 33 36 24 no 0.090909 12 0.500000 0.042075 1.000000 53.900000 IGS_056 igs trnQ-UUG|accD trnQ-UUG-accD 53930 55133 0 1204 Genome 0.074929 795 1171 9 24 no 0.833333 59 0.932203 0.081218 0.979236 77.900000 accD gene accD accD 55134 56636 1 1503 Genome 0.085621 965 768 48 1 yes 0.803030 58 0.913793 0.069792 0.878909 75.600000 IGS_057 igs accD|psaI accD-psaI 56637 57138 0 502 Genome 0.080850 349 460 6 63 no 0.787879 58 0.896552 0.080113 0.990040 76.000000 psaI gene psaI psaI 57139 57243 1 105 Genome 0.034460 47 15 66 4 no 0.136364 15 0.600000 0.035708 1.000000 55.500000 IGS_058 igs psaI|ycf4 psaI-ycf4 57244 57635 0 392 Genome 0.069046 253 218 41 4 no 0.606061 49 0.816327 0.066765 0.994898 71.800000 ycf4 gene ycf4 ycf4 57636 58199 1 564 Genome 0.037574 281 89 35 46 no 0.545455 45 0.800000 0.041949 0.998227 72.600000 IGS_059 igs ycf4|cemA ycf4-cemA 58200 58359 0 160 Genome 0.046085 97 126 18 22 no 0.303030 28 0.714286 0.047050 0.968750 63.800000 cemA gene cemA cemA 58360 59049 1 690 Genome 0.032631 298 163 2 6 no 0.469697 40 0.775000 0.038663 1.000000 67.200000 IGS_060 igs cemA|petA cemA-petA 59050 59265 0 216 Genome 0.053858 121 57 1 84 no 0.424242 37 0.756757 0.053149 0.972222 65.900000 petA gene petA petA 59266 60228 1 963 Genome 0.035365 448 182 70 107 no 0.590909 48 0.812500 0.040306 1.000000 75.800000 IGS_061 igs petA|psbJ petA-psbJ 60229 61114 0 886 Genome 0.049912 460 657 84 50 yes 0.818182 59 0.915254 0.054428 0.979684 82.300000 psbJ gene psbJ psbJ 61115 61237 -1 123 Genome 0.019154 29 82 61 76 no 0.151515 14 0.714286 0.038679 1.000000 52.900000 IGS_062 igs psbJ|psbL psbJ-psbL 61238 61371 0 134 Genome 0.034276 63 18 62 54 no 0.212121 20 0.700000 0.036964 1.000000 60.800000 psbL gene psbL psbL 61372 61488 -1 117 Genome 0.025329 44 40 57 300 no 0.015152 5 0.200000 0.035926 1.000000 53.100000 IGS_063 igs psbL|psbF psbL-psbF 61489 61510 0 22 Genome 0.030790 9 3 62 300 no 0.045455 7 0.428571 0.017880 1.000000 56.700000 psbF gene psbF psbF 61511 61630 -1 120 Genome 0.033073 68 5 84 300 no 0.075758 7 0.714286 0.034416 1.000000 59.000000 IGS_064 igs psbF|psbE psbF-psbE 61631 61639 0 9 Genome 0.016628 3 0 204 300 no 0.015152 3 0.333333 NA 1.000000 54.000000 psbE gene psbE psbE 61640 61891 -1 252 Genome 0.031332 130 21 213 56 no 0.106061 10 0.700000 0.034044 1.000000 57.700000 IGS_065 igs psbE|petL psbE-petL 61892 63023 0 1132 Genome 0.059886 650 605 300 60 yes 0.878788 61 0.950820 0.057005 0.995583 85.400000 petL gene petL petL 63024 63119 1 96 Genome 0.026709 36 26 41 11 no 0.075758 8 0.625000 0.033857 1.000000 51.500000 IGS_066 igs petL|petG petL-petG 63120 63288 0 169 Genome 0.051419 90 88 35 20 no 0.409091 36 0.750000 0.050684 1.000000 68.500000 petG gene petG petG 63289 63402 1 114 Genome 0.031244 50 28 91 8 no 0.075758 8 0.625000 0.036388 1.000000 