feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score psbA gene psbA psbA 81 1142 -1 1062 LSC 0.007533 12 0 26 59 no 1.000000 3 1.000000 0.007533 1.000000 50.500000 IGS_001 igs psbA|matK psbA-matK 1143 1672 0 530 LSC 0.015396 10 97 36 8 no 1.000000 3 1.000000 0.015396 0.816981 52.300000 matK gene matK matK 1673 3217 -1 1545 LSC 0.015534 36 0 12 17 no 1.000000 3 1.000000 0.015534 1.000000 54.500000 IGS_002 igs matK|rps16 matK-rps16 3218 4490 0 1273 LSC 0.024760 46 39 31 21 no 1.000000 3 1.000000 0.024965 0.983504 64.100000 rps16 gene rps16 rps16 4491 5611 -1 1121 LSC 0.017032 26 146 25 31 no 1.000000 3 1.000000 0.015655 0.977698 60.600000 IGS_003 igs rps16|trnQ-TTG rps16-trnQ-TTG 5612 6749 0 1138 LSC 0.028026 47 22 138 121 yes 1.000000 3 1.000000 0.028053 0.982425 72.400000 trnQ-TTG tRNA trnQ-TTG trnQ-TTG 6750 6821 -1 72 LSC 0.000000 0 0 24 49 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 IGS_004 igs trnQ-TTG|psbK trnQ-TTG-psbK 6822 7181 0 360 LSC 0.020774 11 7 96 98 no 1.000000 3 1.000000 0.020774 0.980556 60.900000 psbK gene psbK psbK 7182 7367 1 186 LSC 0.007168 2 0 11 8 no 0.333333 2 0.500000 0.007168 1.000000 30.200000 IGS_005 igs psbK|psbI psbK-psbI 7368 7754 0 387 LSC 0.042328 24 9 63 148 yes 1.000000 3 1.000000 0.042328 0.976744 73.000000 psbI gene psbI psbI 7755 7865 1 111 LSC 0.000000 0 0 14 37 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_006 igs psbI|trnS-GCT psbI-trnS-GCT 7866 7977 0 112 LSC 0.035714 6 0 125 103 no 1.000000 3 1.000000 0.035714 1.000000 68.000000 trnS-GCT tRNA trnS-GCT trnS-GCT 7978 8065 -1 88 LSC 0.000000 0 0 10 15 no 0.000000 1 0.000000 0.000000 1.000000 19.500000 IGS_007 igs trnS-GCT|psbD trnS-GCT-psbD 8066 9080 0 1015 LSC 0.021592 32 27 98 10 no 1.000000 3 1.000000 0.021592 0.973399 60.600000 psbD gene psbD psbD 9081 10142 1 1062 LSC 0.007533 12 0 50 57 no 1.000000 3 1.000000 0.007533 1.000000 52.300000 psbC gene psbC psbC 10090 11511 1 1422 LSC 0.010783 23 0 141 53 no 1.000000 3 1.000000 0.010783 1.000000 54.600000 IGS_009 igs psbC|trnS-TGA psbC-trnS-TGA 11512 11666 0 155 LSC 0.008772 2 3 195 32 no 0.333333 2 0.500000 0.008772 0.980645 34.700000 trnS-TGA tRNA trnS-TGA trnS-TGA 11667 11754 -1 88 LSC 0.015152 2 0 53 37 no 0.333333 2 0.500000 0.015152 1.000000 37.400000 IGS_010 igs trnS-TGA|psbZ trnS-TGA-psbZ 11755 12097 0 343 LSC 0.017493 9 0 52 125 no 0.333333 2 0.500000 0.017493 1.000000 40.900000 psbZ gene psbZ psbZ 12098 12286 1 189 LSC 0.015873 4 0 5 5 no 1.000000 3 1.000000 0.015873 1.000000 47.700000 IGS_011 igs psbZ|trnG-GCC psbZ-trnG-GCC 12287 12576 0 290 LSC 0.029988 13 1 33 83 no 1.000000 3 1.000000 0.029988 0.996552 59.400000 trnG-GCC tRNA trnG-GCC trnG-GCC 12577 12647 1 71 LSC 0.000000 0 0 18 12 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_012 igs trnG-GCC|trnfM-CAT trnG-GCC-trnfM-CAT 12648 13067 0 420 LSC 0.029126 18 8 89 74 no 1.000000 3 1.000000 0.029126 0.980952 65.800000 trnfM-CAT tRNA trnfM-CAT trnfM-CAT 13068 13141 -1 74 LSC 0.000000 0 0 9 0 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_013 igs trnfM-CAT|trnT-GGT trnfM-CAT-trnT-GGT 13142 15903 0 2762 LSC 0.034504 134 76 83 66 yes 1.000000 3 1.000000 0.031391 0.989862 70.600000 trnT-GGT tRNA trnT-GGT trnT-GGT 15904 15975 1 72 LSC 0.009259 1 0 8 26 no 0.333333 2 0.500000 0.009259 1.000000 31.500000 trnT-AGT tRNA trnT-AGT trnT-AGT 15971 16042 1 72 LSC 0.037037 4 0 0 32 no 1.000000 3 1.000000 0.037037 1.000000 61.100000 IGS_015 igs trnT-AGT|trnE-TTC trnT-AGT-trnE-TTC 16043 16502 0 460 LSC 0.023547 16 8 19 126 no 1.000000 3 1.000000 0.023574 0.984783 58.800000 trnE-TTC tRNA trnE-TTC trnE-TTC 16503 16575 1 73 LSC 0.000000 0 0 92 53 no 0.000000 1 0.000000 0.000000 1.000000 22.700000 IGS_016 igs trnE-TTC|trnY-GTA trnE-TTC-trnY-GTA 16576 16636 0 61 LSC 0.010929 1 0 165 79 no 0.333333 