primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps4-rps16_p1 rps4-rps16 1 GTAAGTGGGTCGGTTTGGAA AAGTCGCACGTTGCTTTCTA 20 20 50.0 45.0 57.7 58.1 0.0 8.1 0.398590 631 1215 608-989 1.000000 88.8 rps4-rps16_p2 rps4-rps16 2 AAGTGGGTCGGTTTGGAAAT AAGTCGCACGTTGCTTTCTA 20 20 45.0 45.0 57.6 58.1 0.0 8.1 0.514338 631 1215 606-987 1.000000 87.9 rps4-rps16_p3 rps4-rps16 3 AGTAAGTGGGTCGGTTTGGA AAGTCGCACGTTGCTTTCTA 20 20 50.0 45.0 58.6 58.1 0.0 8.1 0.712574 631 1215 609-990 1.000000 86.3 rps4-rps16_p4 rps4-rps16 4 GTAAGTGGGTCGGTTTGGAA CGTTGCTTTCTACCACATCG 20 20 50.0 50.0 57.7 57.2 0.0 0.0 1.046989 631 1215 600-981 1.000000 83.6 rps4-rps16_p5 rps4-rps16 5 GTAAGTGGGTCGGTTTGGAA AGTCGCACGTTGCTTTCTAC 20 20 50.0 50.0 57.7 58.9 0.0 8.1 1.121753 631 1215 607-988 1.000000 83.0 rps16-trnK-UUU_p1 rps16-trnK-UUU 1 CATTAATTACGCGAAATCAAAT AAAGCCGAGTACTCTACCGT 22 20 27.3 50.0 52.0 58.2 15.9 20.3 8.158880 2355 3179 791-963 0.818182 44.7 rps16-trnK-UUU_p2 rps16-trnK-UUU 2 CATTAATTACGCGAAATCAAAT AAGCCGAGTACTCTACCGTT 22 20 27.3 50.0 52.0 58.2 15.9 20.3 8.158880 2355 3179 790-962 0.818182 44.7 rps16-trnK-UUU_p3 rps16-trnK-UUU 3 CATTAATTACGCGAAATCAAATT AAAGCCGAGTACTCTACCGT 23 20 26.1 50.0 52.9 58.2 15.9 20.3 8.301402 2355 3179 791-963 0.818182 44.7 rps16-trnK-UUU_p4 rps16-trnK-UUU 4 CATTAATTACGCGAAATCAAATT AAGCCGAGTACTCTACCGTT 23 20 26.1 50.0 52.9 58.2 15.9 20.3 8.301402 2355 3179 790-962 0.818182 44.7 rps16-trnK-UUU_p5 rps16-trnK-UUU 5 CATTAATTACGCGAAATCAAAT TACCGTTGAGTTAGCAACCC 22 20 27.3 50.0 52.0 57.5 15.9 0.0 8.451218 2355 3179 777-949 0.818182 44.7 trnS-GGA-ycf3_p1 trnS-GGA-ycf3 1 CCCTCGGTAAACAAAAGCCT CATTTATCCGCGATCTAGGCA 20 21 50.0 47.6 58.1 58.0 0.0 8.2 1.134847 8981 9854 912-963 1.000000 80.6 trnS-GGA-ycf3_p2 trnS-GGA-ycf3 2 ACGGAAAGAGAGGGATTCGA CATTTATCCGCGATCTAGGCA 20 21 50.0 47.6 58.2 58.0 0.0 8.2 1.191833 8981 9854 933-984 1.000000 80.0 trnS-GGA-ycf3_p3 trnS-GGA-ycf3 3 TTCCAATGCTACGCCTTGAA CATTTATCCGCGATCTAGGCA 20 21 45.0 47.6 57.8 58.0 5.6 8.2 1.233148 8981 9854 883-934 1.000000 80.0 trnS-GGA-ycf3_p4 trnS-GGA-ycf3 4 ACCCTCGGTAAACAAAAGCC CATTTATCCGCGATCTAGGCA 20 21 50.0 47.6 58.4 58.0 0.0 8.2 1.427808 8981 9854 913-964 1.000000 78.2 trnS-GGA-ycf3_p5 trnS-GGA-ycf3 5 CCCTCGGTAAACAAAAGCCT TTTATCCGCGATCTAGGCAT 20 20 50.0 45.0 58.1 56.6 0.0 8.2 1.514239 8981 9854 910-961 1.000000 77.6 trnT-GGU-trnE-UUC_p1 trnT-GGU-trnE-UUC 1 GAACCGATGACTTACGCCTT AGCCTCCTTTCCTAGTACCC 20 20 50.0 55.0 58.0 57.8 0.0 0.0 0.183782 23307 23991 814-874 1.000000 87.2 trnT-GGU-trnE-UUC_p2 trnT-GGU-trnE-UUC 2 GAACCGATGACTTACGCCTT GCCTCCTTTCCTAGTACCCT 20 20 50.0 55.0 58.0 57.8 0.0 0.0 0.183782 23307 23991 813-873 1.000000 