53.400000 IGS_067 igs petG|trnW-CCA petG-trnW-CCA 63403 63565 0 163 Genome 0.051613 80 79 54 88 no 0.439394 41 0.707317 0.058787 0.932515 69.500000 trnW-CCA tRNA trnW-CCA trnW-CCA 63566 63639 -1 74 Genome 0.029112 39 12 37 14 no 0.045455 4 0.750000 0.033230 1.000000 52.400000 IGS_068 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 63640 63812 0 173 Genome 0.058412 110 29 111 82 no 0.469697 42 0.738095 0.058505 1.000000 74.700000 trnP-UGG tRNA trnP-UGG trnP-UGG 63813 63886 -1 74 Genome 0.033447 40 0 51 8 no 0.106061 8 0.875000 0.033447 1.000000 48.900000 IGS_069 igs trnP-UGG|psaJ trnP-UGG-psaJ 63887 64444 0 558 Genome 0.059617 322 411 125 86 yes 0.863636 61 0.934426 0.065716 0.985663 85.900000 psaJ gene psaJ psaJ 64445 64573 1 129 Genome 0.039435 66 17 63 11 no 0.136364 16 0.562500 0.040460 1.000000 58.600000 IGS_070 igs psaJ|rpl33 psaJ-rpl33 64574 65060 0 487 Genome 0.053634 271 215 0 62 no 0.696970 51 0.901961 0.058771 1.000000 76.400000 rpl33 gene rpl33 rpl33 65061 65261 1 201 Genome 0.030711 74 96 16 1 no 0.272727 30 0.600000 0.045259 1.000000 56.000000 IGS_071 igs rpl33|rps18 rpl33-rps18 65262 65535 0 274 Genome 0.082690 163 169 25 109 no 0.651515 52 0.826923 0.073623 0.937956 70.900000 rps18 gene rps18 rps18 65536 65868 1 333 Genome 0.040784 194 125 5 27 no 0.424242 34 0.823529 0.042096 1.000000 64.400000 IGS_072 igs rps18|rpl20 rps18-rpl20 65869 66133 0 265 Genome 0.046626 131 67 50 6 no 0.590909 49 0.795918 0.049749 1.000000 69.700000 rpl20 gene rpl20 rpl20 66134 66493 -1 360 Genome 0.048099 198 125 14 107 no 0.681818 52 0.865385 0.054052 1.000000 73.900000 IGS_073 igs rpl20|rps12 rpl20-rps12 66494 67143 0 650 Genome 0.039773 330 126 9 23 no 0.590909 48 0.812500 0.042997 1.000000 73.200000 rps12_part1 gene rps12 rps12 67144 67257 -1 114 Genome 0.022831 26 84 71 1 no 0.136364 18 0.500000 0.041179 1.000000 49.700000 IGS_074 igs rps12|clpP rps12-clpP 67258 67422 0 165 Genome 0.068213 113 61 36 1 no 0.515152 43 0.790698 0.071212 0.945455 67.500000 clpP gene clpP clpP 67423 68637 -1 1215 Genome 0.066048 726 771 8 4 no 0.848485 60 0.933333 0.079235 0.984362 80.200000 IGS_075 igs clpP|psbB clpP-psbB 68638 69154 0 517 Genome 0.061238 327 266 5 86 no 0.681818 52 0.865385 0.066567 1.000000 76.600000 psbB gene psbB psbB 69155 70681 1 1527 Genome 0.030948 704 161 77 28 no 0.590909 48 0.812500 0.033903 1.000000 70.700000 IGS_076 igs psbB|psbT psbB-psbT 70682 70870 0 189 Genome 0.049367 107 39 13 101 no 0.303030 32 0.625000 0.052262 1.000000 66.200000 psbT gene psbT psbT 70871 70978 1 108 Genome 0.031054 51 9 88 3 no 0.060606 7 0.571429 0.033491 1.000000 52.800000 IGS_077 igs psbT|psbN psbT-psbN 70979 71043 0 65 Genome 0.050138 33 29 6 75 no 0.106061 14 0.500000 0.061772 1.000000 61.800000 psbN gene psbN psbN 71044 71175 -1 132 Genome 0.022727 43 48 2 52 