primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 CAATCCACTGCCTTGATCCA AGCTCCATCTACAAATGGGT 20 20 50.0 45.0 57.9 56.2 0.0 3.2 1.941039 287 459 220-449 1.000000 76.5 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 AATCCACTGCCTTGATCCAC AGCTCCATCTACAAATGGGT 20 20 50.0 45.0 57.9 56.2 0.0 3.2 1.942547 287 459 219-448 1.000000 76.5 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 ACAATCCACTGCCTTGATCC AGCTCCATCTACAAATGGGT 20 20 50.0 45.0 57.9 56.2 0.0 3.2 1.942547 287 459 221-450 1.000000 76.5 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 GATCCACTTGGCTACATCCG AGCTCCATCTACAAATGGGT 20 20 55.0 45.0 58.1 56.2 0.0 3.2 1.936678 287 459 206-435 0.941176 74.2 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACTTGGCTACATCCG AAGCTCCATCTACAAATGGGT 20 21 55.0 42.9 58.1 57.0 0.0 3.2 2.158020 287 459 207-436 0.941176 72.4 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AAAGCCGAGTACTCTACCGT GGCGGAGGTTTTTAAGTAG 20 19 50.0 47.4 58.2 53.4 20.3 0.0 5.776233 4273 5024 566-951 1.000000 52.0 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAGCCGAGTACTCTACCGTT GGCGGAGGTTTTTAAGTAG 20 19 50.0 47.4 58.2 53.4 20.3 0.0 5.776233 4273 5024 565-950 1.000000 52.0 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 TCCTAGCCGCACTTAAAAGC GGCGGAGGTTTTTAAGTAG 20 19 50.0 47.4 58.3 53.4 0.0 0.0 5.873651 4273 5024 581-966 1.000000 52.0 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CCGCACTTAAAAGCCGAGTA GGCGGAGGTTTTTAAGTAG 20 19 50.0 47.4 58.3 53.4 5.3 0.0 5.890619 4273 5024 575-960 1.000000 52.0 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 TACCGTTGAGTTAGCAACCC GGCGGAGGTTTTTAAGTAG 20 19 50.0 47.4 57.5 53.4 0.0 0.0 6.068570 4273 5024 552-937 1.000000 52.0 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 CGCGCGATACACTTTGAATC TACAGCAGCTTGCCAAATGA 20 20 50.0 45.0 58.0 58.1 28.9 0.0 0.099831 6003 7411 2385-2385 0.117647 43.9 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 GCGCGATACACTTTGAATCG TACAGCAGCTTGCCAAATGA 20 20 50.0 45.0 58.0 58.1 12.1 0.0 0.099831 6003 7411 2384-2384 0.117647 43.9 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 TGCTTTCTACCACAGCGTTT TACAGCAGCTTGCCAAATGA 20 20 45.0 45.0 58.0 58.1 0.0 0.0 0.129863 6003 7411 2044-2044 0.117647 43.7 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 TTGCTTTCTACCACAGCGTT TACAGCAGCTTGCCAAATGA 20 20 45.0 45.0 58.0 58.1 0.0 0.0 0.129863 6003 7411 2045-2045 0.117647 43.7 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGTTTTCTCCTCGTACGGC TACAGCAGCTTGCCAAATGA 20 20 50.0 45.0 57.9 58.1 16.5 0.0 0.167635 6003 7411 2745-2745 0.117647 43.4 atpH-atpI_p1 atpH-atpI 1 ATAACGGAAGCGGCAGAAAT TTCTAATTGGTCAGGAGCGC 20 20 45.0 50.0 58.0 58.0 1.4 0.0 0.062562 13842 14978 1279-1631 1.000000 91.5 atpH-atpI_p2 atpH-atpI 2 ATAACGGAAGCGGCAGAAAT CTAATTGGTCAGGAGCGCTT 