primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnN-GUU-ndhF_p1 trnN-GUU-ndhF 1 CCTGGCCCAAATCAGCATAT AAAGGTCGTAACTGGGGGTA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.033932 113908 114996 1817-1817 0.500000 59.7 trnN-GUU-ndhF_p2 trnN-GUU-ndhF 2 ACCTGGGGCTTTTTACAAGG AAAGGTCGTAACTGGGGGTA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.038243 113908 114996 1585-1585 0.500000 59.7 trnN-GUU-ndhF_p3 trnN-GUU-ndhF 3 CGGGAGAATTGATGACTGCA AAAGGTCGTAACTGGGGGTA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.056981 113908 114996 1663-1663 0.500000 59.5 trnN-GUU-ndhF_p4 trnN-GUU-ndhF 4 AACGGTAAAAACGAGCCCTT AAAGGTCGTAACTGGGGGTA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.057080 113908 114996 1447-1447 0.500000 59.5 trnN-GUU-ndhF_p5 trnN-GUU-ndhF 5 ACGGTAAAAACGAGCCCTTT AAAGGTCGTAACTGGGGGTA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.057080 113908 114996 1446-1446 0.500000 59.5 ndhF_p1 ndhF 1 TGACTTCATTTTTCACTTTTT ATTAGCGGATACTGGGTCCA 21 20 23.8 50.0 50.3 57.9 0.0 0.0 8.832690 114997 117234 2736-2736 0.500000 20.0 ndhF_p2 ndhF 2 TGACTTCATTTTTCACTTTTT TTAGCGGATACTGGGTCCAT 21 20 23.8 50.0 50.3 57.9 0.0 0.0 8.832690 114997 117234 2735-2735 0.500000 20.0 ndhF_p3 ndhF 3 TTGACTTCATTTTTCACTTTT ATTAGCGGATACTGGGTCCA 21 20 23.8 50.0 50.3 57.9 0.0 0.0 8.832690 114997 117234 2737-2737 0.500000 20.0 ndhF_p4 ndhF 4 TTGACTTCATTTTTCACTTTT TTAGCGGATACTGGGTCCAT 21 20 23.8 50.0 50.3 57.9 0.0 0.0 8.832690 114997 117234 2736-2736 0.500000 20.0 ndhF_p5 ndhF 5 TTTGACTTCATTTTTCACTTT TTAGCGGATACTGGGTCCAT 21 20 23.8 50.0 50.3 57.9 0.0 0.0 8.832690 114997 117234 2737-2737 0.500000 20.0 ndhF-rpl32_p1 ndhF-rpl32 1 CTGCAATTGGTCGTGTGAAC TACTCGTTTGGTCGCACAAA 20 20 50.0 45.0 58.0 58.1 7.7 1.0 0.099278 117235 118474 1912-1912 0.500000 59.2 ndhF-rpl32_p2 ndhF-rpl32 2 CTGCAATTGGTCGTGTGAAC TTACTCGTTTGGTCGCACAA 20 20 50.0 45.0 58.0 58.1 7.7 0.0 0.099278 117235 118474 1913-1913 0.500000 59.2 ndhF-rpl32_p3 ndhF-rpl32 3 AATAGGGAGGCACACAGAGT TACTCGTTTGGTCGCACAAA 20 20 50.0 45.0 58.0 58.1 0.0 1.0 0.104434 117235 118474 2096-2096 0.500000 59.2 ndhF-rpl32_p4 ndhF-rpl32 4 AATAGGGAGGCACACAGAGT TTACTCGTTTGGTCGCACAA 20 20 50.0 45.0 58.0 58.1 0.0 0.0 0.104434 117235 118474 2097-2097 0.500000 59.2 ndhF-rpl32_p5 ndhF-rpl32 5 AGGAAAAGCCCACATACGAC TACTCGTTTGGTCGCACAAA 20 20 50.0 45.0 57.9 58.1 0.0 1.0 0.172147 117235 118474 1527-1527 0.500000 58.6 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 TTGTGCGACCAAACGAGTAA AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.070552 118634 119354 770-770 0.500000 59.4 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 TTTGTGCGACCAAACGAGTA AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.070552 118634 119354 771-771 0.500000 59.4 