no 0.060606 7 0.571429 0.033223 1.000000 48.700000 IGS_078 igs psbN|psbH psbN-psbH 71176 71287 0 112 Genome 0.035981 49 40 56 211 no 0.196970 17 0.764706 0.045805 1.000000 61.300000 psbH gene psbH psbH 71288 71509 1 222 Genome 0.027214 97 44 26 3 no 0.060606 10 0.400000 0.033082 1.000000 50.900000 IGS_079 igs psbH|petB psbH-petB 71510 71621 0 112 Genome 0.021579 37 55 10 22 no 0.151515 20 0.500000 0.033127 1.000000 50.300000 petB gene petB petB 71622 73072 1 1451 Genome 0.028909 577 629 67 17 no 0.803030 58 0.913793 0.038382 0.999311 72.700000 IGS_080 igs petB|petD petB-petD 73073 73275 0 203 Genome 0.044782 105 15 267 105 no 0.348485 33 0.696970 0.045896 1.000000 72.000000 petD gene petD petD 73276 74475 1 1200 Genome 0.035816 555 247 21 34 no 0.575758 47 0.808511 0.039490 0.991667 71.700000 IGS_081 igs petD|rpoA petD-rpoA 74476 74693 0 218 Genome 0.046116 120 146 16 18 no 0.469697 40 0.775000 0.049499 1.000000 66.500000 rpoA gene rpoA rpoA 74694 75695 -1 1002 Genome 0.028134 411 298 36 158 no 0.636364 49 0.857143 0.036230 1.000000 70.800000 IGS_082 igs rpoA|rps11 rpoA-rps11 75696 75764 0 69 Genome 0.021616 27 26 179 89 no 0.121212 11 0.727273 0.031017 1.000000 55.700000 rps11 gene rps11 rps11 75765 76181 -1 417 Genome 0.035543 206 95 248 62 no 0.530303 40 0.875000 0.042346 1.000000 70.300000 IGS_083 igs rps11|rpl36 rps11-rpl36 76182 76505 0 324 Genome 0.053860 182 146 206 30 no 0.560606 46 0.804348 0.052929 0.996914 72.400000 rpl36 gene rpl36 rpl36 76506 76619 -1 114 Genome 0.034041 48 29 29 4 no 0.106061 12 0.583333 0.041309 1.000000 54.900000 IGS_084 igs rpl36|rps8 rpl36-rps8 76620 77008 0 389 Genome 0.047517 169 273 62 42 no 0.575758 48 0.791667 0.061169 0.987147 73.200000 rps8 gene rps8 rps8 77009 77413 -1 405 Genome 0.029623 153 147 20 2 no 0.393939 35 0.742857 0.038334 1.000000 60.200000 IGS_085 igs rps8|rpl14 rps8-rpl14 77414 77829 0 416 Genome 0.069659 251 305 55 162 no 0.787879 57 0.912281 0.069388 0.975962 79.000000 rpl14 gene rpl14 rpl14 77830 78198 -1 369 Genome 0.040204 207 9 32 23 no 0.348485 33 0.696970 0.040878 1.000000 62.100000 IGS_086 igs rpl14|rpl16 rpl14-rpl16 78199 78319 0 121 Genome 0.044682 69 21 164 206 no 0.272727 31 0.580645 0.046175 1.000000 74.700000 rpl16 gene rpl16 rpl16 78320 79696 -1 1377 Genome 0.046470 732 340 49 9 no 0.848485 60 0.933333 0.048495 1.000000 80.900000 IGS_087 igs rpl16|rps3 rpl16-rps3 79697 79849 0 153 Genome 0.058881 81 42 12 36 no 0.212121 24 0.583333 0.062879 0.973856 63.800000 rps3 gene rps3 rps3 79850 80506 -1 657 Genome 0.032257 309 124 0 38 no 0.530303 43 0.813953 0.037467 1.000000 68.000000 IGS_088 igs rps3|rps19 rps3-rps19 80507 80655 0 149 Genome 0.045819 86 23 81 29 no 0.257576 28 0.607143 0.046442 1.000000 64.900000 rps19 gene rps19 rps19 80656 80934 -1 279 Genome 0.036320 140 35 9 23 