87.2 trnT-GGU-trnE-UUC_p3 trnT-GGU-trnE-UUC 3 GAACCGATGACTTACGCCTT GCTGCCTCCTTGAAAGAGAG 20 20 50.0 55.0 58.0 58.3 0.0 0.0 0.269359 23307 23991 769-829 1.000000 86.8 trnT-GGU-trnE-UUC_p4 trnT-GGU-trnE-UUC 4 TACCGCTGAGTTAAAAGGGC AGCCTCCTTTCCTAGTACCC 20 20 50.0 55.0 57.9 57.8 0.0 0.0 0.281349 23307 23991 779-839 1.000000 86.6 trnT-GGU-trnE-UUC_p5 trnT-GGU-trnE-UUC 5 TACCGCTGAGTTAAAAGGGC GCCTCCTTTCCTAGTACCCT 20 20 50.0 55.0 57.9 57.8 0.0 0.0 0.281349 23307 23991 778-838 1.000000 86.6 trnD-GUC-psbM_p1 trnD-GUC-psbM 1 GTTCGAGCCCCGTCAGTC AGAATGAACAGTGCAGTAGC 18 20 66.7 45.0 60.1 55.8 0.0 0.0 6.355329 24690 25767 869-1204 1.000000 51.3 trnD-GUC-psbM_p2 trnD-GUC-psbM 2 GTTCGAGCCCCGTCAGTC TCGTTTTGACTGACCGTTTT 18 20 66.7 40.0 60.1 56.1 0.0 0.0 5.983440 24690 25767 923-1258 1.000000 51.0 trnD-GUC-psbM_p3 trnD-GUC-psbM 3 GTTCGAGCCCCGTCAGTC AATCGTTTTGACTGACCGTT 18 20 66.7 40.0 60.1 55.9 0.0 0.0 6.212214 24690 25767 925-1260 1.000000 51.0 trnD-GUC-psbM_p4 trnD-GUC-psbM 4 GTTCGAGCCCCGTCAGTC ATCGTTTTGACTGACCGTTT 18 20 66.7 40.0 60.1 55.9 0.0 0.0 6.212214 24690 25767 924-1259 1.000000 51.0 trnD-GUC-psbM_p5 trnD-GUC-psbM 5 GTTCGAGCCCCGTCAGTC TCGTTTTGACTGACCGTTTTT 18 21 66.7 38.1 60.1 56.9 0.0 0.0 6.232772 24690 25767 923-1258 1.000000 51.0 trnG-UCC_p1 trnG-UCC 1 TCACATTAATGATACACGCATCA TCTTGTTCGACAAATGGTCCA 23 21 34.8 42.9 56.4 57.8 22.2 0.0 5.773616 45602 46433 865-928 0.909091 46.1 trnG-UCC_p2 trnG-UCC 2 TTCACATTAATGATACACGCATCA TCTTGTTCGACAAATGGTCCA 24 21 33.3 42.9 57.1 57.8 22.2 0.0 6.118571 45602 46433 866-929 0.909091 46.1 trnG-UCC_p3 trnG-UCC 3 CACATTAATGATACACGCATCA TCTTGTTCGACAAATGGTCCA 22 21 36.4 42.9 55.0 57.8 22.2 0.0 6.201676 45602 46433 864-927 0.909091 46.1 trnG-UCC_p4 trnG-UCC 4 TCACATTAATGATACACGCATCA CTTGTTCGACAAATGGTCCA 23 20 34.8 45.0 56.4 56.3 22.2 0.0 6.299672 45602 46433 864-927 0.909091 46.1 trnG-UCC_p5 trnG-UCC 5 TCACATTAATGATACACGCATCAT TCTTGTTCGACAAATGGTCCA 24 21 33.3 42.9 56.9 57.8 22.2 0.0 6.309195 45602 46433 865-928 0.909091 46.1 trnG-UCC-trnS-GCU_p1 trnG-UCC-trnS-GCU 1 ACGAATCACACTTTTACCACT TTATTCGTACCGAGGGTTCG 21 20 38.1 50.0 55.5 57.2 0.0 7.4 4.385723 46434 47606 1114-1458 1.000000 56.9 trnG-UCC-trnS-GCU_p2 trnG-UCC-trnS-GCU 2 ACGAATCACACTTTTACCACT TTCGAATCCCTCTCTTTCCG 21 20 38.1 50.0 55.5 57.0 0.0 0.0 4.497369 46434 47606 1098-1442 1.000000 56.0 trnG-UCC-trnS-GCU_p3 trnG-UCC-trnS-GCU 3 AGAACGAATCACACTTTTACCAC TTATTCGTACCGAGGGTTCG 23 20 39.1 50.0 57.3 57.2 0.0 7.4 4.518439 46434 47606 1117-1461 1.000000 55.9 trnG-UCC-trnS-GCU_p4 trnG-UCC-trnS-GCU 4 GAACGAATCACACTTTTACCACT TTATTCGTACCGAGGGTTCG 23 20 39.1 50.0 57.3 57.2 0.0 7.4 4.518439 46434 47606 1116-1460 