feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnA-GUG_part1 tRNA trnA-GUG trnA-GUG 1 42 -1 42 LSC 0.000000 0 0 60 47 no 0.000000 1 0.000000 NA 1.000000 22.300000 IGS_001 igs trnA-GUG|psbA trnA-GUG-psbA 43 250 0 208 LSC 0.052885 11 0 102 300 no 1.000000 2 1.000000 NA 1.000000 74.300000 psbA gene psbA psbA 251 1312 -1 1062 LSC 0.000942 1 0 40 136 no 1.000000 2 1.000000 NA 1.000000 47.300000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1313 1558 0 246 LSC 0.004082 1 1 300 190 no 1.000000 2 1.000000 NA 0.995935 54.500000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1559 1594 -1 36 LSC 0.000000 0 0 109 154 no 0.000000 1 0.000000 NA 1.000000 26.900000 matK gene matK matK 1835 3373 -1 1539 LSC 0.001949 3 0 32 300 no 1.000000 2 1.000000 NA 1.000000 47.200000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3374 4126 0 753 LSC 0.000000 0 0 281 128 no 0.000000 1 0.000000 NA 1.000000 34.600000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4127 4164 -1 38 LSC 0.000000 0 0 300 90 no 0.000000 1 0.000000 NA 1.000000 25.500000 IGS_006 igs trnK-UUU|rps16 trnK-UUU-rps16 4165 4943 0 779 LSC 0.005135 4 0 300 108 no 1.000000 2 1.000000 NA 1.000000 54.800000 rps16 gene rps16 rps16 4944 6243 -1 1300 LSC 0.005393 7 2 266 300 no 1.000000 2 1.000000 NA 0.998462 62.000000 IGS_007 igs rps16|trnQ-UUG rps16-trnQ-UUG 6244 7562 0 1319 LSC 0.003035 4 1 62 117 no 1.000000 2 1.000000 NA 0.999242 50.200000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 7563 7634 -1 72 LSC 0.000000 0 0 182 45 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_008 igs trnQ-UUG|psbK trnQ-UUG-psbK 7635 8026 0 392 LSC 0.002558 1 1 254 300 no 1.000000 2 1.000000 NA 0.997449 56.100000 psbK gene psbK psbK 8027 8215 1 189 LSC 0.000000 0 0 300 285 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_009 igs psbK|psbI psbK-psbI 8216 8702 0 487 LSC 0.002053 1 0 300 126 no 1.000000 2 1.000000 NA 1.000000 52.000000 psbI gene psbI psbI 8703 8813 1 111 LSC 0.000000 0 0 201 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 IGS_010 igs psbI|trnS-GCU psbI-trnS-GCU 8814 8962 0 149 LSC 0.013514 2 1 300 146 no 1.000000 2 1.000000 NA 0.993289 56.900000 trnS-GCU tRNA trnS-GCU trnS-GCU 8963 9050 -1 88 LSC 0.000000 0 0 18 58 no 0.000000 1 0.000000 NA 1.000000 20.100000 IGS_011 igs trnS-GCU|trnS-CGA trnS-GCU-trnS-CGA 9051 10357 0 1307 LSC 0.006126 8 1 106 300 no 1.000000 2 1.000000 NA 0.999235 55.300000 trnS-CGA_part1 tRNA trnS-CGA trnS-CGA 10358 10388 1 31 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnS-CGA_part2 tRNA trnS-CGA trnS-CGA 11092 11151 1 60 LSC 0.000000 0 0 212 55 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_014 igs trnS-CGA|trnR-UCU trnS-CGA-trnR-UCU 11152 11296 0 145 LSC 0.006897 1 0 272 140 no 1.000000 2 1.000000 NA 1.000000 52.000000 trnR-UCU tRNA trnR-UCU trnR-UCU 11297 11368 1 72 LSC 0.000000 0 0 89 68 no 0.000000 1 0.000000 NA 1.000000 23.800000 IGS_015 igs trnR-UCU|atpA trnR-UCU-atpA 11369 11505 0 137 LSC 0.007299 1 0 161 171 no 1.000000 2 1.000000 NA 1.000000 53.800000 atpA gene atpA atpA 11506 13029 -1 1524 LSC 0.000656 1 0 68 234 no 1.000000 2 1.000000 NA 1.000000 49.200000 IGS_016 igs atpA|atpF atpA-atpF 13030 13105 0 76 LSC 0.000000 0 0 300 158 no 0.000000 1 0.000000 NA 1.000000 30.600000 atpF gene atpF atpF 13106 14461 -1 1356 LSC 0.002952 4 1 300 300 no 1.000000 2 1.000000 NA 0.999263 60.500000 IGS_017 igs atpF|atpH atpF-atpH 14462 14984 0 523 LSC 0.000000 0 6 42 300 no 1.000000 2 1.000000 NA 0.988528 46.400000 atpH gene atpH atpH 14985 15230 -1 246 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_018 igs atpH|atpI atpH-atpI 15231 15948 0 718 LSC 0.014104 10 9 300 300 no 1.000000 2 1.000000 NA 0.987465 68.100000 atpI gene atpI atpI 15949 16692 -1 744 LSC 0.002688 2 0 170 300 no 1.000000 2 1.000000 NA 1.000000 58.000000 IGS_019 igs atpI|rps2 