Hotspot

trnT-UGU-trnL-UAA

LSC · 51186-52203 · 1018 bp

Back to Ampelopsis

Pi 0.0056
MarkerSeek score 56.60
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 1022-1069 bp 1.0 84.6
trnT-UGU-trnL-UAA_p2 AAAGCCAGCTATCGGAATCG ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 1067-1114 bp 1.0 84.5
trnT-UGU-trnL-UAA_p3 AAAGCCAGCTATCGGAATCG TAGCGTCTACCAATTTCGCC 50.0 50.0 58.1 58.1 1075-1122 bp 1.0 84.0
trnT-UGU-trnL-UAA_p4 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 1030-1077 bp 1.0 84.0
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 1054-1101 bp 1.0 83.7