primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score tRNA-His (GUG)-psbA_p1 tRNA-His (GUG)-psbA 1 CTGCCTTAATCCACTTGGCT TAATATCGTCGCTGCTCACG 20 20 50.0 50.0 57.9 58.0 0.0 13.0 0.167203 79 463 742-742 0.250000 48.7 tRNA-His (GUG)-psbA_p2 tRNA-His (GUG)-psbA 2 CTGCCTTAATCCACTTGGCT TCCATTCCACATGTTAGGCG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.171746 79 463 895-895 0.250000 48.6 tRNA-His (GUG)-psbA_p3 tRNA-His (GUG)-psbA 3 ACTGCCTTAATCCACTTGGC TAATATCGTCGCTGCTCACG 20 20 50.0 50.0 58.2 58.0 0.0 13.0 0.192990 79 463 743-743 0.250000 48.5 tRNA-His (GUG)-psbA_p4 tRNA-His (GUG)-psbA 4 ACTGCCTTAATCCACTTGGC TCCATTCCACATGTTAGGCG 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.197534 79 463 896-896 0.250000 48.4 tRNA-His (GUG)-psbA_p5 tRNA-His (GUG)-psbA 5 CTGCCTTAATCCACTTGGCT GTTGACAGTCAAGGTCGTGT 20 20 50.0 50.0 57.9 58.1 0.0 16.7 0.198856 79 463 561-561 0.250000 48.4 matK-tRNA-Lys (UUU)_p1 matK-tRNA-Lys (UUU) 1 AGTGCGTAGATGTACTCCTGA TCTGGGTTGCTAACTCAACG 21 20 47.6 50.0 58.0 57.8 0.0 3.7 1.164502 3544 4250 839-839 1.000000 71.6 matK-tRNA-Lys (UUU)_p2 matK-tRNA-Lys (UUU) 2 AGTGCGTAGATGTACTCCTGA AACGGTAGAGTACTCGGCTT 21 20 47.6 50.0 58.0 58.2 0.0 17.1 1.169104 3544 4250 823-823 1.000000 71.6 matK-tRNA-Lys (UUU)_p3 matK-tRNA-Lys (UUU) 3 AGTGCGTAGATGTACTCCTGA ACGGTAGAGTACTCGGCTTT 21 20 47.6 50.0 58.0 58.2 0.0 17.1 1.169104 3544 4250 822-822 1.000000 71.6 matK-tRNA-Lys (UUU)_p4 matK-tRNA-Lys (UUU) 4 GACGAGACCCATCTTTTTCGA TCTGGGTTGCTAACTCAACG 21 20 47.6 50.0 58.0 57.8 0.0 3.7 1.208204 3544 4250 790-790 1.000000 71.3 matK-tRNA-Lys (UUU)_p5 matK-tRNA-Lys (UUU) 5 GACGAGACCCATCTTTTTCGA ACGGTAGAGTACTCGGCTTT 21 20 47.6 50.0 58.0 58.2 0.0 17.1 1.212806 3544 4250 773-773 1.000000 71.3 tRNA-Lys (UUU)-rps16_p1 tRNA-Lys (UUU)-rps16 1 AAAGCCGAGTACTCTACCGT TTTTCTGGAAAAGGGGGCTC 20 20 50.0 50.0 58.2 58.0 20.3 4.6 0.178101 4288 4981 825-839 1.000000 80.1 tRNA-Lys (UUU)-rps16_p2 tRNA-Lys (UUU)-rps16 2 AAGCCGAGTACTCTACCGTT TTTTCTGGAAAAGGGGGCTC 20 20 50.0 50.0 58.2 58.0 20.3 4.6 0.178101 4288 4981 824-838 1.000000 80.1 tRNA-Lys (UUU)-rps16_p3 tRNA-Lys (UUU)-rps16 3 CCGCACTTAAAAGCCGAGTA TTTTCTGGAAAAGGGGGCTC 20 20 50.0 50.0 58.3 58.0 5.3 4.6 0.292488 4288 4981 834-848 