20 20 45.0 50.0 58.0 58.0 1.4 13.3 0.068225 13842 14978 1277-1629 1.000000 91.5 atpH-atpI_p3 atpH-atpI 3 ATAACGGAAGCGGCAGAAAT TGCTTTGGCTTTACTCACGT 20 20 45.0 45.0 58.0 58.0 1.4 0.0 0.076593 13842 14978 1186-1538 1.000000 91.4 atpH-atpI_p4 atpH-atpI 4 CTCGCGATACCTTCTACAGC TTCTAATTGGTCAGGAGCGC 20 20 55.0 50.0 58.0 58.0 10.4 0.0 0.063502 13842 14978 1369-1721 0.941176 89.1 atpH-atpI_p5 atpH-atpI 5 CTCGCGATACCTTCTACAGC CTAATTGGTCAGGAGCGCTT 20 20 55.0 50.0 58.0 58.0 10.4 13.3 0.069165 13842 14978 1367-1719 0.941176 89.1 rps2-rpoC2_p1 rps2-rpoC2 1 AATGAACTCCGGCCTTCATC TTGGGGGTTCTTGATTGGTG 20 20 50.0 50.0 58.0 58.0 20.5 0.0 0.052365 16696 16926 889-922 1.000000 89.8 rps2-rpoC2_p2 rps2-rpoC2 2 AACATAATGACACCGAGCCC TTGGGGGTTCTTGATTGGTG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.046629 16696 16926 1119-1152 1.000000 89.2 rps2-rpoC2_p3 rps2-rpoC2 3 CCGCATCTCTTTTCGGAAGA TTGGGGGTTCTTGATTGGTG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.018388 16696 16926 1246-1279 0.882353 81.6 rps2-rpoC2_p4 rps2-rpoC2 4 CCGCATCTCTTTTCGGAAGA GAGGGTTGGCACGAATGTAT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.048532 16696 16926 1287-1320 0.882353 81.3 rps2-rpoC2_p5 rps2-rpoC2 5 CCGCATCTCTTTTCGGAAGA GATTCGAGGGATTGGTGCAT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.037273 16696 16926 828-834 0.176471 47.7 trnC-GCA-petN_p1 trnC-GCA-petN 1 CGATATGGCCGAGTGGTAAG AGCCCAAGCGAGACTTACTA 20 20 55.0 50.0 57.9 58.2 0.0 0.0 0.217341 28604 29239 455-813 1.000000 90.3 trnC-GCA-petN_p2 trnC-GCA-petN 2 TTTCCCCAGTTCAAATCCGG AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.233476 28604 29239 415-773 1.000000 90.1 trnC-GCA-petN_p3 trnC-GCA-petN 3 CGATATGGCCGAGTGGTAAG AGAGTCCACTTCTTCCCCAT 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.416855 28604 29239 516-874 1.000000 88.7 trnC-GCA-petN_p4 trnC-GCA-petN 4 TTTCCCCAGTTCAAATCCGG AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.1 57.6 0.0 0.0 0.432990 28604 29239 476-834 1.000000 88.5 trnC-GCA-petN_p5 trnC-GCA-petN 5 GGGGGACTGCAAATCCTTTT AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.4 58.2 14.7 0.0 0.506839 28604 29239 433-791 1.000000 87.9 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 AAATGCAAGAATATTTACTTCCA GTTCGAGCCCCGTCAGTC 23 18 26.1 66.7 52.7 60.1 0.0 0.0 12.465267 30564 31184 620-752 1.000000 52.0 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 AATGCAAGAATATTTACTTCCAT GTTCGAGCCCCGTCAGTC 23 18 26.1 66.7 52.4 60.1 0.0 0.0 12.683110 30564 31184 619-751 1.000000 52.0 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 AAATGCAAGAATATTTACTTCCAT GTTCGAGCCCCGTCAGTC 24 18 25.0 66.7 53.3 60.1 0.0 0.0 12.846628 30564 31184 620-752 1.000000 52.0 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 AAATGCAAGAATATTTACTTCCA GAGCACCGCCCTGTCAAG 