2 0.500000 0.010929 1.000000 37.900000 trnY-GTA tRNA trnY-GTA trnY-GTA 16637 16720 1 84 LSC 0.007937 1 0 7 14 no 0.333333 2 0.500000 0.007937 1.000000 30.600000 IGS_017 igs trnY-GTA|trnD-GTC trnY-GTA-trnD-GTC 16721 17065 0 345 LSC 0.025267 13 3 4 120 no 1.000000 3 1.000000 0.025310 0.994203 55.700000 trnD-GTC tRNA trnD-GTC trnD-GTC 17066 17139 1 74 LSC 0.000000 0 0 0 46 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_018 igs trnD-GTC|psbM trnD-GTC-psbM 17140 18207 0 1068 LSC 0.030070 47 27 74 56 yes 1.000000 3 1.000000 0.030087 0.975655 69.300000 psbM gene psbM psbM 18208 18312 1 105 LSC 0.006349 1 0 59 34 no 0.333333 2 0.500000 0.006349 1.000000 31.600000 IGS_019 igs psbM|petN psbM-petN 18313 19100 0 788 LSC 0.023625 27 13 48 15 no 1.000000 3 1.000000 0.023642 0.984772 61.300000 petN gene petN petN 19101 19190 -1 90 LSC 0.007407 1 0 8 24 no 0.333333 2 0.500000 0.007407 1.000000 30.300000 IGS_020 igs petN|trnC-GCA petN-trnC-GCA 19191 19888 0 698 LSC 0.022426 22 44 74 91 no 1.000000 3 1.000000 0.022426 0.936963 67.500000 trnC-GCA tRNA trnC-GCA trnC-GCA 19889 19959 -1 71 LSC 0.000000 0 0 56 20 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_021 igs trnC-GCA|rpoB trnC-GCA-rpoB 19960 21140 0 1181 LSC 0.021615 38 14 127 4 no 1.000000 3 1.000000 0.021672 0.992379 59.000000 rpoB gene rpoB rpoB 21141 24368 1 3228 LSC 0.010326 50 0 66 12 no 1.000000 3 1.000000 0.010326 1.000000 47.800000 IGS_022 igs rpoB|rpoC1 rpoB-rpoC1 24369 24405 0 37 LSC 0.018018 1 0 30 80 no 0.333333 2 0.500000 0.018018 1.000000 38.700000 rpoC1 gene rpoC1 rpoC1 24406 26457 1 2052 LSC 0.008772 27 0 24 58 no 1.000000 3 1.000000 0.008772 1.000000 50.000000 IGS_023 igs rpoC1|rpoC2 rpoC1-rpoC2 26458 26654 0 197 LSC 0.010152 3 0 255 56 no 0.333333 2 0.500000 0.010152 1.000000 35.700000 rpoC2 gene rpoC2 rpoC2 26655 31244 1 4590 LSC 0.015235 104 45 19 11 no 1.000000 3 1.000000 0.015246 0.991503 49.600000 IGS_024 igs rpoC2|rps2 rpoC2-rps2 31245 31558 0 314 LSC 0.023729 10 24 6 45 no 1.000000 3 1.000000 0.021664 0.939490 57.000000 rps2 gene rps2 rps2 31559 32269 1 711 LSC 0.008439 9 0 20 14 no 1.000000 3 1.000000 0.008439 1.000000 50.200000 IGS_025 igs rps2|atpI rps2-atpI 32270 32519 0 250 LSC 0.025333 9 9 27 35 no 1.000000 3 1.000000 0.023065 1.000000 59.500000 atpI gene atpI atpI 32520 33263 1 744 LSC 0.005376 6 0 71 31 no 1.000000 3 1.000000 0.005376 1.000000 49.500000 IGS_026 igs atpI|atpH atpI-atpH 33264 34106 0 843 LSC 0.028331 32 92 99 65 yes 1.000000 3 1.000000 0.028375 0.893238 68.800000 atpH gene atpH atpH 34107 34352 1 246 LSC 0.005420 2 0 3 69 no 1.000000 3 1.000000 0.005420 1.000000 41.200000 IGS_027 igs atpH|atpF atpH-atpF 34353 34826 0 474 LSC 0.018558 13 7 99 104 no 1.000000 3 1.000000 0.018558 0.985232 61.700000 atpF gene atpF atpF 34827 36207 1 1381 LSC 0.010138 21 0 1 252 no 1.000000 3 1.000000 0.010138 1.000000 50.300000 IGS_028 igs atpF|atpA atpF-atpA 36208 36301 0 94 LSC 0.000000 0 0 126 158 no 0.000000 1 0.000000 0.000000 1.000000 28.200000 atpA gene atpA atpA 36302 37825 1 1524 LSC 0.007437 17 0 220 8 no 1.000000 3 1.000000 0.007437 1.000000 49.000000 IGS_029 igs atpA|trnR-TCT atpA-trnR-TCT 37826 37963 0 138 LSC 0.009662 2 0 66 76 no 0.333333 2 0.500000 0.009662 1.000000 36.100000 trnR-TCT tRNA trnR-TCT trnR-TCT 37964 38035 -1 72 LSC 0.000000 0 0 41 4 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_030 igs trnR-TCT|trnfM-CAT trnR-TCT-trnfM-CAT 38036 38110 0 75 LSC 0.051643 5 7 113 18 yes 1.000000 3 1.000000 0.052886 0.946667 73.700000 trnfM-CAT tRNA trnfM-CAT trnfM-CAT 38111 38192 -1 82 LSC 0.016260 2 0 8 12 no 0.333333 2 0.500000 0.016260 1.000000 36.000000 IGS_031 igs trnfM-CAT|rps14 trnfM-CAT-rps14 38193 38341 0 149 LSC 0.022371 5 0 50 162 no 0.333333 2 0.500000 0.022371 1.000000 43.000000 rps14 gene rps14 rps14 