Hotspot

trnT-UGU-trnL-UAA

LSC · 47279-48116 · 838 bp

Back to Allomorphia

Pi 0.0156
MarkerSeek score 68.90
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 881-890 bp 1.0 83.7
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 889-898 bp 1.0 83.1
trnT-UGU-trnL-UAA_p3 TAGACAAAAGCCGGCTATCG ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 932-941 bp 1.0 82.7
trnT-UGU-trnL-UAA_p4 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 913-922 bp 1.0 82.7
trnT-UGU-trnL-UAA_p5 TAGACAAAAGCCGGCTATCG TAGCGTCTACCAATTTCGCC 50.0 50.0 57.8 58.1 940-949 bp 1.0 82.2