23 18 26.1 66.7 52.7 60.7 0.0 0.0 13.083164 30564 31184 651-783 1.000000 52.0 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 AAATGCAAGAATATTTACTTCCA GCCCTGTCAAGGCGGAAG 23 18 26.1 66.7 52.7 60.7 0.0 0.0 13.087091 30564 31184 644-776 1.000000 52.0 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 GTGCTCTGACCGATTGAACT GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.092025 31613 32337 1050-1450 1.000000 91.3 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 CGTTGCCTCCTTGAAAGAGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.175803 31613 32337 717-1123 1.000000 90.6 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 GTGCTCTGACCGATTGAACT CACGAAGCTGCGATCTGATA 20 20 50.0 50.0 57.9 57.9 0.0 24.0 0.211516 31613 32337 1674-2136 1.000000 90.3 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 GTGCTCTGACCGATTGAACT CCGATGACTTACGCCTTACC 20 20 50.0 55.0 57.9 58.2 0.0 0.0 0.236958 31613 32337 1047-1447 1.000000 90.1 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 GTGCTCTGACCGATTGAACT TGGTGATTCCAGAGACGACT 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.161323 31613 32337 1246-1620 0.941176 88.4 ycf3-trnS-GGA_p1 ycf3-trnS-GGA 1 CATTTATCCGCGATCTAGGCA ACGGAAAGAGAGGGATTCGA 21 20 47.6 50.0 58.0 58.2 8.2 0.0 1.191833 45325 46201 375-1005 1.000000 82.5 ycf3-trnS-GGA_p2 ycf3-trnS-GGA 2 CATTTATCCGCGATCTAGGCA TTCCAATGCTACGCCTTCAA 21 20 47.6 45.0 58.0 57.8 8.2 0.0 1.233148 45325 46201 325-955 1.000000 82.1 ycf3-trnS-GGA_p3 ycf3-trnS-GGA 3 CATTTATCCGCGATCTAGGCA AGTTCCAATGCTACGCCTTC 21 20 47.6 50.0 58.0 58.3 8.2 0.0 1.301418 45325 46201 327-957 1.000000 81.6 ycf3-trnS-GGA_p4 ycf3-trnS-GGA 4 CATTTATCCGCGATCTAGGCA CCCTCGGTAAACAAAAGCCT 21 20 47.6 50.0 58.0 58.1 8.2 0.0 1.134847 45325 46201 354-984 0.941176 80.6 ycf3-trnS-GGA_p5 ycf3-trnS-GGA 5 CATTTATCCGCGATCTAGGCA ACCCTCGGTAAACAAAAGCC 21 20 47.6 50.0 58.0 58.4 8.2 0.0 1.427808 45325 46201 355-985 0.941176 78.2 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 GGGATAGCTCAGCTGGTAGA TGGATAGGATGGCCTTTACG 20 20 55.0 50.0 58.0 56.8 10.3 3.3 1.224095 49408 49793 518-543 1.000000 82.0 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 GGGATAGCTCAGCTGGTAGA GGATAGGATGGCCTTTACGT 20 20 55.0 50.0 58.0 56.8 10.3 3.3 1.226313 49408 49793 517-542 1.000000 82.0 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 CCTCGTGTCACCAGTTCAAA TGGATAGGATGGCCTTTACG 20 20 50.0 50.0 58.1 56.8 0.0 3.3 1.273485 49408 49793 482-507 1.000000 81.8 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 CCTCGTGTCACCAGTTCAAA GGATAGGATGGCCTTTACGT 20 20 50.0 50.0 58.1 56.8 0.0 3.3 1.275704 49408 49793 481-506 1.000000 81.8 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 CTGGTAGAGCAGAGGACTGA TGGATAGGATGGCCTTTACG 20 20 55.0 50.0 57.9 56.8 2.5 3.3 1.357888 49408 49793 