38342 38653 -1 312 LSC 0.008547 4 0 1 14 no 1.000000 3 1.000000 0.008547 1.000000 43.300000 IGS_032 igs rps14|psaB rps14-psaB 38654 38775 0 122 LSC 0.027322 5 0 72 147 no 1.000000 3 1.000000 0.027322 1.000000 60.300000 psaB gene psaB psaB 38776 40980 -1 2205 LSC 0.007861 26 0 29 23 no 1.000000 3 1.000000 0.007861 1.000000 49.000000 IGS_033 igs psaB|psaA psaB-psaA 40981 41005 0 25 LSC 0.026667 1 0 155 147 no 0.333333 2 0.500000 0.026667 1.000000 53.000000 psaA gene psaA psaA 41006 43258 -1 2253 LSC 0.006510 22 0 1 58 no 1.000000 3 1.000000 0.006510 1.000000 46.400000 IGS_034 igs psaA|ycf3 psaA-ycf3 43259 43899 0 641 LSC 0.023097 22 6 29 235 no 1.000000 3 1.000000 0.023097 0.990640 61.500000 ycf3 gene ycf3 ycf3 43900 45886 -1 1987 LSC 0.009409 28 8 7 80 no 1.000000 3 1.000000 0.009421 0.998490 49.700000 IGS_035 igs ycf3|trnS-GGA ycf3-trnS-GGA 45887 46455 0 569 LSC 0.037892 32 6 92 111 yes 1.000000 3 1.000000 0.037892 0.989455 75.100000 trnS-GGA tRNA trnS-GGA trnS-GGA 46456 46542 1 87 LSC 0.000000 0 0 2 24 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_036 igs trnS-GGA|rps4 trnS-GGA-rps4 46543 46821 0 279 LSC 0.022700 9 0 89 111 no 1.000000 3 1.000000 0.022700 1.000000 58.400000 rps4 gene rps4 rps4 46822 47427 -1 606 LSC 0.012101 11 0 6 66 no 1.000000 3 1.000000 0.012101 1.000000 51.900000 IGS_037 igs rps4|trnT-TGT rps4-trnT-TGT 47428 47730 0 303 LSC 0.017602 8 1 42 77 no 1.000000 3 1.000000 0.017638 1.000000 52.300000 trnT-TGT tRNA trnT-TGT trnT-TGT 47731 47803 -1 73 LSC 0.000000 0 0 37 4 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_038 igs trnT-TGT|trnF-GAA trnT-TGT-trnF-GAA 47804 49520 0 1717 LSC 0.026290 67 20 110 76 yes 1.000000 3 1.000000 0.026306 0.989517 66.800000 trnF-GAA tRNA trnF-GAA trnF-GAA 49521 49593 1 73 LSC 0.000000 0 0 36 3 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_039 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 49594 50176 0 583 LSC 0.036905 30 30 109 54 yes 1.000000 3 1.000000 0.035974 0.960549 75.300000 ndhJ gene ndhJ ndhJ 50177 50656 -1 480 LSC 0.006944 5 0 20 67 no 0.333333 2 0.500000 0.006944 1.000000 34.700000 IGS_040 igs ndhJ|ndhK ndhJ-ndhK 50657 50754 0 98 LSC 0.020408 3 0 53 27 no 1.000000 3 1.000000 0.020408 1.000000 52.500000 ndhK gene ndhK ndhK 50755 51504 -1 750 LSC 0.011556 13 0 9 59 no 1.000000 3 1.000000 0.011556 1.000000 51.800000 ndhC gene ndhC ndhC 51495 51857 -1 363 LSC 0.007346 4 0 52 29 no 1.000000 3 1.000000 0.007346 1.000000 45.700000 IGS_042 igs ndhC|trnM-CAT ndhC-trnM-CAT 51858 53728 0 1871 LSC 0.018364 49 99 38 172 no 1.000000 3 1.000000 0.018142 0.960449 62.200000 trnM-CAT tRNA trnM-CAT trnM-CAT 53729 53801 1 73 LSC 0.000000 0 2 46 99 no 0.333333 2 0.500000 0.000000 0.972603 31.000000 IGS_043 igs trnM-CAT|atpE trnM-CAT-atpE 53802 53929 0 128 LSC 0.005848 1 14 119 98 no 1.000000 3 1.000000 0.005848 0.890625 51.100000 atpE gene atpE atpE 53930 54343 -1 414 LSC 0.006441 4 0 28 92 no 1.000000 3 1.000000 0.006441 1.000000 46.100000 atpB gene atpB atpB 54340 55836 -1 1497 LSC 0.008907 20 0 52 27 no 1.000000 3 1.000000 0.008907 1.000000 51.500000 IGS_045 igs atpB|rbcL atpB-rbcL 55837 56630 0 794 LSC 0.017366 20 8 65 30 no 1.000000 3 1.000000 0.016529 0.991184 57.900000 rbcL gene rbcL rbcL 56631 58061 1 1431 LSC 0.008852 19 0 59 2 no 1.000000 3 1.000000 0.008852 1.000000 49.500000 IGS_046 igs rbcL|psaI rbcL-psaI 58062 58977 0 916 LSC 0.027747 38 5 24 29 yes 1.000000 3 1.000000 0.027780 0.996725 63.800000 psaI gene psaI psaI 58978 59088 1 111 LSC 0.012012 2 0 42 3 no 0.333333 2 0.500000 0.012012 1.000000 32.900000 IGS_047 igs psaI|ycf4 psaI-ycf4 59089 59445 0 357 LSC 0.037348 20 1 57 129 no 1.000000 3 1.000000 0.037401 1.000000 67.100000 ycf4 gene ycf4 ycf4 59446 60003 1 558 LSC 0.008363 7 0 98 87 no 1.000000 3 1.000000 0.008363 1.000000 