atpI-rps2 16693 16939 0 247 LSC 0.000000 0 1 132 263 no 1.000000 2 1.000000 NA 0.995951 47.800000 rps2 gene rps2 rps2 16940 17650 -1 711 LSC 0.004219 3 0 300 293 no 1.000000 2 1.000000 NA 1.000000 61.200000 IGS_020 igs rps2|rpoC2 rps2-rpoC2 17651 17867 0 217 LSC 0.000000 0 0 98 76 no 0.000000 1 0.000000 NA 1.000000 24.400000 rpoC2 gene rpoC2 rpoC2 17868 22013 -1 4146 LSC 0.003136 13 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.600000 IGS_021 igs rpoC2|rpoC1 rpoC2-rpoC1 22014 22161 0 148 LSC 0.000000 0 0 300 271 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpoC1 gene rpoC1 rpoC1 22162 24986 -1 2825 LSC 0.001771 5 1 300 300 no 1.000000 2 1.000000 NA 0.999646 57.000000 IGS_022 igs rpoC1|rpoB rpoC1-rpoB 24987 24991 0 5 LSC 0.000000 0 0 257 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpoB gene rpoB rpoB 24992 28207 -1 3216 LSC 0.001866 6 0 262 300 no 1.000000 2 1.000000 NA 1.000000 56.400000 IGS_023 igs rpoB|trnC-GCA rpoB-trnC-GCA 28208 29352 0 1145 LSC 0.001747 2 0 300 282 no 1.000000 2 1.000000 NA 1.000000 59.800000 trnC-GCA tRNA trnC-GCA trnC-GCA 29353 29423 1 71 LSC 0.000000 0 0 63 211 no 0.000000 1 0.000000 NA 1.000000 23.500000 IGS_024 igs trnC-GCA|petN trnC-GCA-petN 29424 30034 0 611 LSC 0.004910 3 0 134 139 no 1.000000 2 1.000000 NA 1.000000 56.600000 petN gene petN petN 30035 30124 1 90 LSC 0.000000 0 0 192 49 no 0.000000 1 0.000000 NA 1.000000 22.400000 IGS_025 igs petN|psbM petN-psbM 30125 31329 0 1205 LSC 0.003342 4 8 282 300 no 1.000000 2 1.000000 NA 0.993361 61.300000 psbM gene psbM psbM 31330 31434 -1 105 LSC 0.000000 0 0 300 277 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_026 igs psbM|trnD-GUC psbM-trnD-GUC 31435 32665 0 1231 LSC 0.008130 10 1 300 300 no 1.000000 2 1.000000 NA 0.999188 63.500000 trnD-GUC tRNA trnD-GUC trnD-GUC 32666 32739 -1 74 LSC 0.000000 0 0 28 300 no 0.000000 1 0.000000 NA 1.000000 20.900000 IGS_027 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 32740 33041 0 302 LSC 0.000000 0 0 102 186 no 0.000000 1 0.000000 NA 1.000000 26.400000 trnY-GUA tRNA trnY-GUA trnY-GUA 33042 33125 -1 84 LSC 0.000000 0 0 300 102 no 0.000000 1 0.000000 NA 1.000000 26.400000 IGS_028 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 33126 33247 0 122 LSC 0.009174 1 13 300 240 no 1.000000 2 1.000000 NA 0.893443 60.900000 IGS_029 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 33321 34649 0 1329 LSC 0.006797 8 152 92 125 no 1.000000 2 1.000000 NA 0.885628 57.500000 trnT-GGU tRNA trnT-GGU trnT-GGU 34650 34721 1 72 LSC 0.000000 0 0 116 53 no 0.000000 1 0.000000 NA 1.000000 22.700000 IGS_030 igs trnT-GGU|psbD trnT-GGU-psbD 34722 35860 0 1139 LSC 0.003527 4 5 188 300 no 1.000000 2 1.000000 NA 0.995610 60.300000 psbD gene psbD psbD 35861 36922 1 1062 LSC 0.000000 0 0 107 84 no 0.000000 1 0.000000 NA 1.000000 31.300000 psbC gene psbC psbC 36870 38291 1 1422 LSC 0.000703 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.200000 IGS_032 igs psbC|trnS-UGA psbC-trnS-UGA 38292 38409 0 118 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnS-UGA tRNA trnS-UGA trnS-UGA 38410 38502 -1 93 LSC 0.000000 0 0 300 231 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_033 igs trnS-UGA|psbZ trnS-UGA-psbZ 38503 38854 0 352 LSC 0.002841 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.200000 psbZ gene psbZ psbZ 38855 39043 1 189 LSC 0.000000 0 0 120 139 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_034 igs psbZ|trnG-GCC psbZ-trnG-GCC 39044 39436 0 393 LSC 0.010178 4 0 300 18 no 1.000000 2 1.000000 NA 1.000000 46.600000 trnG-GCC tRNA trnG-GCC trnG-GCC 39437 39507 1 71 LSC 0.014085 1 0 118 162 no 1.000000 2 1.000000 NA 1.000000 54.400000 IGS_035 igs trnG-GCC|trnM-CAU trnG-GCC-trnM-CAU 39508 39676 0 169 LSC 0.005917 1 0 52 300 no 1.000000 2 1.000000 NA 1.000000 44.800000 trnM-CAU tRNA trnM-CAU trnM-CAU 