506-531 1.000000 81.0 rbcL-accD_p1 rbcL-accD 1 TGAATTTCAAGCAATGGATACT ATCGAACCACCATCTTTCCA 22 20 31.8 45.0 54.0 56.8 0.0 0.0 7.127817 57647 58253 646-693 0.941176 48.9 rbcL-accD_p2 rbcL-accD 2 TGAATTTCAAGCAATGGATACT TCGAACCACCATCTTTCCAT 22 20 31.8 45.0 54.0 56.8 0.0 0.0 7.127817 57647 58253 645-692 0.941176 48.9 rbcL-accD_p3 rbcL-accD 3 TGAATTTCAAGCAATGGATACTT ATCGAACCACCATCTTTCCA 23 20 30.4 45.0 54.8 56.8 0.0 0.0 7.329778 57647 58253 646-693 0.941176 48.9 rbcL-accD_p4 rbcL-accD 4 TGAATTTCAAGCAATGGATACTT TCGAACCACCATCTTTCCAT 23 20 30.4 45.0 54.8 56.8 0.0 0.0 7.329778 57647 58253 645-692 0.941176 48.9 rbcL-accD_p5 rbcL-accD 5 TTGAATTTCAAGCAATGGATACT TCGAACCACCATCTTTCCAT 23 20 30.4 45.0 54.8 56.8 7.7 0.0 7.329778 57647 58253 646-693 0.941176 48.9 petA-psbJ_p1 petA-psbJ 1 CAGGGCCAGAACTTCTTGTT AACTGGCCGTTTTGATCCTT 20 20 50.0 45.0 58.0 58.0 6.2 0.0 0.017741 63722 64692 1605-1804 1.000000 91.9 petA-psbJ_p2 petA-psbJ 2 CAGGGCCAGAACTTCTTGTT ACTGGCCGTTTTGATCCTTT 20 20 50.0 45.0 58.0 58.0 6.2 0.0 0.017741 63722 64692 1604-1803 1.000000 91.9 petA-psbJ_p3 petA-psbJ 3 CGGATTTGGTCAGGGAGATG AACTGGCCGTTTTGATCCTT 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.045582 63722 64692 1529-1728 0.882353 86.9 petA-psbJ_p4 petA-psbJ 4 CGGATTTGGTCAGGGAGATG ACTGGCCGTTTTGATCCTTT 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.045582 63722 64692 1528-1727 0.882353 86.9 petA-psbJ_p5 petA-psbJ 5 CAGGGCCAGAACTTCTTGTT TGCGGGTTGGTTATTTGTCA 20 20 50.0 45.0 58.0 58.0 6.2 0.0 0.030457 63722 64692 1884-1884 0.117647 44.5 ycf2-trnL-CAA_p1 ycf2-trnL-CAA 1 CAGCCCTTTGTCTCTGTGTT AAATGGTAGACACGCGAGAC 20 20 50.0 50.0 58.0 58.0 0.0 15.9 0.034958 93192 93857 591-1167 0.588235 70.4 ycf2-trnL-CAA_p2 ycf2-trnL-CAA 2 CAGCCCTTTGTCTCTGTGTT TGAAATGGTAGACACGCGAG 20 20 50.0 50.0 58.0 58.0 0.0 15.9 0.036329 93192 93857 593-1169 0.588235 70.4 ycf2-trnL-CAA_p3 ycf2-trnL-CAA 3 GTTCTTGCAGAGTGGAACCA AAATGGTAGACACGCGAGAC 20 20 50.0 50.0 58.0 58.0 0.0 15.9 0.040512 93192 93857 715-1291 0.588235 70.2 ycf2-trnL-CAA_p4 ycf2-trnL-CAA 4 GGCAAGCGGATCCTTTATGA AAATGGTAGACACGCGAGAC 20 20 50.0 50.0 58.0 58.0 10.8 15.9 0.040512 93192 93857 768-1344 0.588235 70.0 ycf2-trnL-CAA_p5 ycf2-trnL-CAA 5 TAGCCGGAAAGTTATGTGGC AAATGGTAGACACGCGAGAC 20 20 50.0 50.0 58.0 58.0 5.0 15.9 0.040511 93192 93857 760-797 0.529412 67.4 ndhF-rpl32_p1 ndhF-rpl32 1 AAGCGGGTCGATCAAGTAAC ATTCCAGGCTTTTGTCGGTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.010594 113090 114214 1286-2156 0.764706 82.5 ndhF-rpl32_p2 ndhF-rpl32 2 CCGTGTGAACCAAAACCCTA ATTCCAGGCTTTTGTCGGTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.034532 113090 114214 1514-2384 0.764706 82.3 ndhF-rpl32_p3 ndhF-rpl32 3 AAGCGGGTCGATCAAGTAAC AATTCCAGGCTTTTGTCGGT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.010594 113090 