54.700000 IGS_048 igs ycf4|cemA ycf4-cemA 60004 60335 0 332 LSC 0.020202 10 2 96 125 no 1.000000 3 1.000000 0.020202 0.993976 58.800000 cemA gene cemA cemA 60336 61028 1 693 LSC 0.009620 10 0 32 167 no 0.333333 2 0.500000 0.009620 1.000000 39.800000 IGS_049 igs cemA|petA cemA-petA 61029 61267 0 239 LSC 0.008368 3 0 42 25 no 0.333333 2 0.500000 0.008368 1.000000 32.200000 petA gene petA petA 61268 62230 1 963 LSC 0.009000 13 0 7 23 no 1.000000 3 1.000000 0.009000 1.000000 50.000000 IGS_050 igs petA|psbJ petA-psbJ 62231 63148 0 918 LSC 0.016839 21 177 15 15 no 1.000000 3 1.000000 0.016832 0.948802 58.400000 psbJ gene psbJ psbJ 63149 63271 -1 123 LSC 0.005420 1 0 33 17 no 0.333333 2 0.500000 0.005420 1.000000 29.700000 IGS_051 igs psbJ|psbL psbJ-psbL 63272 63396 0 125 LSC 0.016000 3 0 107 300 no 0.333333 2 0.500000 0.016000 1.000000 43.200000 psbL gene psbL psbL 63397 63513 -1 117 LSC 0.000000 0 0 52 300 no 0.000000 1 0.000000 0.000000 1.000000 22.700000 IGS_052 igs psbL|psbF psbL-psbF 63514 63535 0 22 LSC 0.000000 0 0 169 300 no 0.000000 1 0.000000 0.000000 1.000000 31.400000 psbF gene psbF psbF 63536 63655 -1 120 LSC 0.000000 0 0 191 272 no 0.000000 1 0.000000 0.000000 1.000000 33.100000 IGS_053 igs psbF|psbE psbF-psbE 63656 63664 0 9 LSC 0.000000 0 0 300 263 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbE gene psbE psbE 63665 63916 -1 252 LSC 0.000000 0 0 300 11 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_054 igs psbE|petL psbE-petL 63917 65064 0 1148 LSC 0.021308 36 17 300 132 yes 1.000000 3 1.000000 0.020837 0.994774 68.700000 petL gene petL petL 65065 65160 1 96 LSC 0.000000 0 0 2 36 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_055 igs petL|petG petL-petG 65161 65342 0 182 LSC 0.014652 4 0 98 92 no 1.000000 3 1.000000 0.014652 1.000000 53.700000 petG gene petG petG 65343 65456 1 114 LSC 0.005848 1 0 81 16 no 0.333333 2 0.500000 0.005848 1.000000 29.900000 IGS_056 igs petG|trnW-CCA petG-trnW-CCA 65457 65575 0 119 LSC 0.067227 12 0 21 123 yes 1.000000 3 1.000000 0.067227 1.000000 74.100000 trnW-CCA tRNA trnW-CCA trnW-CCA 65576 65649 -1 74 LSC 0.000000 0 0 19 49 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_057 igs trnW-CCA|trnP-TGG trnW-CCA-trnP-TGG 65650 65779 0 130 LSC 0.015385 3 0 93 126 no 1.000000 3 1.000000 0.015385 1.000000 54.300000 trnP-TGG tRNA trnP-TGG trnP-TGG 65780 65853 -1 74 LSC 0.000000 0 0 23 52 no 0.000000 1 0.000000 0.000000 1.000000 20.500000 IGS_058 igs trnP-TGG|psaJ trnP-TGG-psaJ 65854 66240 0 387 LSC 0.021815 12 5 97 181 no 1.000000 3 1.000000 0.021815 0.987080 61.500000 psaJ gene psaJ psaJ 66241 66375 1 135 LSC 0.000000 0 0 2 46 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_059 igs psaJ|rpl33 psaJ-rpl33 66376 66726 0 351 LSC 0.027053 14 6 137 129 no 1.000000 3 1.000000 0.027053 0.982906 67.000000 rpl33 gene rpl33 rpl33 66727 66927 1 201 LSC 0.006633 2 0 23 16 no 1.000000 3 1.000000 0.006633 1.000000 42.900000 IGS_060 igs rpl33|rps18 rpl33-rps18 66928 67212 0 285 LSC 0.019394 8 10 57 40 no 1.000000 3 1.000000 0.019394 0.964912 56.000000 rps18 gene rps18 rps18 67213 67704 1 492 LSC 0.013550 10 0 24 24 no 1.000000 3 1.000000 0.013550 1.000000 51.900000 IGS_061 igs rps18|rpl20 rps18-rpl20 67705 67927 0 223 LSC 0.014948 5 0 6 5 no 1.000000 3 1.000000 0.014948 1.000000 47.400000 rpl20 gene rpl20 rpl20 67928 68287 -1 360 LSC 0.014815 8 0 35 55 no 1.000000 3 1.000000 0.014815 1.000000 50.800000 IGS_062 igs rpl20|rps12 rpl20-rps12 68288 68980 0 693 LSC 0.013566 14 5 42 232 no 1.000000 3 1.000000 0.013566 0.992785 56.200000 rps12_part1 gene rps12 rps12 68981 69103 1 123 LSC 0.000000 0 0 11 109 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_063 igs rps12|clpP rps12-clpP 69104 69234 0 131 LSC 0.015267 3 0 134 9 no 1.000000 3 1.000000 0.015267 1.000000 