39677 39750 -1 74 LSC 0.000000 0 0 6 300 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_036 igs trnM-CAU|rps14 trnM-CAU-rps14 39751 39908 0 158 LSC 0.000000 0 5 80 300 no 1.000000 2 1.000000 NA 0.968354 46.600000 rps14 gene rps14 rps14 39909 40211 -1 303 LSC 0.000000 0 0 238 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_037 igs rps14|psaB rps14-psaB 40212 40356 0 145 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaB gene psaB psaB 40357 42561 -1 2205 LSC 0.000907 2 0 300 283 no 1.000000 2 1.000000 NA 1.000000 57.800000 IGS_038 igs psaB|psaA psaB-psaA 42562 42586 0 25 LSC 0.000000 0 0 300 258 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 42587 44839 -1 2253 LSC 0.000444 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.400000 IGS_039 igs psaA|ycf3 psaA-ycf3 44840 45569 0 730 LSC 0.002774 2 9 300 237 no 1.000000 2 1.000000 NA 0.987671 61.500000 ycf3 gene ycf3 ycf3 45570 47574 -1 2005 LSC 0.003498 7 4 188 300 no 1.000000 2 1.000000 NA 0.998005 59.000000 IGS_040 igs ycf3|trnS-GGA ycf3-trnS-GGA 47575 48259 0 685 LSC 0.001466 1 3 300 300 no 1.000000 2 1.000000 NA 0.995620 60.000000 trnS-GGA tRNA trnS-GGA trnS-GGA 48260 48346 1 87 LSC 0.000000 0 0 300 228 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_041 igs trnS-GGA|rps4 trnS-GGA-rps4 48347 48676 0 330 LSC 0.003030 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.900000 rps4 gene rps4 rps4 48677 49282 -1 606 LSC 0.000000 0 0 101 32 no 0.000000 1 0.000000 NA 1.000000 27.400000 IGS_042 igs rps4|trnT-UGU rps4-trnT-UGU 49283 49780 0 498 LSC 0.004016 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.900000 trnT-UGU tRNA trnT-UGU trnT-UGU 49781 49853 -1 73 LSC 0.000000 0 0 299 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_043 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 49854 50274 0 421 LSC 0.002375 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.400000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 50275 50309 1 35 LSC 0.000000 0 0 3 300 no 0.000000 1 0.000000 NA 1.000000 19.000000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 50841 50892 1 52 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_046 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 50893 51258 0 366 LSC 0.000000 0 0 300 221 no 0.000000 1 0.000000 NA 1.000000 35.100000 trnF-GAA tRNA trnF-GAA trnF-GAA 51259 51331 1 73 LSC 0.000000 0 0 300 148 no 0.000000 1 0.000000 NA 1.000000 29.800000 IGS_047 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 51332 52174 0 843 LSC 0.008304 7 0 300 300 no 1.000000 2 1.000000 NA 1.000000 63.500000 ndhJ gene ndhJ ndhJ 52175 52651 -1 477 LSC 0.000000 0 0 151 22 no 0.000000 1 0.000000 NA 1.000000 24.100000 IGS_048 igs ndhJ|ndhK ndhJ-ndhK 52652 52755 0 104 LSC 0.009615 1 0 300 150 no 1.000000 2 1.000000 NA 1.000000 54.300000 ndhK gene ndhK ndhK 52756 53502 -1 747 LSC 0.001339 1 0 81 300 no 1.000000 2 1.000000 NA 1.000000 50.600000 ndhC gene ndhC ndhC 53493 53855 -1 363 LSC 0.000000 0 0 300 174 no 0.000000 1 0.000000 NA 1.000000 33.100000 IGS_050 igs ndhC|trnV ndhC-trnV 53856 54764 0 909 LSC 0.003432 3 35 300 300 no 1.000000 2 1.000000 NA 0.961496 64.400000 trnV_part2 tRNA trnV trnV 54765 54790 -1 26 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnV_part1 tRNA trnV trnV 55390 55420 -1 31 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_053 igs trnV|trnM-CAU trnV-trnM-CAU 55421 55594 0 174 LSC 0.000000 0 0 300 188 no 0.000000 1 0.000000 NA 1.000000 32.900000 trnM-CAU tRNA trnM-CAU trnM-CAU 55595 55667 1 73 LSC 0.000000 0 0 300 115 no 0.000000 1 0.000000 NA 1.000000 27.400000 IGS_054 igs trnM-CAU|atpE trnM-CAU-atpE 55668 55830 0 163 LSC 0.006135 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.000000 atpE gene atpE atpE 55831 56241 -1 411 LSC 0.000000 0 0 47 17 no 0.000000 1 0.000000 NA 1.000000 22.300000 atpB