no 0.287879 26 0.730769 0.039563 1.000000 59.800000 IGS_089 igs rps19|rpl2 rps19-rpl2 80935 81136 0 202 Genome 0.070520 109 126 49 6 no 0.439394 39 0.743590 0.051674 0.900990 63.600000 rpl2 gene rpl2 rpl2 81137 82671 -1 1535 Genome 0.039616 733 435 61 21 no 0.772727 56 0.910714 0.046135 1.000000 77.200000 IGS_090 igs rpl2|rpl23 rpl2-rpl23 82672 82691 0 20 Genome 0.026713 9 0 9 1 no 0.045455 6 0.500000 0.026713 1.000000 44.200000 rpl23 gene rpl23 rpl23 82692 82979 -1 288 Genome 0.026660 109 231 29 10 no 0.393939 33 0.787879 0.042036 0.979167 56.300000 IGS_091 igs rpl23|trnI-CAU rpl23-trnI-CAU 82980 83354 0 375 Genome 0.083584 215 259 15 88 no 0.848485 59 0.949153 0.080984 0.938667 75.000000 trnI-CAU tRNA trnI-CAU trnI-CAU 83355 83428 -1 74 Genome 0.020217 27 30 11 14 no 0.030303 3 0.666667 0.031719 1.000000 47.600000 IGS_092 igs trnI-CAU|ycf2 trnI-CAU-ycf2 83429 83533 0 105 Genome 0.081960 54 70 85 4 no 0.575758 42 0.904762 0.076302 0.914286 67.200000 ycf2 gene ycf2 ycf2 83534 89302 1 5769 Genome 0.048501 2937 2337 4 2 no 0.863636 61 0.934426 0.055673 0.999133 75.200000 IGS_093 igs ycf2|trnL-CAA ycf2-trnL-CAA 89303 89893 0 591 Genome 0.050188 308 507 33 29 no 0.727273 55 0.872727 0.054167 0.984772 79.800000 trnL-CAA tRNA trnL-CAA trnL-CAA 89894 89974 -1 81 Genome 0.027403 35 18 26 2 no 0.060606 6 0.666667 0.034064 1.000000 50.900000 IGS_094 igs trnL-CAA|ndhB trnL-CAA-ndhB 89975 90532 0 558 Genome 0.056410 314 237 51 246 no 0.696970 54 0.851852 0.056927 0.976703 80.700000 ndhB gene ndhB ndhB 90533 92760 -1 2228 Genome 0.031091 923 659 14 37 no 0.757576 57 0.877193 0.038793 1.000000 71.200000 IGS_095 igs ndhB|rps7 ndhB-rps7 92761 92999 0 239 Genome 0.058154 133 159 7 219 no 0.333333 34 0.647059 0.070682 0.983264 65.000000 rps7 gene rps7 rps7 93000 93467 -1 468 Genome 0.034943 208 102 15 4 no 0.500000 43 0.767442 0.040633 1.000000 66.200000 IGS_096 igs rps7|rps12 rps7-rps12 93468 93517 0 50 Genome 0.040894 24 15 96 27 no 0.090909 12 0.500000 0.046243 1.000000 59.200000 rps12_part2 gene rps12 rps12 93518 93775 -1 258 Genome 0.027571 83 97 45 95 no 0.090909 19 0.315789 0.037632 1.000000 54.600000 IGS_097 igs rps12|trnV-GAC rps12-trnV-GAC 93776 95158 0 1383 Genome 0.049895 682 1086 2 4 no 0.878788 61 0.950820 0.057570 0.999277 80.200000 trnV-GAC tRNA trnV-GAC trnV-GAC 95159 95230 1 72 Genome 0.039635 43 2 0 5 no 0.121212 12 0.666667 0.039407 1.000000 54.800000 IGS_098 igs trnV-GAC|rrn16 trnV-GAC-rrn16 95231 95467 0 237 Genome 0.060885 124 82 67 81 no 0.454545 39 0.769231 0.068027 1.000000 73.200000 rrn16 rRNA rrn16 rrn16 95468 96965 1 1498 Genome 0.025511 584 521 29 31 no 0.424242 38 0.736842 0.036505 1.000000 65.000000 IGS_099 igs rrn16|trnI-GAU rrn16-trnI-GAU 96966 97272 0 307 Genome 0.066002 188 173 91 160 no 0.530303 43 0.813953 0.072953 0.996743 