47.900000 clpP gene clpP clpP 69235 69885 -1 651 LSC 0.006144 6 0 0 81 no 0.333333 2 0.500000 0.006144 1.000000 35.200000 IGS_064 igs clpP|psbB clpP-psbB 69886 70403 0 518 LSC 0.010296 8 0 161 20 no 1.000000 3 1.000000 0.010296 1.000000 50.100000 psbB gene psbB psbB 70404 71930 1 1527 LSC 0.009605 22 0 123 0 no 1.000000 3 1.000000 0.009605 1.000000 49.800000 IGS_065 igs psbB|psbT psbB-psbT 71931 72094 0 164 LSC 0.018293 4 0 111 135 no 1.000000 3 1.000000 0.018293 1.000000 57.100000 psbT gene psbT psbT 72095 72196 1 102 LSC 0.000000 0 0 48 33 no 0.000000 1 0.000000 0.000000 1.000000 21.200000 IGS_066 igs psbT|psbN psbT-psbN 72197 72252 0 56 LSC 0.070513 5 4 150 288 yes 1.000000 3 1.000000 0.070513 0.928571 86.300000 psbN gene psbN psbN 72253 72384 -1 132 LSC 0.000000 0 0 13 156 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_067 igs psbN|psbH psbN-psbH 72385 72487 0 103 LSC 0.000000 0 0 145 53 no 0.000000 1 0.000000 0.000000 1.000000 22.700000 psbH gene psbH psbH 72488 72709 1 222 LSC 0.009009 3 0 248 294 no 1.000000 3 1.000000 0.009009 1.000000 58.200000 IGS_068 igs psbH|petB psbH-petB 72710 73574 0 865 LSC 0.008013 10 33 108 42 no 1.000000 3 1.000000 0.008013 0.961850 55.400000 petB gene petB petB 73575 74273 1 699 LSC 0.009537 10 0 3 14 no 1.000000 3 1.000000 0.009537 1.000000 50.100000 IGS_069 igs petB|petD petB-petD 74274 75225 0 952 LSC 0.013475 19 20 42 74 no 1.000000 3 1.000000 0.013533 0.987395 57.600000 petD gene petD petD 75226 75702 1 477 LSC 0.002795 2 0 122 6 no 0.333333 2 0.500000 0.002795 1.000000 30.900000 IGS_070 igs petD|rpoA petD-rpoA 75703 75919 0 217 LSC 0.039939 13 0 300 65 no 1.000000 3 1.000000 0.039939 1.000000 67.800000 rpoA gene rpoA rpoA 75920 76939 -1 1020 LSC 0.018954 29 0 21 6 no 1.000000 3 1.000000 0.018954 1.000000 56.300000 IGS_071 igs rpoA|rps11 rpoA-rps11 76940 77003 0 64 LSC 0.052083 5 0 11 117 yes 1.000000 3 1.000000 0.052083 1.000000 70.600000 rps11 gene rps11 rps11 77004 77435 -1 432 LSC 0.012346 8 0 5 80 no 1.000000 3 1.000000 0.012346 1.000000 48.500000 IGS_072 igs rps11|rpl36 rps11-rpl36 77436 77606 0 171 LSC 0.019493 5 0 24 51 no 0.333333 2 0.500000 0.019493 1.000000 39.200000 rpl36 gene rpl36 rpl36 77607 77720 -1 114 LSC 0.005848 1 0 46 10 no 0.333333 2 0.500000 0.005848 1.000000 29.500000 IGS_073 igs rpl36|infA rpl36-infA 77721 77821 0 101 LSC 0.033003 5 0 62 12 no 1.000000 3 1.000000 0.033003 1.000000 59.400000 infA gene infA infA 77822 78145 -1 324 LSC 0.018519 9 0 11 12 no 1.000000 3 1.000000 0.018519 1.000000 50.600000 IGS_074 igs infA|rps8 infA-rps8 78146 78224 0 79 LSC 0.025316 3 0 35 173 no 1.000000 3 1.000000 0.025316 1.000000 56.300000 rps8 gene rps8 rps8 78225 78635 -1 411 LSC 0.009732 6 0 45 10 no 0.333333 2 0.500000 0.009732 1.000000 34.300000 IGS_075 igs rps8|rpl14 rps8-rpl14 78636 78774 0 139 LSC 0.023981 5 0 21 33 no 1.000000 3 1.000000 0.023981 1.000000 54.400000 rpl14 gene rpl14 rpl14 78775 79146 -1 372 LSC 0.008961 5 0 9 30 no 1.000000 3 1.000000 0.008961 1.000000 45.400000 IGS_076 igs rpl14|rpl16 rpl14-rpl16 79147 79254 0 108 LSC 0.055556 9 0 25 114 yes 1.000000 3 1.000000 0.055556 1.000000 72.300000 rpl16 gene rpl16 rpl16 79255 79617 -1 363 LSC 0.009183 5 0 4 59 no 0.333333 2 0.500000 0.009183 1.000000 32.500000 IGS_077 igs rpl16|rps3 rpl16-rps3 79618 81006 0 1389 LSC 0.024189 43 158 17 30 no 1.000000 3 1.000000 0.021750 0.902808 62.600000 rps3 gene rps3 rps3 81007 81681 -1 675 LSC 0.009383 9 0 8 27 no 1.000000 3 1.000000 0.009383 1.000000 50.200000 IGS_078 igs rps3|rpl22 rps3-rpl22 81682 81739 0 58 IRb 0.035088 3 1 148 90 no 0.333333 2 0.500000 0.035088 0.982759 55.600000 rpl22 gene rpl22 rpl22 81740 82189 -1 450 IRb 0.013333 9 0 9 22 no 1.000000 3 1.000000 0.013333 1.000000 49.800000 IGS_079 igs rpl22|rps19 rpl22-rps19 82190 82274 0 85 IRb 