gene atpB atpB 56238 57728 -1 1491 LSC 0.000671 1 0 300 123 no 1.000000 2 1.000000 NA 1.000000 53.400000 IGS_056 igs atpB|rbcL atpB-rbcL 57729 58532 0 804 LSC 0.005000 4 4 300 137 no 1.000000 2 1.000000 NA 0.995025 57.400000 rbcL gene rbcL rbcL 58533 59975 1 1443 LSC 0.002772 4 0 107 300 no 1.000000 2 1.000000 NA 1.000000 53.400000 IGS_057 igs rbcL|accD rbcL-accD 59976 60999 0 1024 LSC 0.007168 6 187 224 110 no 1.000000 2 1.000000 NA 0.817383 57.100000 accD gene accD accD 61000 62427 1 1428 LSC 0.001401 2 0 32 300 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_058 igs accD|psaI accD-psaI 62428 63638 0 1211 LSC 0.004160 5 9 300 221 no 1.000000 2 1.000000 NA 0.992568 61.900000 psaI gene psaI psaI 63639 63749 1 111 LSC 0.000000 0 0 40 110 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_059 igs psaI|ycf4 psaI-ycf4 63750 64115 0 366 LSC 0.002778 1 6 151 300 no 1.000000 2 1.000000 NA 0.983607 53.400000 ycf4 gene ycf4 ycf4 64116 64670 1 555 LSC 0.000000 0 0 255 147 no 0.000000 1 0.000000 NA 1.000000 35.100000 IGS_060 igs ycf4|cemA ycf4-cemA 64671 65660 0 990 LSC 0.003033 3 1 300 300 no 1.000000 2 1.000000 NA 0.998990 60.600000 cemA gene cemA cemA 65661 66350 1 690 LSC 0.001449 1 0 300 69 no 1.000000 2 1.000000 NA 1.000000 49.800000 IGS_061 igs cemA|petA cemA-petA 66351 66581 0 231 LSC 0.004329 1 0 288 51 no 1.000000 2 1.000000 NA 1.000000 43.800000 petA gene petA petA 66582 67544 1 963 LSC 0.004154 4 0 161 46 no 1.000000 2 1.000000 NA 1.000000 49.600000 IGS_062 igs petA|psbJ petA-psbJ 67545 68131 0 587 LSC 0.027257 16 0 300 300 no 1.000000 2 1.000000 NA 1.000000 74.200000 psbJ gene psbJ psbJ 68132 68254 -1 123 LSC 0.000000 0 0 59 300 no 0.000000 1 0.000000 NA 1.000000 23.200000 IGS_063 igs psbJ|psbL psbJ-psbL 68255 68379 0 125 LSC 0.000000 0 0 182 300 no 0.000000 1 0.000000 NA 1.000000 32.400000 psbL gene psbL psbL 68380 68496 -1 117 LSC 0.000000 0 0 300 215 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_064 igs psbL|psbF psbL-psbF 68497 68518 0 22 LSC 0.000000 0 0 300 193 no 0.000000 1 0.000000 NA 1.000000 33.200000 psbF gene psbF psbF 68519 68638 -1 120 LSC 0.000000 0 0 300 73 no 0.000000 1 0.000000 NA 1.000000 24.200000 IGS_065 igs psbF|psbE psbF-psbE 68639 68648 0 10 LSC 0.000000 0 0 300 63 no 0.000000 1 0.000000 NA 1.000000 23.500000 psbE gene psbE psbE 68649 68900 -1 252 LSC 0.003968 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.800000 IGS_066 igs psbE|petL psbE-petL 68901 70304 0 1404 LSC 0.003582 5 8 188 155 no 1.000000 2 1.000000 NA 0.994302 58.000000 petL gene petL petL 70305 70400 1 96 LSC 0.000000 0 0 99 59 no 0.000000 1 0.000000 NA 1.000000 23.200000 IGS_067 igs petL|petG petL-petG 70401 70538 0 138 LSC 0.007246 1 0 195 300 no 1.000000 2 1.000000 NA 1.000000 56.300000 petG gene petG petG 70539 70652 1 114 LSC 0.000000 0 0 78 283 no 0.000000 1 0.000000 NA 1.000000 24.600000 IGS_068 igs petG|trnW-CCA petG-trnW-CCA 70653 70776 0 124 LSC 0.000000 0 2 192 159 no 1.000000 2 1.000000 NA 0.983871 51.000000 trnW-CCA tRNA trnW-CCA trnW-CCA 70777 70850 -1 74 LSC 0.000000 0 0 300 85 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_069 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 70851 71014 0 164 LSC 0.006098 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.000000 trnP-UGG tRNA trnP-UGG trnP-UGG 71015 71088 -1 74 LSC 0.000000 0 0 78 300 no 0.000000 1 0.000000 NA 1.000000 24.600000 IGS_070 igs trnP-UGG|psaJ trnP-UGG-psaJ 71089 71444 0 356 LSC 0.000000 0 2 152 204 no 1.000000 2 1.000000 NA 0.994382 50.600000 psaJ gene psaJ psaJ 71445 71579 1 135 LSC 0.000000 0 0 300 69 no 0.000000 1 0.000000 NA 1.000000 23.900000 IGS_071 igs psaJ|cemA psaJ-cemA 71580 72033 0 454 LSC 0.002203 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.000000 cemA gene cemA cemA 72034 72156 1 123 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_072 