1.000000 79.2 tRNA-Lys (UUU)-rps16_p4 tRNA-Lys (UUU)-rps16 4 AAAGCCGAGTACTCTACCGT GAAAAGGGGGCTCAACCTAC 20 20 50.0 55.0 58.2 58.2 20.3 0.0 0.332926 4288 4981 818-832 1.000000 78.9 tRNA-Lys (UUU)-rps16_p5 tRNA-Lys (UUU)-rps16 5 AAGCCGAGTACTCTACCGTT GAAAAGGGGGCTCAACCTAC 20 20 50.0 55.0 58.2 58.2 20.3 0.0 0.332926 4288 4981 817-831 1.000000 78.9 tRNA-Cys (GCA)-petN_p1 tRNA-Cys (GCA)-petN 1 TTTCCCCAGTTCAAATCCGG TTAAAGCAGCCCAAGCAAGA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.088172 28157 29036 768-967 1.000000 84.5 tRNA-Cys (GCA)-petN_p2 tRNA-Cys (GCA)-petN 2 TTTCCCCAGTTCAAATCCGG CAGCCCAAGCAAGACTTACA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.185908 28157 29036 762-961 1.000000 83.8 tRNA-Cys (GCA)-petN_p3 tRNA-Cys (GCA)-petN 3 GGGGGACTGCAAATCCTTTT TTAAAGCAGCCCAAGCAAGA 20 20 50.0 45.0 58.4 58.0 14.7 0.0 0.361535 28157 29036 786-985 1.000000 82.3 tRNA-Cys (GCA)-petN_p4 tRNA-Cys (GCA)-petN 4 TGTATTGTTTTGGCGGCATG TTAAAGCAGCCCAAGCAAGA 20 20 45.0 45.0 57.6 58.0 14.3 0.0 0.366597 28157 29036 821-1020 1.000000 82.2 tRNA-Cys (GCA)-petN_p5 tRNA-Cys (GCA)-petN 5 GTATTGTTTTGGCGGCATGG TTAAAGCAGCCCAAGCAAGA 20 20 50.0 45.0 58.4 58.0 14.3 0.0 0.366764 28157 29036 820-1019 1.000000 82.2 tRNA-Thr (GGU)-psbD_p1 tRNA-Thr (GGU)-psbD 1 GTGGTAGAGTAACGCCATGG TCCGTAACCAGTCGTCCATA 20 20 55.0 50.0 58.1 57.9 7.6 0.0 0.191338 31954 33318 1479-1528 1.000000 81.7 tRNA-Thr (GGU)-psbD_p2 tRNA-Thr (GGU)-psbD 2 TCAGTGGTAGAGTAACGCCA TCCGTAACCAGTCGTCCATA 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.213493 31954 33318 1482-1531 1.000000 81.5 tRNA-Thr (GGU)-psbD_p3 tRNA-Thr (GGU)-psbD 3 GTGGTAGAGTAACGCCATGG GAAGAGCAATAGACCGGACC 20 20 55.0 55.0 58.1 57.8 7.6 9.5 0.290669 31954 33318 1523-1572 1.000000 80.8 tRNA-Thr (GGU)-psbD_p4 tRNA-Thr (GGU)-psbD 4 GTGGTAGAGTAACGCCATGG GGAAGAGCAATAGACCGGAC 20 20 55.0 55.0 58.1 57.8 7.6 9.5 0.290669 31954 33318 1524-1573 1.000000 80.8 tRNA-Thr (GGU)-psbD_p5 tRNA-Thr (GGU)-psbD 5 TCAGTGGTAGAGTAACGCCA GAAGAGCAATAGACCGGACC 20 20 50.0 55.0 58.1 57.8 0.0 9.5 0.312824 31954 33318 1526-1575 1.000000 80.6 psaA-ycf3_p1 psaA-ycf3 1 GTTCTTGAAAAATGGCCGGG AGCGCAGAATTGGTTGAAGA 20 20 50.0 45.0 57.9 58.1 2.2 11.5 0.182629 42276 42893 757-762 1.000000 