0.023529 3 0 17 84 no 1.000000 3 1.000000 0.023529 1.000000 53.800000 rps19 gene rps19 rps19 82275 82556 -1 282 IRb 0.004728 2 0 31 13 no 0.333333 2 0.500000 0.004728 1.000000 29.000000 IGS_080 igs rps19|trnH-GTG rps19-trnH-GTG 82557 82688 0 132 IRb 0.010101 2 0 17 144 no 0.333333 2 0.500000 0.010101 1.000000 32.700000 trnH-GTG tRNA trnH-GTG trnH-GTG 82689 82762 1 74 IRb 0.000000 0 0 70 70 no 0.000000 1 0.000000 0.000000 1.000000 24.000000 IGS_081 igs trnH-GTG|rpl2 trnH-GTG-rpl2 82763 82817 0 55 IRb 0.000000 0 0 144 15 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 rpl2 gene rpl2 rpl2 82818 84314 -1 1497 IRb 0.003563 8 0 199 270 no 1.000000 3 1.000000 0.003563 1.000000 60.900000 IGS_082 igs rpl2|rpl23 rpl2-rpl23 84315 84320 0 6 IRb 0.000000 0 0 182 264 no 0.000000 1 0.000000 NA 1.000000 32.400000 rpl23 gene rpl23 rpl23 84321 84602 -1 282 IRb 0.002364 1 0 188 109 no 0.333333 2 0.500000 0.002364 1.000000 34.700000 IGS_083 igs rpl23|trnI-CAT rpl23-trnI-CAT 84603 84776 0 174 IRb 0.003831 1 0 17 266 no 0.333333 2 0.500000 0.003831 1.000000 28.700000 trnI-CAT tRNA trnI-CAT trnI-CAT 84777 84850 -1 74 IRb 0.000000 0 0 64 192 no 0.000000 1 0.000000 0.000000 1.000000 23.500000 IGS_084 igs trnI-CAT|trnL-CAA trnI-CAT-trnL-CAA 84851 88324 0 3474 IRb 0.004678 23 202 138 175 no 1.000000 3 1.000000 0.004682 0.943581 57.500000 trnL-CAA tRNA trnL-CAA trnL-CAA 88325 88405 -1 81 IRb 0.000000 0 0 20 94 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_085 igs trnL-CAA|ndhB trnL-CAA-ndhB 88406 88976 0 571 IRb 0.002360 2 6 101 300 no 1.000000 3 1.000000 0.002360 0.989492 53.200000 ndhB gene ndhB ndhB 88977 91221 -1 2245 IRb 0.000594 2 0 300 43 no 0.333333 2 0.500000 0.000594 1.000000 33.300000 IGS_086 igs ndhB|rps7 ndhB-rps7 91222 91520 0 299 IRb 0.004459 2 0 300 300 no 0.333333 2 0.500000 0.004459 1.000000 42.800000 rps7 gene rps7 rps7 91521 91991 -1 471 IRb 0.000000 0 0 232 285 no 0.000000 1 0.000000 0.000000 1.000000 37.300000 IGS_087 igs rps7|rps12 rps7-rps12 91992 92607 0 616 IRb 0.001082 1 0 300 300 no 0.333333 2 0.500000 0.001082 1.000000 46.900000 rps12_part2 gene rps12 rps12 92608 92850 -1 243 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_088 igs rps12|trnV-GAC rps12-trnV-GAC 92851 94577 0 1727 IRb 0.002316 6 0 300 98 no 1.000000 3 1.000000 0.002316 1.000000 52.100000 trnV-GAC tRNA trnV-GAC trnV-GAC 94578 94649 1 72 IRb 0.000000 0 0 300 26 no 0.000000 1 0.000000 0.000000 1.000000 20.700000 IGS_089 igs trnV-GAC|rrn16S trnV-GAC-rrn16S 94650 94878 0 229 IRb 0.002911 1 0 300 300 no 0.333333 2 0.500000 0.002911 1.000000 41.900000 rrn16S rRNA rrn16S rrn16S 94879 96370 -1 1492 IRb 0.000447 1 0 202 206 no 0.333333 2 0.500000 0.000447 1.000000 46.500000 IGS_090 igs rrn16S|rrn4.5S rrn16S-rrn4.5S 96371 101777 0 5407 IRb 0.001850 15 1 300 300 no 1.000000 3 1.000000 0.001850 0.999815 53.700000 rrn4.5S rRNA rrn4.5S rrn4.5S 101778 101872 -1 95 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_091 igs rrn4.5S|rrn5S rrn4.5S-rrn5S 101873 102099 0 227 IRb 0.000000 0 0 300 147 no 0.000000 1 0.000000 0.000000 1.000000 29.800000 rrn5S rRNA rrn5S rrn5S 102100 102220 1 121 IRb 0.000000 0 0 300 26 no 0.000000 1 0.000000 0.000000 1.000000 20.700000 IGS_092 igs rrn5S|trnR-ACG rrn5S-trnR-ACG 102221 102472 0 252 IRb 0.010582 4 0 300 95 no 1.000000 3 1.000000 0.010582 1.000000 51.400000 trnR-ACG tRNA trnR-ACG trnR-ACG 102473 102546 1 74 IRb 0.000000 0 0 13 21 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_093 igs trnR-ACG|trnN-GTT trnR-ACG-trnN-GTT 102547 102799 0 253 IRb 0.002635 1 0 87 213 no 0.333333 2 0.500000 0.002635 1.000000 33.200000 trnN-GTT tRNA trnN-GTT trnN-GTT 102800 102871 -1 72 IRb 0.000000 0 0 231 141 no 0.000000 1 0.000000 0.000000 1.000000 29.300000 IGS_094 igs trnN-GTT|rps15 trnN-GTT-rps15 102872 104464 0 