igs cemA|rps18 cemA-rps18 72157 72374 0 218 LSC 0.000000 0 1 300 149 no 1.000000 2 1.000000 NA 0.995413 49.100000 rps18 gene rps18 rps18 72375 72680 1 306 LSC 0.003268 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.500000 IGS_073 igs rps18|rpl20 rps18-rpl20 72681 72945 0 265 LSC 0.000000 0 0 156 137 no 0.000000 1 0.000000 NA 1.000000 29.000000 rpl20 gene rpl20 rpl20 72946 73299 -1 354 LSC 0.002825 1 0 300 231 no 1.000000 2 1.000000 NA 1.000000 55.200000 IGS_074 igs rpl20|rps12 rpl20-rps12 73300 74092 0 793 LSC 0.001261 1 0 216 300 no 1.000000 2 1.000000 NA 1.000000 59.500000 rps12_part1 gene rps12 rps12 74093 74206 -1 114 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_075 igs rps12|clpP rps12-clpP 74207 74387 0 181 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 clpP gene clpP clpP 74388 76419 -1 2032 LSC 0.000493 1 2 300 127 no 1.000000 2 1.000000 NA 0.999016 52.500000 IGS_076 igs clpP|psbB clpP-psbB 76420 76952 0 533 LSC 0.001876 1 0 300 113 no 1.000000 2 1.000000 NA 1.000000 51.900000 psbB gene psbB psbB 76953 78479 1 1527 LSC 0.001965 3 0 300 40 no 1.000000 2 1.000000 NA 1.000000 47.800000 IGS_077 igs psbB|psbT psbB-psbT 78480 78668 0 189 LSC 0.005291 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.500000 psbT gene psbT psbT 78669 78776 1 108 LSC 0.000000 0 0 148 300 no 0.000000 1 0.000000 NA 1.000000 29.800000 IGS_078 igs psbT|psbN psbT-psbN 78777 78834 0 58 LSC 0.000000 0 0 256 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbN gene psbN psbN 78835 78966 -1 132 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_079 igs psbN|psbH psbN-psbH 78967 79071 0 105 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbH gene psbH psbH 79072 79293 1 222 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_080 igs psbH|petB psbH-petB 79294 80137 0 844 LSC 0.002372 2 1 300 300 no 1.000000 2 1.000000 NA 0.998815 60.200000 petB gene petB petB 80138 80838 1 701 LSC 0.000000 0 0 32 185 no 0.000000 1 0.000000 NA 1.000000 27.400000 IGS_081 igs petB|petD petB-petD 80839 81061 0 223 LSC 0.004484 1 0 300 259 no 1.000000 2 1.000000 NA 1.000000 55.100000 petD gene petD petD 81062 82171 1 1110 LSC 0.000901 1 0 37 45 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_082 igs petD|rpoA petD-rpoA 82172 82386 0 215 LSC 0.018605 4 0 300 269 no 1.000000 2 1.000000 NA 1.000000 63.200000 rpoA gene rpoA rpoA 82387 83400 -1 1014 LSC 0.001972 2 0 160 300 no 1.000000 2 1.000000 NA 1.000000 56.900000 IGS_083 igs rpoA|rps11 rpoA-rps11 83401 83466 0 66 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps11 gene rps11 rps11 83467 83883 -1 417 LSC 0.000000 0 0 300 96 no 0.000000 1 0.000000 NA 1.000000 28.400000 IGS_084 igs rps11|rpl36 rps11-rpl36 83884 83986 0 103 LSC 0.009709 1 0 300 176 no 1.000000 2 1.000000 NA 1.000000 56.300000 rpl36 gene rpl36 rpl36 83987 84100 -1 114 LSC 0.000000 0 0 6 62 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_085 igs rpl36|rps8 rpl36-rps8 84101 84565 0 465 LSC 0.008602 4 0 120 300 no 1.000000 2 1.000000 NA 1.000000 54.900000 rps8 gene rps8 rps8 84566 84964 -1 399 LSC 0.000000 0 0 300 195 no 0.000000 1 0.000000 NA 1.000000 35.400000 IGS_086 igs rps8|rpl14 rps8-rpl14 84965 85132 0 168 LSC 0.000000 0 0 300 27 no 0.000000 1 0.000000 NA 1.000000 20.800000 rpl14 gene rpl14 rpl14 85133 85501 -1 369 LSC 0.002710 1 0 300 44 no 1.000000 2 1.000000 NA 1.000000 43.800000 IGS_087 igs rpl14|rpl16 rpl14-rpl16 85502 85631 0 130 LSC 0.007692 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.900000 rpl16 gene rpl16 rpl16 85632 86042 -1 411 LSC 0.000000 0 0 85 284 no 0.000000 1 0.000000 NA 1.000000 27.400000 IGS_088 igs rpl16|rps3 rpl16-rps3 86043 87331 0 1289 LSC 0.002327 3 0 300 135 no 1.000000 2 1.000000 NA 1.000000 55.200000 rps3 gene rps3 rps3 87332 87988 -1 657 LSC 0.004566 3 0 142 273 no 1.000000 2 