80.3 psaA-ycf3_p2 psaA-ycf3 2 GTTCTTGAAAAATGGCCGGG TGAAGATCACAAGGCGGTTC 20 20 50.0 50.0 57.9 58.2 2.2 0.0 0.270438 42276 42893 743-748 1.000000 79.7 psaA-ycf3_p3 psaA-ycf3 3 CCCATGCCTCGAAAGAAGTT AGCGCAGAATTGGTTGAAGA 20 20 50.0 45.0 58.2 58.1 0.0 11.5 0.277395 42276 42893 732-737 1.000000 79.6 psaA-ycf3_p4 psaA-ycf3 4 GTTCTTGAAAAATGGCCGGG TTGAAGATCACAAGGCGGTT 20 20 50.0 45.0 57.9 57.7 2.2 0.0 0.349201 42276 42893 744-749 1.000000 79.0 psaA-ycf3_p5 psaA-ycf3 5 CCCATGCCTCGAAAGAAGTT TGAAGATCACAAGGCGGTTC 20 20 50.0 50.0 58.2 58.2 0.0 0.0 0.365204 42276 42893 718-723 1.000000 79.0 ycf3-tRNA-Ser (GGA)_p1 ycf3-tRNA-Ser (GGA) 1 TCTCCTGAAGTGGTCGGAAT CCCTCGGTAAACAAAAGCCT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.155778 44874 45701 983-991 1.000000 81.0 ycf3-tRNA-Ser (GGA)_p2 ycf3-tRNA-Ser (GGA) 2 TCTCCTGAAGTGGTCGGAAT ACGGAAAGAGAGGGATTCGA 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.212764 44874 45701 1004-1012 1.000000 80.5 ycf3-tRNA-Ser (GGA)_p3 ycf3-tRNA-Ser (GGA) 3 TCTCCTGAAGTGGTCGGAAT TTCCAATGCTACGCCTTCAA 20 20 50.0 45.0 58.1 57.8 0.0 0.0 0.254079 44874 45701 954-962 1.000000 80.3 ycf3-tRNA-Ser (GGA)_p4 ycf3-tRNA-Ser (GGA) 4 TCTCCTGAAGTGGTCGGAAT AGTTCCAATGCTACGCCTTC 20 20 50.0 50.0 58.1 58.3 0.0 0.0 0.322349 44874 45701 956-964 1.000000 79.8 ycf3-tRNA-Ser (GGA)_p5 ycf3-tRNA-Ser (GGA) 5 TTCTCCTGAAGTGGTCGGAA CCCTCGGTAAACAAAAGCCT 20 20 50.0 50.0 58.3 58.1 0.0 0.0 0.382307 44874 45701 984-992 1.000000 79.2 ndhC-tRNA-Val (UAC)_p1 ndhC-tRNA-Val (UAC) 1 TCATATTCGTGAAGCAGAAACA AGAAGGTCTACGGTTCGAGT 22 20 36.4 50.0 56.1 57.8 0.0 0.0 4.083948 50987 52898 1538-1978 1.000000 52.8 ndhC-tRNA-Val (UAC)_p2 ndhC-tRNA-Val (UAC) 2 TCATATTCGTGAAGCAGAAACA GAAGGTCTACGGTTCGAGTC 22 20 36.4 55.0 56.1 57.5 0.0 0.0 4.427720 50987 52898 1537-1977 1.000000 50.1 ndhC-tRNA-Val (UAC)_p3 ndhC-tRNA-Val (UAC) 3 TCATATTCGTGAAGCAGAAACA GTTCGAGTCCGTATAGCCCT 22 20 36.4 55.0 56.1 58.7 0.0 0.0 4.570014 50987 52898 1526-1966 1.000000 49.0 ndhC-tRNA-Val (UAC)_p4 ndhC-tRNA-Val (UAC) 4 CATATTCGTGAAGCAGAAACA AGAAGGTCTACGGTTCGAGT 21 20 38.1 50.0 54.6 57.8 0.0 0.0 4.585537 50987 52898 1537-1977 1.000000 48.8 ndhC-tRNA-Val (UAC)_p5 ndhC-tRNA-Val (UAC) 5 TCATATTCGTGAAGCAGAAACAT AGAAGGTCTACGGTTCGAGT 