1593 IRb 0.005440 13 0 300 27 no 1.000000 3 1.000000 0.005440 1.000000 49.000000 rps15 gene rps15 rps15 104465 104701 1 237 IRb 0.005626 2 0 59 17 no 0.333333 2 0.500000 0.005626 1.000000 29.900000 IGS_095 igs rps15|ndhF rps15-ndhF 104702 104807 0 106 IRb 0.006289 1 0 122 86 no 0.333333 2 0.500000 0.006289 1.000000 35.500000 ndhF gene ndhF ndhF 104808 107024 -1 2217 SSC 0.012630 42 0 88 15 no 1.000000 3 1.000000 0.012630 1.000000 51.400000 IGS_096 igs ndhF|rpl32 ndhF-rpl32 107025 107950 0 926 SSC 0.039100 48 101 3 110 yes 1.000000 3 1.000000 0.038002 0.911447 71.100000 rpl32 gene rpl32 rpl32 107951 108133 1 183 SSC 0.014898 4 4 2 24 no 1.000000 3 1.000000 0.014898 0.978142 49.100000 IGS_097 igs rpl32|trnL-TAG rpl32-trnL-TAG 108134 108664 0 531 SSC 0.021795 17 11 9 48 no 1.000000 3 1.000000 0.021795 0.979284 58.700000 trnL-TAG tRNA trnL-TAG trnL-TAG 108665 108744 1 80 SSC 0.008333 1 0 35 32 no 0.333333 2 0.500000 0.008333 1.000000 32.700000 IGS_098 igs trnL-TAG|ccsA trnL-TAG-ccsA 108745 108821 0 77 SSC 0.025974 3 0 31 67 no 0.333333 2 0.500000 0.025974 1.000000 43.900000 ccsA gene ccsA ccsA 108822 109790 1 969 SSC 0.015136 22 0 2 17 no 1.000000 3 1.000000 0.015136 1.000000 53.500000 IGS_099 igs ccsA|ndhD ccsA-ndhD 109791 109996 0 206 SSC 0.082927 25 2 69 0 yes 1.000000 3 1.000000 0.079898 0.995146 73.500000 ndhD gene ndhD ndhD 109997 111499 -1 1503 SSC 0.014194 32 0 22 86 yes 1.000000 3 1.000000 0.014194 1.000000 54.400000 IGS_100 igs ndhD|psaC ndhD-psaC 111500 111613 0 114 SSC 0.005848 1 0 92 48 no 0.333333 2 0.500000 0.005848 1.000000 32.300000 psaC gene psaC psaC 111614 111859 -1 246 SSC 0.005420 2 0 27 1 no 1.000000 3 1.000000 0.005420 1.000000 41.000000 IGS_101 igs psaC|ndhE psaC-ndhE 111860 112338 0 479 SSC 0.018678 13 15 170 42 no 1.000000 3 1.000000 0.018678 0.968685 59.000000 ndhE gene ndhE ndhE 112339 112644 -1 306 SSC 0.013072 6 0 24 3 no 1.000000 3 1.000000 0.013072 1.000000 46.200000 IGS_102 igs ndhE|ndhG ndhE-ndhG 112645 112858 0 214 SSC 0.024922 8 0 2 129 no 0.333333 2 0.500000 0.024922 1.000000 41.000000 ndhG gene ndhG ndhG 112859 113389 -1 531 SSC 0.011299 9 0 35 43 no 0.333333 2 0.500000 0.011299 1.000000 39.600000 IGS_103 igs ndhG|ndhI ndhG-ndhI 113390 113589 0 200 SSC 0.021739 6 16 26 42 no 0.333333 2 0.500000 0.021739 0.920000 44.100000 ndhI gene ndhI ndhI 113590 114132 -1 543 SSC 0.006139 5 0 8 3 no 1.000000 3 1.000000 0.006139 1.000000 46.700000 IGS_104 igs ndhI|ndhA ndhI-ndhA 114133 114270 0 138 SSC 0.014815 3 32 47 24 no 1.000000 3 1.000000 0.017517 0.978261 52.000000 ndhA gene ndhA ndhA 114271 116384 -1 2114 SSC 0.014822 46 1 58 149 no 1.000000 3 1.000000 0.014826 1.000000 56.300000 IGS_105 igs ndhA|ndhH ndhA-ndhH 116385 116385 0 1 SSC 0.000000 0 0 20 148 no 0.000000 1 0.000000 NA 1.000000 20.200000 ndhH gene ndhH ndhH 116386 117567 -1 1182 SSC 0.014100 25 0 21 116 no 1.000000 3 1.000000 0.014100 1.000000 54.300000 IGS_106 igs ndhH|rps15 ndhH-rps15 117568 117701 0 134 IRa 0.004975 1 0 11 122 no 0.333333 2 0.500000 0.004975 1.000000 29.000000 rps15 gene rps15 rps15 117702 117938 -1 237 IRa 0.008439 3 0 17 59 no 1.000000 3 1.000000 0.008439 1.000000 44.200000 IGS_107 igs rps15|trnN-GTT rps15-trnN-GTT 117939 119531 0 1593 IRa 0.005022 12 0 27 300 no 1.000000 3 1.000000 0.005022 1.000000 48.800000 trnN-GTT tRNA trnN-GTT trnN-GTT 119532 119603 1 72 IRa 0.000000 0 0 141 231 no 0.000000 1 0.000000 0.000000 1.000000 29.300000 IGS_108 igs trnN-GTT|trnR-ACG trnN-GTT-trnR-ACG 119604 119856 0 253 IRa 0.002635 1 0 213 87 no 0.333333 2 0.500000 0.002635 1.000000 33.200000 trnR-ACG tRNA trnR-ACG trnR-ACG 119857 119930 -1 74 IRa 0.000000 0 0 21 13 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_109 igs trnR-ACG|rrn5S trnR-ACG-rrn5S 119931 120182 0 252 IRa 0.010582 4 0 95 300 no 0.333333 2 0.500000 