76.100000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 97273 97309 1 37 Genome 0.013721 9 21 6 123 no 0.030303 3 0.666667 0.000000 1.000000 44.200000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 98116 98150 1 35 Genome 0.025574 15 0 103 19 no 0.000000 2 0.000000 0.025574 1.000000 44.200000 IGS_102 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 98151 98224 0 74 Genome 0.044862 46 29 138 300 no 0.166667 20 0.550000 0.047727 0.932432 68.500000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 98225 98262 1 38 Genome 0.016562 11 18 54 300 no 0.030303 4 0.500000 0.026318 1.000000 49.200000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 99059 99093 1 35 Genome 0.023869 14 4 11 95 no 0.000000 2 0.000000 0.026949 1.000000 49.000000 IGS_105 igs trnA-UGC|rrn23 trnA-UGC-rrn23 99094 99257 0 164 Genome 0.038919 89 27 46 147 no 0.424242 34 0.823529 0.038501 1.000000 66.000000 rrn23 rRNA rrn23 rrn23 99258 102046 1 2789 Genome 0.025301 1108 782 5 43 no 0.530303 45 0.777778 0.033803 1.000000 62.500000 IGS_106 igs rrn23|rrn4.5 rrn23-rrn4.5 102047 102144 0 98 Genome 0.025863 29 44 300 142 no 0.060606 11 0.363636 0.038046 1.000000 60.500000 rrn4.5 rRNA rrn4.5 rrn4.5 102145 102248 1 104 Genome 0.025722 43 20 36 38 no 0.060606 8 0.500000 0.031103 1.000000 52.700000 IGS_107 igs rrn4.5|rrn5 rrn4.5-rrn5 102249 102469 0 221 Genome 0.041845 106 96 140 36 no 0.469697 40 0.775000 0.051039 0.990950 67.000000 rrn5 rRNA rrn5 rrn5 102470 102590 1 121 Genome 0.036387 60 22 50 14 no 0.166667 17 0.647059 0.042219 1.000000 57.900000 IGS_108 igs rrn5|trnR-ACG rrn5-trnR-ACG 102591 102830 0 240 Genome 0.070203 143 230 29 97 no 0.621212 50 0.820000 0.070326 0.987500 71.600000 trnR-ACG tRNA trnR-ACG trnR-ACG 102831 102904 1 74 Genome 0.034241 43 6 5 23 no 0.060606 6 0.666667 0.036569 1.000000 54.400000 IGS_109 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 102905 103391 0 487 Genome 0.081071 294 313 79 76 yes 0.878788 62 0.935484 0.087486 0.987680 84.900000 trnN-GUU tRNA trnN-GUU trnN-GUU 103392 103463 -1 72 Genome 0.033942 41 0 3 4 no 0.030303 4 0.500000 0.033942 1.000000 47.300000 IGS_110 igs trnN-GUU|ycf1 trnN-GUU-ycf1 103464 104079 0 616 Genome 0.115751 407 468 75 6 yes 0.803030 59 0.898305 0.085255 0.788961 72.900000 ycf1 gene ycf1 ycf1 104080 109275 1 5196 Genome 0.071188 3031 1429 1 6 yes 0.893939 62 0.951613 0.074381 0.989992 76.100000 IGS_111 igs ycf1|rps15 ycf1-rps15 109276 109670 0 395 Genome 0.048666 219 253 57 40 no 0.787879 57 0.912281 0.050708 0.992405 78.200000 rps15 gene rps15 rps15 109671 109943 1 273 Genome 0.026809 101 96 29 30 no 0.196970 23 0.565217 0.035792 1.000000 55.100000 IGS_112 igs rps15|ndhH rps15-ndhH 109944 110041 0 98 Genome 0.027273 39 32 59 122 no 0.136364 13 0.692308 0.036209 1.000000 56.400000 ndhH gene ndhH ndhH 110042 