1.000000 55.9 trnG-UCC-trnS-GCU_p5 trnG-UCC-trnS-GCU 5 ACGAATCACACTTTTACCACT GGGTTCGAATCCCTCTCTTT 21 20 38.1 50.0 55.5 56.9 0.0 17.2 4.618397 46434 47606 1101-1445 1.000000 55.1 trnS-GCU-trnL-UAA_p1 trnS-GCU-trnL-UAA 1 CAATCCGACGCTTTAGTCCA CTACCAATTCCGCCATACCC 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.112373 47695 48394 685-825 1.000000 91.1 trnS-GCU-trnL-UAA_p2 trnS-GCU-trnL-UAA 2 AATCCGACGCTTTAGTCCAC CTACCAATTCCGCCATACCC 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.113761 47695 48394 684-824 1.000000 91.1 trnS-GCU-trnL-UAA_p3 trnS-GCU-trnL-UAA 3 CAATCCGACGCTTTAGTCCA AATCCAACCAAGTCCGTAGC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.114007 47695 48394 707-847 1.000000 91.0 trnS-GCU-trnL-UAA_p4 trnS-GCU-trnL-UAA 4 AATCCGACGCTTTAGTCCAC AATCCAACCAAGTCCGTAGC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.115395 47695 48394 706-846 1.000000 91.0 trnS-GCU-trnL-UAA_p5 trnS-GCU-trnL-UAA 5 CAATCCGACGCTTTAGTCCA CCGTAGCGTCTACCAATTCC 20 20 50.0 55.0 58.0 58.2 0.0 10.2 0.155486 47695 48394 694-834 1.000000 90.8 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TCATATTCGTGAAGCAGAAACA AGAAGGTCTACGGTTCGAGT 22 20 36.4 50.0 56.1 57.8 0.0 0.0 4.083948 51457 52585 1092-1213 1.000000 59.3 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TCATATTCGTGAAGCAGAAACA GAAGGTCTACGGTTCGAGTC 22 20 36.4 55.0 56.1 57.5 0.0 0.0 4.427720 51457 52585 1091-1212 1.000000 56.6 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TCATATTCGTGAAGCAGAAACA GTTCGAGTCCGTATAGCCCT 22 20 36.4 55.0 56.1 58.7 0.0 0.0 4.570014 51457 52585 1080-1201 1.000000 55.4 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 CATATTCGTGAAGCAGAAACA AGAAGGTCTACGGTTCGAGT 21 20 38.1 50.0 54.6 57.8 0.0 0.0 4.585537 51457 52585 1091-1212 1.000000 55.3 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TCATATTCGTGAAGCAGAAACAT AGAAGGTCTACGGTTCGAGT 23 20 34.8 50.0 56.6 57.8 0.0 0.0 4.587896 51457 52585 1092-1213 1.000000 55.3 petL-petG_p1 petL-petG 1 TGGTCTGAGCAAGATACGAC ACGAATAACCCAGCCAAAGT 20 20 50.0 45.0 57.1 57.4 7.1 0.0 1.520863 66985 67159 262-292 1.000000 77.5 petL-petG_p2 petL-petG 2 TTGGTCTGAGCAAGATACGAC ACGAATAACCCAGCCAAAGT 21 20 47.6 45.0 57.8 57.4 17.5 0.0 1.811623 66985 67159 263-293 1.000000 75.2 petL-petG_p3 petL-petG 3 GGTCTGAGCAAGATACGACT ACGAATAACCCAGCCAAAGT 20 20 50.0 45.0 56.8 57.4 1.3 0.0 1.816920 66985 67159 261-291 1.000000 75.2 petL-petG_p4 petL-petG 4 TGGTCTGAGCAAGATACGAC ACGCAGTTACGAATAACCCA 20 20 50.0 45.0 57.1 57.3 7.1 0.0 1.688849 66985 67159 270-300 0.909091 72.2 petL-petG_p5 petL-petG 5 TGGTCTGAGCAAGATACGAC AGGCCTAACACGATTCCAAA 20 20 50.0 45.0 57.1 57.1 7.1 1.3 1.812549 