1.000000 NA 1.000000 57.000000 IGS_089 igs rps3|rpl22 rps3-rpl22 87989 88034 0 46 LSC 0.000000 0 0 233 227 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl22 gene rpl22 rpl22 88035 88424 -1 390 LSC 0.007692 3 0 279 60 no 1.000000 2 1.000000 NA 1.000000 48.300000 IGS_090 igs rpl22|rps19 rpl22-rps19 88425 88514 0 90 LSC 0.022222 2 0 60 300 no 1.000000 2 1.000000 NA 1.000000 54.800000 rps19 gene rps19 rps19 88515 88793 -1 279 LSC 0.000000 0 0 26 81 no 0.000000 1 0.000000 NA 1.000000 20.700000 IGS_091 igs rps19|rpl2 rps19-rpl2 88794 88883 0 90 IRb 0.011111 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.900000 rpl2 gene rpl2 rpl2 88884 90384 -1 1501 IRb 0.001332 2 0 8 188 no 1.000000 2 1.000000 NA 1.000000 45.100000 IGS_092 igs rpl2|trnM-CAU rpl2-trnM-CAU 90385 90843 0 459 IRb 0.004357 2 0 77 300 no 1.000000 2 1.000000 NA 1.000000 49.100000 trnM-CAU tRNA trnM-CAU trnM-CAU 90844 90917 -1 74 IRb 0.000000 0 0 221 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_093 igs trnM-CAU|ycf2 trnM-CAU-ycf2 90918 90985 0 68 IRb 0.000000 0 0 295 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf2 gene ycf2 ycf2 90986 97894 1 6909 IRb 0.000289 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 52.700000 IGS_094 igs ycf2|trnL-CAA ycf2-trnL-CAA 97895 98912 0 1018 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 trnL-CAA tRNA trnL-CAA trnL-CAA 98913 98993 -1 81 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_095 igs trnL-CAA|ndhB trnL-CAA-ndhB 98994 99616 0 623 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 ndhB gene ndhB ndhB 99617 101825 -1 2209 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 38.500000 IGS_096 igs ndhB|rps7 ndhB-rps7 101826 102155 0 330 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.400000 rps7 gene rps7 rps7 102156 102623 -1 468 IRb 0.002137 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.200000 IGS_097 igs rps7|rps12 rps7-rps12 102624 103232 0 609 IRb 0.000000 0 0 126 300 no 0.000000 1 0.000000 NA 1.000000 34.500000 rps12_part2 gene rps12 rps12 103233 103475 -1 243 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_098 igs rps12|trnV-GAC rps12-trnV-GAC 103476 105404 0 1929 IRb 0.000518 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.200000 trnV-GAC tRNA trnV-GAC trnV-GAC 105405 105476 1 72 IRb 0.000000 0 0 270 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_099 igs trnV-GAC|rrn16S trnV-GAC-rrn16S 105477 105703 0 227 IRb 0.000000 0 0 300 116 no 0.000000 1 0.000000 NA 1.000000 27.400000 rrn16S rRNA rrn16S rrn16S 105704 107194 1 1491 IRb 0.000671 1 0 300 112 no 1.000000 2 1.000000 NA 1.000000 52.500000 IGS_100 igs rrn16S|trnE-UUC rrn16S-trnE-UUC 107195 107489 0 295 IRb 0.003390 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.400000 trnE-UUC_part1 tRNA trnE-UUC trnE-UUC 107490 107521 1 32 IRb 0.000000 0 0 182 300 no 0.000000 1 0.000000 NA 1.000000 32.400000 trnE-UUC_part2 tRNA trnE-UUC trnE-UUC 108468 108507 1 40 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_103 igs trnE-UUC|trnA-UGC trnE-UUC-trnA-UGC 108508 108571 0 64 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 108572 108608 1 37 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 109408 109443 1 36 IRb 0.000000 0 0 137 300 no 0.000000 1 0.000000 NA 1.000000 29.000000 IGS_106 igs trnA-UGC|rrn23S trnA-UGC-rrn23S 109444 109588 0 145 IRb 0.000000 0 0 173 300 no 0.000000 1 0.000000 NA 1.000000 31.700000 rrn23S rRNA rrn23S rrn23S 109589 112398 1 2810 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_107 igs rrn23S|rrn5S rrn23S-rrn5S 112399 112832 0 434 IRb 0.036866 16 0 300 165 no 1.000000 2 1.000000 NA 1.000000 73.900000 rrn5S rRNA rrn5S rrn5S 112833 112963 1 131 IRb 0.000000 0 0 108 34 no 0.000000 1 0.000000 NA 1.000000 21.300000 IGS_108 igs rrn5S|trnR-ACG rrn5S-trnR-ACG 112964 113194 0 231 IRb 0.004329 1 0 239 