23 20 34.8 50.0 56.6 57.8 0.0 0.0 4.587896 50987 52898 1538-1978 1.000000 48.8 tRNA-Met (CAU)-atpE_p1 tRNA-Met (CAU)-atpE 1 CTTTGACGTAGGTCTGCCTC GAAATGATGCCGAGATGGGT 20 20 55.0 50.0 58.0 58.0 16.0 0.0 0.029459 53835 53999 1003-1011 1.000000 81.8 tRNA-Met (CAU)-atpE_p2 tRNA-Met (CAU)-atpE 2 CTTTGACGTAGGTCTGCCTC ACCGCGAAGGCTATGAATTT 20 20 55.0 45.0 58.0 58.0 16.0 8.2 0.040718 53835 53999 1279-1287 1.000000 81.6 tRNA-Met (CAU)-atpE_p3 tRNA-Met (CAU)-atpE 3 GCTCCATGTGCTCTGATTCA GAAATGATGCCGAGATGGGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.061232 53835 53999 1075-1083 1.000000 81.4 tRNA-Met (CAU)-atpE_p4 tRNA-Met (CAU)-atpE 4 GCTCCATGTGCTCTGATTCA ACCGCGAAGGCTATGAATTT 20 20 50.0 45.0 58.0 58.0 0.0 8.2 0.072491 53835 53999 1351-1359 1.000000 81.3 tRNA-Met (CAU)-atpE_p5 tRNA-Met (CAU)-atpE 5 CTTTGACGTAGGTCTGCCTC GCCACAGCTGTAGATATCGG 20 20 55.0 55.0 58.0 57.9 16.0 21.2 0.074019 53835 53999 1115-1123 1.000000 81.3 atpE_p1 atpE 1 ACTCCCCTGAAAAGCATTGG ACCGCGAAGGCTATGAATTT 20 20 50.0 45.0 58.1 58.0 0.0 8.2 0.109519 54000 54404 926-934 1.000000 81.6 atpE_p2 atpE 2 ACTCCCCTGAAAAGCATTGG ATCTTCCGGTTCGTACAAGC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.077102 54000 54404 1553-1561 1.000000 81.0 atpE_p3 atpE 3 ACTCCCCTGAAAAGCATTGG CCTGCGGATGATTTGACTGA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.099552 54000 54404 1388-1396 1.000000 81.0 atpE_p4 atpE 4 ACTCCCCTGAAAAGCATTGG TTGGTTTGACTGCCCTAACC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.081426 54000 54404 1630-1638 1.000000 80.9 atpE_p5 atpE 5 TCCGTGGAGTAAGACATCGA ATCTTCCGGTTCGTACAAGC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.124284 54000 54404 1607-1615 1.000000 80.5 rbcL-psaI_p1 rbcL-psaI 1 ACTACAGTTCGGTGGAGGAA TTGTTTTTCGAGACCCCGTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.046621 58157 59415 2043-2050 1.000000 81.4 rbcL-psaI_p2 rbcL-psaI 2 TCTTGCTCGCGAAAGTACTC TTGTTTTTCGAGACCCCGTT 20 20 50.0 45.0 58.0 58.0 17.6 0.0 0.062709 58157 59415 1932-1939 1.000000 81.4 rbcL-psaI_p3 rbcL-psaI 3 AATGAGGGACGTGATCTTGC TTGTTTTTCGAGACCCCGTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.071089 58157 59415 1946-1953 1.000000 81.3 rbcL-psaI_p4 rbcL-psaI 4 CTTGACCGAGATCTTTGGGG