66985 67159 232-262 0.909091 71.4 rps12-clpP_p1 rps12-clpP 1 AGAGCGGGGGATTTTGTTAC ATCGAAAATGCCGGGGATTT 20 20 50.0 45.0 57.9 58.2 0.0 19.4 0.348892 70805 70970 243-266 1.000000 87.8 rps12-clpP_p2 rps12-clpP 2 GAGCGGGGGATTTTGTTACA ATCGAAAATGCCGGGGATTT 20 20 50.0 45.0 58.2 58.2 0.0 19.4 0.395636 70805 70970 242-265 1.000000 87.4 rps12-clpP_p3 rps12-clpP 3 AGAGCGGGGGATTTTGTTAC GAAAATGCCGGGGATTTCAC 20 20 50.0 50.0 57.9 57.7 0.0 24.2 0.417954 70805 70970 240-263 1.000000 87.0 rps12-clpP_p4 rps12-clpP 4 GAGCGGGGGATTTTGTTACA GAAAATGCCGGGGATTTCAC 20 20 50.0 50.0 58.2 57.7 0.0 24.2 0.464698 70805 70970 239-262 1.000000 86.6 rps12-clpP_p5 rps12-clpP 5 CACCCGAGTACATGTTCCTC ATCGAAAATGCCGGGGATTT 20 20 55.0 45.0 57.7 58.2 2.3 19.4 0.519868 70805 70970 283-306 1.000000 85.8 ndhF_p1 ndhF 1 ATTTGGTGGTGGTGAACTCC CTCACTCCGTTCTCCAACAG 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.076312 111966 114197 2922-2966 0.545455 68.0 ndhF_p2 ndhF 2 ATTTGGTGGTGGTGAACTCC AACAGGCTAGTTCACAACCG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.125671 111966 114197 2907-2951 0.545455 67.6 ndhF_p3 ndhF 3 TGGTGAACTCCCGCTTACTA CTCACTCCGTTCTCCAACAG 20 20 50.0 55.0 58.1 57.9 0.0 0.0 0.144201 111966 114197 2913-2957 0.545455 67.5 ndhF_p4 ndhF 4 GAACTCCCGCTTACTACTGC CTCACTCCGTTCTCCAACAG 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.147789 111966 114197 2909-2953 0.545455 67.5 ndhF_p5 ndhF 5 ATTTGGTGGTGGTGAACTCC AAGCAACTCACTCCGTTCTC 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.160967 111966 114197 2928-2972 0.545455 67.3 ndhF-rpl32_p1 ndhF-rpl32 1 AAGGGGGACGAAAGGTATGA AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.046697 114198 115856 983-2212 1.000000 91.6 ndhF-rpl32_p2 ndhF-rpl32 2 AAGGGGGACGAAAGGTATGA CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.048068 114198 115856 984-2213 1.000000 91.6 ndhF-rpl32_p3 ndhF-rpl32 3 ACGAAAGGTATGATCCACGC AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.071898 114198 115856 976-2205 1.000000 91.4 ndhF-rpl32_p4 ndhF-rpl32 4 CGAAAGGTATGATCCACGCA AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.073242 114198 115856 975-2204 1.000000 91.4 ndhF-rpl32_p5 ndhF-rpl32 5 AAGGGGGACGAAAGGTATGA GGAGGAGGCAATTCGCAATA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.071549 114198 115856 909-2138 0.818182 84.2 ccsA-ndhD_p1 ccsA-ndhD 1 ATTCTGCAATTGTGGCTTCT ATCCGGATTTCGTTCTCTCA 20 20 40.0 45.0 55.9 56.4 7.4 12.4 3.741746 117157 117411 415-647 1.000000 62.1 ccsA-ndhD_p2 ccsA-ndhD 2 ATTCTGCAATTGTGGCTTCT TCCGGATTTCGTTCTCTCAT 20 20 40.0 45.0 55.9 56.4 7.4 0.0 3.741746 117157 117411 414-646 1.000000 62.1 ccsA-ndhD_p3 ccsA-ndhD 3 TCAAATTCTGCAATTGTGGCT