0.010582 1.000000 38.900000 rrn5S rRNA rrn5S rrn5S 120183 120303 -1 121 IRa 0.000000 0 0 26 300 no 0.000000 1 0.000000 0.000000 1.000000 20.700000 IGS_110 igs rrn5S|rrn4.5S rrn5S-rrn4.5S 120304 120530 0 227 IRa 0.000000 0 0 147 300 no 0.000000 1 0.000000 0.000000 1.000000 29.800000 rrn4.5S rRNA rrn4.5S rrn4.5S 120531 120625 1 95 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_111 igs rrn4.5S|rrn23S rrn4.5S-rrn23S 120626 120720 0 95 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn23S rRNA rrn23S rrn23S 120721 123609 1 2889 IRa 0.000693 3 1 300 76 no 0.333333 2 0.500000 0.000693 0.999654 34.500000 IGS_112 igs rrn23S|rrn16S rrn23S-rrn16S 123610 126032 0 2423 IRa 0.003577 13 0 165 300 no 1.000000 3 1.000000 0.003577 1.000000 56.500000 rrn16S rRNA rrn16S rrn16S 126033 127524 1 1492 IRa 0.000447 1 0 206 202 no 0.333333 2 0.500000 0.000447 1.000000 46.500000 IGS_113 igs rrn16S|trnV-GAC rrn16S-trnV-GAC 127525 127753 0 229 IRa 0.002911 1 0 300 300 no 0.333333 2 0.500000 0.002911 1.000000 41.900000 trnV-GAC tRNA trnV-GAC trnV-GAC 127754 127825 -1 72 IRa 0.000000 0 0 26 300 no 0.000000 1 0.000000 0.000000 1.000000 20.700000 IGS_114 igs trnV-GAC|rps12 trnV-GAC-rps12 127826 129552 0 1727 IRa 0.002316 6 0 98 300 no 1.000000 3 1.000000 0.002316 1.000000 52.100000 rps12_part2 gene rps12 rps12 129553 129795 1 243 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_115 igs rps12|rps7 rps12-rps7 129796 130411 0 616 IRa 0.001082 1 0 300 300 no 0.333333 2 0.500000 0.001082 1.000000 46.900000 rps7 gene rps7 rps7 130412 130882 1 471 IRa 0.000000 0 0 285 232 no 0.000000 1 0.000000 0.000000 1.000000 37.300000 IGS_116 igs rps7|ndhB rps7-ndhB 130883 131181 0 299 IRa 0.004459 2 0 300 300 no 0.333333 2 0.500000 0.004459 1.000000 42.800000 ndhB gene ndhB ndhB 131182 133426 1 2245 IRa 0.000594 2 12 43 300 no 1.000000 3 1.000000 0.000596 1.000000 46.400000 IGS_117 igs ndhB|trnL-CAA ndhB-trnL-CAA 133427 133997 0 571 IRa 0.002360 2 6 300 101 no 1.000000 3 1.000000 0.002360 0.989492 53.200000 trnL-CAA tRNA trnL-CAA trnL-CAA 133998 134078 1 81 IRa 0.000000 0 0 94 20 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_118 igs trnL-CAA|trnI-CAT trnL-CAA-trnI-CAT 134079 137552 0 3474 IRa 0.004779 23 203 175 138 no 1.000000 3 1.000000 0.004581 0.943581 57.600000 trnI-CAT tRNA trnI-CAT trnI-CAT 137553 137626 1 74 IRa 0.000000 0 0 192 64 no 0.000000 1 0.000000 0.000000 1.000000 23.500000 IGS_119 igs trnI-CAT|rpl23 trnI-CAT-rpl23 137627 137800 0 174 IRa 0.003831 1 0 266 17 no 0.333333 2 0.500000 0.003831 1.000000 28.700000 rpl23 gene rpl23 rpl23 137801 138082 1 282 IRa 0.002364 1 0 109 188 no 0.333333 2 0.500000 0.002364 1.000000 34.700000 IGS_120 igs rpl23|rpl2 rpl23-rpl2 138083 138088 0 6 IRa 0.000000 0 0 264 182 no 0.000000 1 0.000000 NA 1.000000 32.400000 rpl2 gene rpl2 rpl2 138089 139585 1 1497 IRa 0.003563 8 0 270 199 no 1.000000 3 1.000000 0.003563 1.000000 60.900000 IGS_121 igs rpl2|trnH-GTG rpl2-trnH-GTG 139586 139640 0 55 IRa 0.000000 0 0 15 144 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 trnH-GTG tRNA trnH-GTG trnH-GTG 139641 139714 -1 74 IRa 0.000000 0 0 70 70 no 0.000000 1 0.000000 0.000000 1.000000 24.000000 IGS_122 igs trnH-GTG|rps19 trnH-GTG-rps19 139715 139846 0 132 IRa 0.010101 2 0 144 17 no 0.333333 2 0.500000 0.010101 1.000000 32.700000 rps19 gene rps19 rps19 139847 140128 1 282 IRa 0.004728 2 0 13 300 no 0.333333 2 0.500000 0.004728 1.000000 29.000000 IGS_123 igs rps19|rpl22 rps19-rpl22 140129 140213 0 85 IRa 0.000000 0 59 84 300 no 0.333333 2 0.500000 0.000000 0.305882 22.600000 rpl22 gene rpl22 rpl22 140214 140663 1 450 IRa NA 0 450 169 36 no 0.333333 2 0.500000 NA 0.000000 18.300000 IGS_124 igs rpl22|psbA rpl22-psbA 140664 80 0 126 LSC 0.042105 6 31 300 147 no 1.000000 3 1.000000 0.042105 0.753968 71.500000