193 no 1.000000 2 1.000000 NA 1.000000 54.500000 trnR-ACG tRNA trnR-ACG trnR-ACG 113195 113268 1 74 IRb 0.000000 0 0 196 119 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_109 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 113269 113835 0 567 IRb 0.005291 3 0 270 300 no 1.000000 2 1.000000 NA 1.000000 61.100000 trnN-GUU tRNA trnN-GUU trnN-GUU 113836 113907 -1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_110 igs trnN-GUU|ndhF trnN-GUU-ndhF 113908 114996 0 1089 SSC 0.288867 288 92 300 0 yes 1.000000 2 1.000000 NA 0.915519 82.600000 ndhF gene ndhF ndhF 114997 117234 -1 2238 SSC 0.463091 803 504 0 0 yes 1.000000 2 1.000000 NA 0.774799 77.100000 IGS_111 igs ndhF|rpl32 ndhF-rpl32 117235 118474 0 1240 SSC 0.434316 486 121 1 2 yes 1.000000 2 1.000000 NA 0.902419 82.300000 rpl32 gene rpl32 rpl32 118475 118633 1 159 SSC 0.417582 38 68 0 1 no 1.000000 2 1.000000 NA 0.572327 67.200000 IGS_112 igs rpl32|trnL-UAG rpl32-trnL-UAG 118634 119354 0 721 SSC 0.465331 302 72 1 0 yes 1.000000 2 1.000000 NA 0.900139 82.200000 trnL-UAG tRNA trnL-UAG trnL-UAG 119355 119434 1 80 SSC 0.625000 50 0 2 0 no 1.000000 2 1.000000 NA 1.000000 72.500000 IGS_113 igs trnL-UAG|ccsA trnL-UAG-ccsA 119435 119514 0 80 SSC 0.383333 23 20 0 2 no 1.000000 2 1.000000 NA 0.750000 71.700000 ccsA gene ccsA ccsA 119515 120486 1 972 SSC 0.451415 367 159 11 3 yes 1.000000 2 1.000000 NA 0.836420 80.600000 IGS_114 igs ccsA|ndhD ccsA-ndhD 120487 120635 0 149 SSC 0.472973 70 1 0 1 no 1.000000 2 1.000000 NA 0.993289 73.200000 ndhD gene ndhD ndhD 120636 122135 -1 1500 SSC 0.472782 634 159 0 1 yes 1.000000 2 1.000000 NA 0.894000 82.000000 IGS_115 igs ndhD|psaC ndhD-psaC 122136 122266 0 131 SSC 0.531250 51 35 0 1 no 1.000000 2 1.000000 NA 0.732824 71.200000 psaC gene psaC psaC 122267 122512 -1 246 SSC 0.450704 96 33 0 2 yes 1.000000 2 1.000000 NA 0.865854 75.000000 IGS_116 igs psaC|ndhE psaC-ndhE 122513 124078 0 1566 SSC 0.440956 646 101 0 1 yes 1.000000 2 1.000000 NA 0.935504 83.000000 ndhE gene ndhE ndhE 124079 124384 -1 306 SSC 0.487288 115 70 1 2 no 1.000000 2 1.000000 NA 0.771242 72.500000 IGS_117 igs ndhE|ndhG ndhE-ndhG 124385 124770 0 386 SSC 0.434783 130 87 2 22 yes 1.000000 2 1.000000 NA 0.774611 74.400000 ndhG gene ndhG ndhG 124771 125301 -1 531 SSC 0.429907 92 317 2 3 no 1.000000 2 1.000000 NA 0.403013 70.000000 IGS_118 igs ndhG|ndhI ndhG-ndhI 125302 126006 0 705 SSC 0.326498 207 71 0 0 yes 1.000000 2 1.000000 NA 0.899291 82.200000 ndhI gene ndhI ndhI 126007 126549 -1 543 SSC 0.469729 225 64 0 1 yes 1.000000 2 1.000000 NA 0.882136 80.500000 IGS_119 igs ndhI|ndhA ndhI-ndhA 126550 126642 0 93 SSC 0.500000 45 3 2 22 yes 1.000000 2 1.000000 NA 0.967742 75.800000 ndhA gene ndhA ndhA 126643 128825 -1 2183 SSC 0.439854 724 537 3 30 yes 1.000000 2 1.000000 NA 0.754008 76.900000 IGS_120 igs ndhA|ndhH ndhA-ndhH 128826 128826 0 1 SSC 0.000000 0 0 2 29 no 0.000000 1 0.000000 NA 1.000000 18.900000 ndhH gene ndhH ndhH 128827 130008 -1 1182 SSC 0.477469 498 139 3 2 yes 1.000000 2 1.000000 NA 0.882403 81.800000 IGS_121 igs ndhH|rps15 ndhH-rps15 130009 130112 0 104 SSC 0.465909 41 16 3 0 yes 1.000000 2 1.000000 NA 0.846154 74.400000 rps15 gene rps15 rps15 130113 130391 -1 279 SSC 0.525362 145 3 0 9 yes 1.000000 2 1.000000 NA 0.989247 73.500000 IGS_122 igs rps15|ycf1 rps15-ycf1 130392 131393 0 1002 SSC 0.441320 361 184 4 1 yes 1.000000 2 1.000000 NA 0.816367 79.900000 ycf1 gene ycf1 ycf1 131394 137078 -1 5685 SSC 0.444703 2099 965 1 24 yes 1.000000 2 1.000000 NA 0.830255 74.100000 IGS_123 igs ycf1|trnN-GUU ycf1-trnN-GUU 137079 137467 0 389 IRa 0.032877 12 24 24 300 no 1.000000 2 1.000000 NA 0.938303 64.300000 trnN-GUU tRNA trnN-GUU trnN-GUU 137468 137539 1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_124 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 137540 138106 0 567 IRa 0.005291 