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 TTGTGCGACCAAACGAGTAA CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.071923 118634 119354 771-771 0.500000 59.4 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 TTTGTGCGACCAAACGAGTA CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.071923 118634 119354 772-772 0.500000 59.4 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 TTGTGCGACCAAACGAGTAA GCACTTGGTGTGGTTATTGC 20 20 45.0 50.0 58.1 57.9 0.0 0.0 0.127295 118634 119354 1224-1224 0.500000 59.0 ccsA_p1 ccsA 1 GTGAAATCGGTAGACACGCT TTGCATTGCCAGGAATGAGT 20 20 50.0 45.0 58.0 58.1 0.0 15.1 0.080343 119515 120486 1619-1619 0.500000 59.4 ccsA_p2 ccsA 2 TGAAATCGGTAGACACGCTG TTGCATTGCCAGGAATGAGT 20 20 50.0 45.0 58.0 58.1 0.0 15.1 0.081713 119515 120486 1618-1618 0.500000 59.3 ccsA_p3 ccsA 3 GTGAAATCGGTAGACACGCT CATTGCCAGGAATGAGTGGT 20 20 50.0 50.0 58.0 58.2 0.0 6.0 0.164462 119515 120486 1616-1616 0.500000 58.7 ccsA_p4 ccsA 4 TGAAATCGGTAGACACGCTG CATTGCCAGGAATGAGTGGT 20 20 50.0 50.0 58.0 58.2 0.0 6.0 0.165833 119515 120486 1615-1615 0.500000 58.7 ccsA_p5 ccsA 5 GTGAAATCGGTAGACACGCT CTTCTCTTGCATTGCCAGGA 20 20 50.0 50.0 58.0 58.2 0.0 9.6 0.177551 119515 120486 1625-1625 0.500000 58.6 ndhD_p1 ndhD 1 TCTCTCTGGAGCAGTATGGG GAACCGAAGATTGCGTAGGT 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.085140 120636 122135 2146-2146 0.500000 59.3 ndhD_p2 ndhD 2 TCTCTCTGGAGCAGTATGGG TATGGCATGAGACAACTCGC 20 20 55.0 50.0 57.9 58.1 0.0 11.0 0.139195 120636 122135 2071-2071 0.500000 58.9 ndhD_p3 ndhD 3 AATGAGGCATGGGGATCCTA GAACCGAAGATTGCGTAGGT 20 20 50.0 50.0 57.9 58.0 12.6 0.0 0.144505 120636 122135 2124-2124 0.500000 58.8 ndhD_p4 ndhD 4 TAATGAGGCATGGGGATCCT GAACCGAAGATTGCGTAGGT 20 20 50.0 50.0 57.9 58.0 12.6 0.0 0.144505 120636 122135 2125-2125 0.500000 58.8 ndhD_p5 ndhD 5 TGAGGCATGGGGATCCTATT GAACCGAAGATTGCGTAGGT 20 20 50.0 50.0 57.9 58.0 12.6 0.0 0.144505 120636 122135 2122-2122 0.500000 58.8 psaC_p1 psaC 1 AACGGGTCGTCCAATTGAAA AACCACTGATTCGTCTGGTG 20 20 45.0 50.0 58.0 57.8 7.1 0.0 0.199741 122267 122512 662-662 0.500000 58.4 psaC_p2 psaC 2 ACGGGTCGTCCAATTGAAAA AACCACTGATTCGTCTGGTG 20 20 45.0 50.0 58.0 57.8 7.1 0.0 0.199741 122267 122512 661-661 0.500000 58.4 psaC_p3 psaC 3 AACGGGTCGTCCAATTGAAA CCTTGGCCCTTTTCTCATGA 20 20 45.0 50.0 58.0 57.8 7.1 0.0 0.250561 122267 122512 729-729 0.500000 58.0 psaC_p4 psaC 4 ACGGGTCGTCCAATTGAAAA CCTTGGCCCTTTTCTCATGA 20 20 45.0 50.0 58.0 57.8 7.1 0.0 0.250561 122267 122512 728-728 0.500000 58.0 psaC_p5 psaC 5 ACGGGTCGTCCAATTGAAAA AATCCCTTGGCCCTTTTCTC 20 20 45.0 50.0 58.0 57.8 7.1 0.0 0.267992 122267 122512 732-732 0.500000 57.9 psaC-ndhE_p1 psaC-ndhE 1 ACCTACGCAATCTTCGGTTC GTCGAAGCATGGTTAGAGCA 20 20 50.0 50.0 58.0 58.0 0.0 18.9 