Hotspot

trnT-UGU-trnL-UAA

LSC · 44843-45805 · 963 bp

Back to Anoectochilus

Pi 0.0408
MarkerSeek score 82.10
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 TCAATCATGGAAAGAGCCGG ACCAATTTCGCCATATCCCC 50.0 50.0 58.0 58.0 696-1093 bp 1.0 89.5
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 639-1036 bp 1.0 89.2
trnT-UGU-trnL-UAA_p3 TCAATCATGGAAAGAGCCGG TAGCGTCTACCAATTTCGCC 50.0 50.0 58.0 58.1 704-1101 bp 1.0 89.0
trnT-UGU-trnL-UAA_p4 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 647-1044 bp 1.0 88.6
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 671-1068 bp 1.0 88.1