114214 1287-2157 0.705882 80.2 ndhF-rpl32_p4 ndhF-rpl32 4 CCGTGTGAACCAAAACCCTA AATTCCAGGCTTTTGTCGGT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.034532 113090 114214 1515-2385 0.705882 79.9 ndhF-rpl32_p5 ndhF-rpl32 5 GTTGCCGACGGAAAAAGAAG ATTCCAGGCTTTTGTCGGTT 20 20 50.0 45.0 58.0 58.0 20.5 0.0 0.037038 113090 114214 1108-1978 0.705882 79.9 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 ATTGGGCAGCCTTAAAAGCT AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 58.1 58.0 12.4 0.0 0.065054 114380 115311 967-1094 0.823529 84.4 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 ATTGGGCAGCCTTAAAAGCT CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 58.1 58.0 12.4 0.0 0.066425 114380 115311 968-1095 0.823529 84.4 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GGGCAGCCTTAAAAGCTTTG AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 57.9 58.0 13.5 0.0 0.092440 114380 115311 964-1091 0.823529 84.2 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GGGCAGCCTTAAAAGCTTTG CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 57.9 58.0 13.5 0.0 0.093810 114380 115311 965-1092 0.823529 84.2 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 ATTGGGCAGCCTTAAAAGCT CTCGCACTGCTTCCTAAGAG 20 20 45.0 55.0 58.1 58.1 12.4 0.0 0.137306 114380 115311 988-1115 0.823529 83.8 ycf1_p1 ycf1 1 TCTTTTCTTGGCGTTACCGT GAAACCTTGGCACAGATCCA 20 20 45.0 50.0 57.8 58.1 0.0 0.0 0.333902 127620 127739 571-580 0.529412 67.5 ycf1_p2 ycf1 2 TCTTGGCGTTACCGTTTTCT GAAACCTTGGCACAGATCCA 20 20 45.0 50.0 57.8 58.1 0.0 0.0 0.333902 127620 127739 575-575 0.176471 45.6 ycf1_p3 ycf1 3 TCTTGGCGTTACCGTTTTCT TGAAACCTTGGCACAGATCC 20 20 45.0 50.0 57.8 58.1 0.0 0.0 0.333902 127620 127739 576-576 0.176471 45.6 ycf1_p4 ycf1 4 TGGCGTTACCGTTTTCTTCT GAAACCTTGGCACAGATCCA 20 20 45.0 50.0 57.8 58.1 0.0 0.0 0.333902 127620 127739 572-572 0.176471 45.6 ycf1_p5 ycf1 5 TGGCGTTACCGTTTTCTTCT TGAAACCTTGGCACAGATCC 20 20 45.0 50.0 57.8 58.1 0.0 0.0 0.333902 127620 127739 573-573 0.176471 45.6 trnL-CAA-ycf2_p1 trnL-CAA-ycf2 1 AAATGGTAGACACGCGAGAC CAGCCCTTTGTCTCTGTGTT 20 20 50.0 50.0 58.0 58.0 15.9 0.0 0.034958 145528 146193 591-1167 0.588235 70.4 trnL-CAA-ycf2_p2 trnL-CAA-ycf2 2 TGAAATGGTAGACACGCGAG CAGCCCTTTGTCTCTGTGTT 20 20 50.0 50.0 58.0 58.0 15.9 0.0 0.036329 145528 146193 593-1169 0.588235 70.4 trnL-CAA-ycf2_p3 trnL-CAA-ycf2 3 AAATGGTAGACACGCGAGAC GTTCTTGCAGAGTGGAACCA 20 20 50.0 50.0 58.0 58.0 15.9 0.0 0.040512 145528 146193 715-1291 0.588235 70.2 trnL-CAA-ycf2_p4 trnL-CAA-ycf2 4 AAATGGTAGACACGCGAGAC GGCAAGCGGATCCTTTATGA 20 20 50.0 50.0 58.0 58.0 15.9 10.8 0.040512 145528 146193 768-1344 0.588235 70.0 trnL-CAA-ycf2_p5 trnL-CAA-ycf2 5 AAATGGTAGACACGCGAGAC TAGCCGGAAAGTTATGTGGC 20 20 50.0 50.0 58.0 58.0 15.9 5.0 0.040511 145528 146193 760-797 0.529412 66.8