0.016116 122513 124078 1952-1952 0.500000 59.9 psaC-ndhE_p2 psaC-ndhE 2 ACCTACGCAATCTTCGGTTC TCGAAGCATGGTTAGAGCAC 20 20 50.0 50.0 58.0 58.0 0.0 15.3 0.016116 122513 124078 1951-1951 0.500000 59.9 psaC-ndhE_p3 psaC-ndhE 3 ACCTACGCAATCTTCGGTTC CGAAGCATGGTTAGAGCACT 20 20 50.0 50.0 58.0 58.0 0.0 10.7 0.021706 122513 124078 1950-1950 0.500000 59.8 psaC-ndhE_p4 psaC-ndhE 4 ACGGGTCGTCCAATTGAAAA GTCGAAGCATGGTTAGAGCA 20 20 45.0 50.0 58.0 58.0 7.1 18.9 0.040053 122513 124078 2357-2357 0.500000 59.7 psaC-ndhE_p5 psaC-ndhE 5 ACGGGTCGTCCAATTGAAAA TCGAAGCATGGTTAGAGCAC 20 20 45.0 50.0 58.0 58.0 7.1 15.3 0.040053 122513 124078 2356-2356 0.500000 59.7 ndhE-ndhG_p1 ndhE-ndhG 1 GTGCTCTAACCATGCTTCGA GGTCACTTCGCTGGTTTGTA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.136447 124385 124770 715-715 0.500000 58.9 ndhE-ndhG_p2 ndhE-ndhG 2 TGCTCTAACCATGCTTCGAC GGTCACTTCGCTGGTTTGTA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.136447 124385 124770 714-714 0.500000 58.9 ndhE-ndhG_p3 ndhE-ndhG 3 AGTGCTCTAACCATGCTTCG GGTCACTTCGCTGGTTTGTA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.142038 124385 124770 716-716 0.500000 58.9 ndhE-ndhG_p4 ndhE-ndhG 4 CGCGTCGATTTTCTGTTACG GGTCACTTCGCTGGTTTGTA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.166513 124385 124770 899-899 0.500000 58.7 ndhE-ndhG_p5 ndhE-ndhG 5 TGCTCTAACCATGCTTCGAC TATTTTGTAGCTGCCGCACA 20 20 50.0 45.0 58.0 58.2 0.0 2.0 0.195352 124385 124770 842-842 0.500000 58.4 ndhG-ndhI_p1 ndhG-ndhI 1 TACAAACCAGCGAAGTGACC AACAAACAGTACGAGCTGCA 20 20 50.0 45.0 58.1 58.1 0.0 1.0 0.178198 125302 126006 1524-1524 0.500000 58.6 ndhG-ndhI_p2 ndhG-ndhI 2 TACAAACCAGCGAAGTGACC ACAAACAGTACGAGCTGCAA 20 20 50.0 45.0 58.1 58.1 0.0 1.0 0.178198 125302 126006 1523-1523 0.500000 58.6 ndhG-ndhI_p3 ndhG-ndhI 3 TGTGCGGCAGCTACAAAATA AACAAACAGTACGAGCTGCA 20 20 45.0 45.0 58.2 58.1 10.9 1.0 0.237103 125302 126006 1396-1396 0.500000 58.1 ndhG-ndhI_p4 ndhG-ndhI 4 TGTGCGGCAGCTACAAAATA ACAAACAGTACGAGCTGCAA 20 20 45.0 45.0 58.2 58.1 10.9 1.0 0.237103 125302 126006 1395-1395 0.500000 58.1 ndhG-ndhI_p5 ndhG-ndhI 5 CACGGTCCAAAGAGGGAAAT ACAAACAGTACGAGCTGCAA 20 20 50.0 45.0 57.8 58.1 0.0 1.0 0.252268 125302 126006 1495-1495 0.500000 58.0 ndhI_p1 ndhI 1 TCTTGTATATGCTACGTCCCT ACCAGAAGCAGAGGAGGAAT 21 20 42.9 50.0 55.7 58.0 0.0 0.0 3.350906 126007 126549 1650-1650 0.500000 33.2 ndhI_p2 ndhI 2 TCTTGTATATGCTACGTCCCT TTGGGGGTGGAATTTATGGC 21 20 42.9 50.0 55.7 58.1 0.0 0.0 3.442118 126007 126549 1740-1740 0.500000 32.5 ndhI_p3 ndhI 3 TCTTGTATATGCTACGTCCCT TGGTTTTTGGGGGTGGAATT 21 20 42.9 45.0 55.7 57.8 0.0 0.0 3.513225 126007 126549 1746-1746 0.500000 31.9 ndhI_p4 ndhI 4 TCTTGTATATGCTACGTCCCT GGGTGGAATTTATGGCGTCA 21 20 42.9 50.0 55.7 58.2 0.0 0.0 3.557209 126007 126549 