ATCCGGATTTCGTTCTCTCA 21 20 38.1 45.0 57.0 56.4 7.4 12.4 3.674354 117157 117411 419-651 0.909091 59.0 ccsA-ndhD_p4 ccsA-ndhD 4 TCAAATTCTGCAATTGTGGCT TCCGGATTTCGTTCTCTCAT 21 20 38.1 45.0 57.0 56.4 7.4 0.0 3.674354 117157 117411 418-650 0.909091 59.0 ccsA-ndhD_p5 ccsA-ndhD 5 TCAAATTCTGCAATTGTGGCT TCCGGATTTCGTTCTCTCATT 21 21 38.1 42.9 57.0 57.1 7.4 0.0 3.921210 117157 117411 418-650 0.909091 57.0 ndhE-ndhG_p1 ndhE-ndhG 1 TCAAGAAATCGGTTGGGCAA TGGACTGTTGGAGATGGAGT 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.041734 119855 120114 1234-1271 1.000000 89.4 ndhE-ndhG_p2 ndhE-ndhG 2 TCAAGAAATCGGTTGGGCAA CCATTTTGTAGCTGCTGCAC 20 20 45.0 50.0 58.0 58.0 0.0 20.1 0.025009 119855 120114 1346-1383 1.000000 89.1 ndhE-ndhG_p3 ndhE-ndhG 3 CGTCCCAGGGTATCATCTCT TGGACTGTTGGAGATGGAGT 20 20 55.0 50.0 58.0 58.0 5.0 0.0 0.032533 119855 120114 1141-1178 0.818182 80.5 ndhE-ndhG_p4 ndhE-ndhG 4 CGTCCCAGGGTATCATCTCT CCATTTTGTAGCTGCTGCAC 20 20 55.0 50.0 58.0 58.0 5.0 20.1 0.015807 119855 120114 1253-1290 0.818182 80.3 ndhE-ndhG_p5 ndhE-ndhG 5 CGTCCCAGGGTATCATCTCT GTGGGAAGTCTAGGAGTGGT 20 20 55.0 55.0 58.0 58.1 5.0 0.0 0.062525 119855 120114 1357-1394 0.818182 79.5 ndhG-ndhI_p1 ndhG-ndhI 1 ATTGGTCCAGGCAAATCCAT TTCAAGAACAATTACCAATTACT 20 23 45.0 26.1 57.4 52.3 0.0 0.0 9.277375 120649 121022 419-535 1.000000 52.0 ndhG-ndhI_p2 ndhG-ndhI 2 ATTGGTCCAGGCAAATCCAT GATTCAAGAACAATTACCAATTACT 20 25 45.0 28.0 57.4 54.1 0.0 0.0 9.433553 120649 121022 421-537 1.000000 52.0 ndhG-ndhI_p3 ndhG-ndhI 3 ATTGGTCCAGGCAAATCCAT ATTCAAGAACAATTACCAATTACT 20 24 45.0 25.0 57.4 52.9 0.0 0.0 9.643930 120649 121022 420-536 1.000000 52.0 ndhG-ndhI_p4 ndhG-ndhI 4 ATTGGTCCAGGCAAATCCAT GATTCAAGAACAATTACCAATTAC 20 24 45.0 29.2 57.4 52.7 0.0 0.0 9.806570 120649 121022 421-537 1.000000 52.0 ndhG-ndhI_p5 ndhG-ndhI 5 TCATGTATTGGTCCAGGCAA TTCAAGAACAATTACCAATTACT 20 23 45.0 26.1 56.8 52.3 0.0 0.0 9.913369 120649 121022 425-541 1.000000 52.0 ycf1_p1 ycf1 1 ATCCCCGATTAGTTTGGTGC AGGCCCAAAGGATTCCCTAT 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.125731 126477 126596 1077-1113 0.909091 84.1 ycf1_p2 ycf1 2 ATCCCCGATTAGTTTGGTGC GGGGCCAGTGCTAACATTAA 20 20 50.0 50.0 57.9 57.9 0.0 4.4 0.190592 126477 126596 871-901 0.909091 83.7 ycf1_p3 ycf1 3 TCCCATTTTCATATCGCGCA GGGGCCAGTGCTAACATTAA 20 20 45.0 50.0 58.0 57.9 8.7 4.4 0.177393 126477 126596 937-967 0.818182 79.5 ycf1_p4 ycf1 4 TCCCATTTTCATATCGCGCA AGGCCCAAAGGATTCCCTAT 20 20 45.0 50.0 58.0 58.1 8.7 0.0 0.112532 126477 126596 1143-1179 0.818182 79.3 ycf1_p5 ycf1 5 TCCCATTTTCATATCGCGCA AATGAGGCCCAAAGGATTCC 20 20 45.0 50.0 58.0 57.8 8.7 0.0 0.204941 126477 126596 1147-1183 0.818182 78.5