Pi
0.00105
MarkerSeek score
54.90
Primer available
yes
Label
ycf2
Feature Metadata
Pi Curve
Haplotype Network
Species Separation
Primer Ranking
| Primer ID | fwd_seq | rev_seq | fwd_gc | rev_gc | fwd_tm | rev_tm | amplicon_size | cross_species_success_rate | primer_score |
|---|---|---|---|---|---|---|---|---|---|
| ycf2_p1 | TTCTTTTGTCCCTTCGAGGC | ATGATACACCAGATCCGGCT | 50.0 | 50.0 | 58.1 | 58.3 | 325 bp | 1.0 | 77.4 |
| ycf2_p2 | GGCGGTCGGAAAAGAAAGAA | ATGATACACCAGATCCGGCT | 50.0 | 50.0 | 58.8 | 58.3 | 308 bp | 1.0 | 72.2 |
| ycf2_p3 | TTCTTTTGTCCCTTCGAGGC | TGATACACCAGATCCGGCTC | 50.0 | 55.0 | 58.1 | 59.0 | 324 bp | 1.0 | 72.0 |
| ycf2_p4 | TTCTTTTGTCCCTTCGAGGC | CCGGCTCGGTTATTGATAGAG | 50.0 | 52.4 | 58.1 | 58.1 | 311 bp | 1.0 | 71.2 |
| ycf2_p5 | TTCTTTTGTCCCTTCGAGGC | CCGGCTCGGTTATTGATAGA | 50.0 | 50.0 | 58.1 | 56.9 | 311 bp | 1.0 | 70.8 |
| ycf2_p1 | TGATTTGACCCCATAAGCGG | TTATCTTTGTTTCCCGGGCC | 50.0 | 50.0 | 57.9 | 58.2 | 245-257 bp | 1.0 | 79.0 |
| ycf2_p2 | TGATTTGACCCCATAAGCGG | CCAAATGTTCGGGAGTTCCT | 50.0 | 50.0 | 57.9 | 57.8 | 318-330 bp | 1.0 | 78.5 |
| ycf2_p3 | TTGACCCCATAAGCGGAATC | TTATCTTTGTTTCCCGGGCC | 50.0 | 50.0 | 57.7 | 58.2 | 241-253 bp | 1.0 | 76.7 |
| ycf2_p4 | GATTTGACCCCATAAGCGGA | TTATCTTTGTTTCCCGGGCC | 50.0 | 50.0 | 57.7 | 58.2 | 244-256 bp | 1.0 | 76.6 |
| ycf2_p5 | TTGACCCCATAAGCGGAATC | CCAAATGTTCGGGAGTTCCT | 50.0 | 50.0 | 57.7 | 57.8 | 314-326 bp | 1.0 | 76.2 |