1736-1736 0.500000 31.5 ndhI_p5 ndhI 5 TTCTTGTATATGCTACGTCCCT ACCAGAAGCAGAGGAGGAAT 22 20 40.9 50.0 56.4 58.0 0.0 0.0 3.592664 126007 126549 1651-1651 0.500000 31.3 ndhI-ndhA_p1 ndhI-ndhA 1 TGCAGCTCGTACTGTTTGTT ACCAGAAGCAGAGGAGGAAT 20 20 45.0 50.0 58.1 58.0 8.8 0.0 0.087911 126550 126642 544-544 0.500000 59.3 ndhI-ndhA_p2 ndhI-ndhA 2 TTGCAGCTCGTACTGTTTGT ACCAGAAGCAGAGGAGGAAT 20 20 45.0 50.0 58.1 58.0 8.8 0.0 0.087911 126550 126642 545-545 0.500000 59.3 ndhI-ndhA_p3 ndhI-ndhA 3 TGCAGCTCGTACTGTTTGTT TTGGGGGTGGAATTTATGGC 20 20 45.0 50.0 58.1 58.1 8.8 0.0 0.179123 126550 126642 634-634 0.500000 58.6 ndhI-ndhA_p4 ndhI-ndhA 4 TTGCAGCTCGTACTGTTTGT TTGGGGGTGGAATTTATGGC 20 20 45.0 50.0 58.1 58.1 8.8 0.0 0.179123 126550 126642 635-635 0.500000 58.6 ndhI-ndhA_p5 ndhI-ndhA 5 TGCAGCTCGTACTGTTTGTT TGGTTTTTGGGGGTGGAATT 20 20 45.0 45.0 58.1 57.8 8.8 0.0 0.250229 126550 126642 640-640 0.500000 58.0 ndhA_p1 ndhA 1 TGCAGCTCGTACTGTTTGTT CAATGTTACGAGCTTCCGGA 20 20 45.0 50.0 58.1 58.0 8.8 0.0 0.056478 126643 128825 2852-2852 0.500000 59.5 ndhA_p2 ndhA 2 TTGCAGCTCGTACTGTTTGT CAATGTTACGAGCTTCCGGA 20 20 45.0 50.0 58.1 58.0 8.8 0.0 0.056478 126643 128825 2853-2853 0.500000 59.5 ndhA_p3 ndhA 3 TGCAGCTCGTACTGTTTGTT GAGGGAGTGGGCATTATTGG 20 20 45.0 55.0 58.1 58.0 8.8 0.0 0.065013 126643 128825 2907-2907 0.500000 59.5 ndhA_p4 ndhA 4 TGCAGCTCGTACTGTTTGTT GGGGCTTATCAGGACCAATG 20 20 45.0 55.0 58.1 58.0 8.8 0.0 0.065013 126643 128825 2867-2867 0.500000 59.5 ndhA_p5 ndhA 5 TTGCAGCTCGTACTGTTTGT GGGGCTTATCAGGACCAATG 20 20 45.0 55.0 58.1 58.0 8.8 0.0 0.065013 126643 128825 2868-2868 0.500000 59.5 ndhH_p1 ndhH 1 TATGACCGCTATTGTTGGCC TATTCGGGAGCCAAAAACCC 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.196155 128827 130008 1633-1633 0.500000 58.4 ndhH_p2 ndhH 2 TCCCTAATGGACCGGCATAT TATTCGGGAGCCAAAAACCC 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.196811 128827 130008 1526-1526 0.500000 58.4 ndhH_p3 ndhH 3 ATTCAGGTCCAATGCGTTGT TATTCGGGAGCCAAAAACCC 20 20 45.0 50.0 58.1 58.2 17.2 0.0 0.248249 128827 130008 1508-1508 0.500000 58.0 ndhH_p4 ndhH 4 AGGTCCAATGCGTTGTTGTA TATTCGGGAGCCAAAAACCC 20 20 45.0 50.0 57.7 58.2 17.2 0.0 0.421953 128827 130008 1504-1504 0.500000 56.6 ndhH_p5 ndhH 5 CCGGCATATTCAGGTCCAAT TATTCGGGAGCCAAAAACCC 20 20 50.0 50.0 57.7 58.2 0.0 0.0 0.434680 128827 130008 1515-1515 0.500000 56.5 ndhH-rps15_p1 ndhH-rps15 1 TCCGGAAGCTCGTAACATTG AGTGCGTGAGTGAGACATTC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.076271 130009 130112 1465-1465 0.500000 59.4 ndhH-rps15_p2 ndhH-rps15 2 CATTGGTCCTGATAAGCCCC AGTGCGTGAGTGAGACATTC 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.084806 130009 130112 1450-1450 0.500000 59.3 ndhH-rps15_p3 ndhH-rps15 3 CCAATAATGCCCACTCCCTC AGTGCGTGAGTGAGACATTC 