111223 1 1182 Genome 0.027185 471 254 67 9 no 0.575758 46 0.826087 0.032925 1.000000 67.300000 IGS_113 igs ndhH|ndhA ndhH-ndhA 111224 111224 0 1 Genome 0.000000 0 0 39 8 no 0.000000 1 0.000000 NA 1.000000 19.400000 ndhA gene ndhA ndhA 111225 113538 1 2314 Genome 0.034548 977 501 40 300 no 0.863636 61 0.934426 0.038685 0.997407 76.500000 IGS_114 igs ndhA|ndhI ndhA-ndhI 113539 113605 0 67 Genome 0.025224 27 4 32 260 no 0.060606 6 0.666667 0.026616 1.000000 52.300000 ndhI gene ndhI ndhI 113606 114094 1 489 Genome 0.024351 197 55 99 19 no 0.196970 20 0.650000 0.026955 1.000000 57.400000 IGS_115 igs ndhI|ndhG ndhI-ndhG 114095 114572 0 478 Genome 0.059857 249 281 228 38 no 0.803030 57 0.929825 0.058760 0.970711 78.800000 ndhG gene ndhG ndhG 114573 115103 1 531 Genome 0.026969 238 103 63 0 no 0.348485 30 0.766667 0.032574 1.000000 60.800000 IGS_116 igs ndhG|ndhE ndhG-ndhE 115104 115274 0 171 Genome 0.033299 75 37 291 126 no 0.378788 33 0.757576 0.036241 1.000000 68.900000 ndhE gene ndhE ndhE 115275 115580 1 306 Genome 0.027322 119 82 21 48 no 0.212121 21 0.666667 0.033157 1.000000 55.200000 IGS_117 igs ndhE|psaC ndhE-psaC 115581 115876 0 296 Genome 0.041609 146 59 18 170 no 0.454545 40 0.750000 0.043241 1.000000 65.900000 psaC gene psaC psaC 115877 116122 1 246 Genome 0.028478 102 52 139 72 no 0.090909 14 0.428571 0.034630 1.000000 57.200000 IGS_118 igs psaC|ndhD psaC-ndhD 116123 116250 0 128 Genome 0.047172 69 31 39 79 no 0.196970 21 0.619048 0.041311 0.968750 64.000000 ndhD gene ndhD ndhD 116251 117744 1 1494 Genome 0.028396 679 260 47 22 no 0.712121 52 0.903846 0.033169 1.000000 71.400000 IGS_119 igs ndhD|ccsA ndhD-ccsA 117745 118024 0 280 Genome 0.054251 163 81 77 15 no 0.424242 40 0.700000 0.052508 0.982143 68.000000 ccsA gene ccsA ccsA 118025 118990 -1 966 Genome 0.039861 463 125 28 49 no 0.575758 47 0.808511 0.042676 1.000000 74.400000 IGS_120 igs ccsA|trnL-UAG ccsA-trnL-UAG 118991 119113 0 123 Genome 0.042499 69 42 56 126 no 0.333333 31 0.709677 0.044283 1.000000 66.500000 trnL-UAG tRNA trnL-UAG trnL-UAG 119114 119193 -1 80 Genome 0.018339 28 28 15 46 no 0.045455 4 0.750000 0.027681 1.000000 47.400000 IGS_121 igs trnL-UAG|rpl32 trnL-UAG-rpl32 119194 119888 0 695 Genome 0.049211 381 660 95 27 no 0.818182 59 0.915254 0.063190 0.994245 79.700000 rpl32 gene rpl32 rpl32 119889 120041 -1 153 Genome 0.037978 88 153 10 8 no 0.212121 27 0.518519 0.037978 1.000000 58.700000 IGS_122 igs rpl32|ndhF rpl32-ndhF 120042 120785 0 744 Genome 0.058953 505 744 17 81 yes 0.878788 60 0.966667 0.056379 0.990591 81.600000 ndhF gene ndhF ndhF 120786 123020 1 2235 Genome 0.020669 1082 2235 30 14 no 0.787879 57 0.912281 0.020809 0.999105 66.800000 IGS_123 igs ndhF|trnH-GUG ndhF-trnH-GUG 123021 2 0 64 Genome 0.046723 33 64 33 53 no 0.363636 31 0.774194 0.044501 0.781250 58.800000