3 0 300 270 no 1.000000 2 1.000000 NA 1.000000 61.100000 trnR-ACG tRNA trnR-ACG trnR-ACG 138107 138180 -1 74 IRa 0.000000 0 0 119 196 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_125 igs trnR-ACG|rrn5S trnR-ACG-rrn5S 138181 138411 0 231 IRa 0.004329 1 0 193 239 no 1.000000 2 1.000000 NA 1.000000 54.500000 rrn5S rRNA rrn5S rrn5S 138412 138542 -1 131 IRa 0.000000 0 0 34 108 no 0.000000 1 0.000000 NA 1.000000 21.300000 IGS_126 igs rrn5S|rrn23S rrn5S-rrn23S 138543 138976 0 434 IRa 0.036866 16 0 165 300 no 1.000000 2 1.000000 NA 1.000000 73.900000 rrn23S rRNA rrn23S rrn23S 138977 141786 -1 2810 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_127 igs rrn23S|trnA-UGC rrn23S-trnA-UGC 141787 141931 0 145 IRa 0.000000 0 0 300 173 no 0.000000 1 0.000000 NA 1.000000 31.700000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 141932 141967 -1 36 IRa 0.000000 0 0 300 137 no 0.000000 1 0.000000 NA 1.000000 29.000000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 142767 142803 -1 37 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_130 igs trnA-UGC|trnE-UUC trnA-UGC-trnE-UUC 142804 142867 0 64 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnE-UUC_part2 tRNA trnE-UUC trnE-UUC 142868 142907 -1 40 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnE-UUC_part1 tRNA trnE-UUC trnE-UUC 143854 143885 -1 32 IRa 0.000000 0 0 300 182 no 0.000000 1 0.000000 NA 1.000000 32.400000 IGS_133 igs trnE-UUC|rrn16S trnE-UUC-rrn16S 143886 144180 0 295 IRa 0.003390 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.400000 rrn16S rRNA rrn16S rrn16S 144181 145671 -1 1491 IRa 0.000671 1 0 112 300 no 1.000000 2 1.000000 NA 1.000000 52.500000 IGS_134 igs rrn16S|trnV-GAC rrn16S-trnV-GAC 145672 145898 0 227 IRa 0.000000 0 0 116 300 no 0.000000 1 0.000000 NA 1.000000 27.400000 trnV-GAC tRNA trnV-GAC trnV-GAC 145899 145970 -1 72 IRa 0.000000 0 0 300 270 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_135 igs trnV-GAC|rps12 trnV-GAC-rps12 145971 147899 0 1929 IRa 0.000518 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.200000 rps12_part2 gene rps12 rps12 147900 148142 1 243 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_136 igs rps12|rps7 rps12-rps7 148143 148751 0 609 IRa 0.000000 0 0 300 126 no 0.000000 1 0.000000 NA 1.000000 34.500000 rps7 gene rps7 rps7 148752 149219 1 468 IRa 0.002137 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.200000 IGS_137 igs rps7|ndhB rps7-ndhB 149220 149549 0 330 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.400000 ndhB gene ndhB ndhB 149550 151758 1 2209 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 38.500000 IGS_138 igs ndhB|trnL-CAA ndhB-trnL-CAA 151759 152381 0 623 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 trnL-CAA tRNA trnL-CAA trnL-CAA 152382 152462 1 81 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_139 igs trnL-CAA|ycf2 trnL-CAA-ycf2 152463 153480 0 1018 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 ycf2 gene ycf2 ycf2 153481 160389 -1 6909 IRa 0.000289 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 52.700000 IGS_140 igs ycf2|trnM-CAU ycf2-trnM-CAU 160390 160457 0 68 IRa 0.000000 0 0 300 295 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnM-CAU tRNA trnM-CAU trnM-CAU 160458 160531 1 74 IRa 0.000000 0 0 300 221 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_141 igs trnM-CAU|rpl2 trnM-CAU-rpl2 160532 160990 0 459 IRa 0.004357 2 0 300 77 no 1.000000 2 1.000000 NA 1.000000 49.100000 rpl2 gene rpl2 rpl2 160991 162491 1 1501 IRa 0.001332 2 0 188 8 no 1.000000 2 1.000000 NA 1.000000 45.100000 IGS_142 igs rpl2|trnA-GUG rpl2-trnA-GUG 162492 162528 0 37 IRa 0.027027 1 0 300 121 no 1.000000 2 1.000000 NA 1.000000 62.100000 trnA-GUG_part2 tRNA trnA-GUG trnA-GUG 162529 162560 -1 32 IRa 0.000000 0 0 28 89 no 0.000000 1 0.000000 NA 1.000000 20.900000