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.084806 130009 130112 1410-1410 0.500000 59.3 ndhH-rps15_p4 ndhH-rps15 4 TCCGGAAGCTCGTAACATTG GCGTGAGTGAGACATTCGAT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.089949 130009 130112 1462-1462 0.500000 59.3 ndhH-rps15_p5 ndhH-rps15 5 TGCTTCCTCTCCCCCAATAA AGTGCGTGAGTGAGACATTC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.091879 130009 130112 1423-1423 0.500000 59.3 rps15_p1 rps15 1 CCAATAATGCCCACTCCCTC AGTGCGTGAGTGAGACATTC 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.084806 130113 130391 1410-1410 0.500000 59.3 rps15_p2 rps15 2 TATTGCTTCCTCTCCCCCAA AGTGCGTGAGTGAGACATTC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.091879 130113 130391 1426-1426 0.500000 59.3 rps15_p3 rps15 3 TGCTTCCTCTCCCCCAATAA AGTGCGTGAGTGAGACATTC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.091879 130113 130391 1423-1423 0.500000 59.3 rps15_p4 rps15 4 TTATTGCTTCCTCTCCCCCA AGTGCGTGAGTGAGACATTC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.091879 130113 130391 1427-1427 0.500000 59.3 rps15_p5 rps15 5 TTGCTTCCTCTCCCCCAATA AGTGCGTGAGTGAGACATTC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.091879 130113 130391 1424-1424 0.500000 59.3 rps15-ycf1_p1 rps15-ycf1 1 ATCAGTCGAAGAACACCGTG CTAGACGTCGCAGAGAGTTG 20 20 50.0 55.0 57.9 57.8 0.0 10.5 0.232734 130392 131393 1782-1782 0.500000 58.1 rps15-ycf1_p2 rps15-ycf1 2 TTCCCAATTGTTCTGGTGCA CTAGACGTCGCAGAGAGTTG 20 20 45.0 55.0 57.9 57.8 4.4 10.5 0.245911 130392 131393 1967-1967 0.500000 58.0 rps15-ycf1_p3 rps15-ycf1 3 ATCAGTCGAAGAACACCGTG ACTAGACGTCGCAGAGAGTT 20 20 50.0 50.0 57.9 58.2 0.0 22.1 0.255034 130392 131393 1783-1783 0.500000 58.0 rps15-ycf1_p4 rps15-ycf1 4 ATCAGTCGAAGAACACCGTG TGAACCGGTTCGTCTCTCTA 20 20 50.0 50.0 57.9 57.8 0.0 35.4 0.255586 130392 131393 2009-2009 0.500000 58.0 rps15-ycf1_p5 rps15-ycf1 5 ATCAGTCGAAGAACACCGTG TAGACGTCGCAGAGAGTTGA 20 20 50.0 50.0 57.9 58.2 0.0 10.5 0.261392 130392 131393 1781-1781 0.500000 57.9 ycf1_p1 ycf1 1 TCTTTACCCATCCAACCCCT ACACGACCGAAAAGCTATCC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.074802 135146 135265 1042-1042 0.500000 59.4 ycf1_p2 ycf1 2 AAGTGGCGAATGCACATTTG ACACGACCGAAAAGCTATCC 20 20 45.0 50.0 57.9 58.0 6.3 0.0 0.074807 135146 135265 953-953 0.500000 59.4 ycf1_p3 ycf1 3 CAAATCCTCGTACCACTCGG ACACGACCGAAAAGCTATCC 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.083400 135146 135265 1301-1301 0.500000 59.3 ycf1_p4 ycf1 4 TCTTTACCCATCCAACCCCT TGCAGAGGGGTCCATAGAAA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.103417 135146 135265 756-756 0.500000 59.2 ycf1_p5 ycf1 5 AAGTGGCGAATGCACATTTG TGCAGAGGGGTCCATAGAAA 20 20 45.0 50.0 57.9 58.0 6.3 0.0 0.103423 135146 135265 667-667 0.500000 59.2