TTGTTTTTCGAGACCCCGTT 20 20 55.0 45.0 58.0 58.0 16.7 0.0 0.071089 58157 59415 2073-2080 1.000000 81.2 rbcL-psaI_p5 rbcL-psaI 5 TTGAATGCTACTGCGGGTAC TTGTTTTTCGAGACCCCGTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.059793 58157 59415 2529-2529 0.500000 59.6 petA-psbJ_p1 petA-psbJ 1 CAGGGCGATGCAGAAATAGT AACTGGCCGTTTTGATCCTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.045582 62840 63717 1605-1616 1.000000 81.4 petA-psbJ_p2 petA-psbJ 2 CAGGGCGATGCAGAAATAGT ACTGGCCGTTTTGATCCTTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.045582 62840 63717 1604-1615 1.000000 81.4 petA-psbJ_p3 petA-psbJ 3 GCATCGGATGGACATCAAGT AACTGGCCGTTTTGATCCTT 20 20 50.0 45.0 58.0 58.0 19.0 0.0 0.045582 62840 63717 1728-1739 1.000000 81.4 petA-psbJ_p4 petA-psbJ 4 GCATCGGATGGACATCAAGT ACTGGCCGTTTTGATCCTTT 20 20 50.0 45.0 58.0 58.0 19.0 0.0 0.045582 62840 63717 1727-1738 1.000000 81.4 petA-psbJ_p5 petA-psbJ 5 TGCATCGGATGGACATCAAG ACTGGCCGTTTTGATCCTTT 20 20 50.0 45.0 58.0 58.0 19.0 0.0 0.046955 62840 63717 1728-1739 1.000000 81.4 psbT-psbN_p1 psbT-psbN 1 ATCTTCTTTCGAGAACCGCC TTCGAGGAACACGGAGACTA 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.201134 74014 74072 128-128 1.000000 81.5 psbT-psbN_p2 psbT-psbN 2 TTCTTTCGAGAACCGCCAAA TTCGAGGAACACGGAGACTA 20 20 45.0 50.0 58.0 57.8 0.0 0.0 0.233297 74014 74072 125-125 1.000000 81.3 psbT-psbN_p3 psbT-psbN 3 ATCTTCTTTCGAGAACCGCC TCGAGGAACACGGAGACTAG 20 20 50.0 55.0 58.0 58.3 0.0 0.0 0.276154 74014 74072 127-127 1.000000 80.9 psbT-psbN_p4 psbT-psbN 4 TTCTTTCGAGAACCGCCAAA TCGAGGAACACGGAGACTAG 20 20 45.0 55.0 58.0 58.3 0.0 0.0 0.308317 74014 74072 124-124 1.000000 80.8 psbT-psbN_p5 psbT-psbN 5 ATCTTCTTTCGAGAACCGCC CATTCGAGGAACACGGAGAC 20 20 50.0 55.0 58.0 58.4 0.0 0.0 0.381392 74014 74072 130-130 1.000000 80.0 rpl16_p1 rpl16 1 TCTTTGTTTCCACACTCCTT ACCATTTCATTTGGTAGAAGTGC 20 23 40.0 39.1 54.7 57.6 0.0 0.0 6.691145 80948 82294 1392-1528 1.000000 41.2 rpl16_p2 rpl16 2 ATCTTTGTTTCCACACTCCT ACCATTTCATTTGGTAGAAGTGC 20 23 40.0 39.1 54.5 57.6 0.0 0.0 6.932879 80948 82294 1393-1529 1.000000 41.2 rpl16_p3 rpl16 3 TCTTTGTTTCCACACTCCTT CCATTTCATTTGGTAGAAGTGCT 20 23 40.0 39.1 54.7 57.4 0.0 0.0 6.949614 80948 82294 1391-1527 1.000000 41.2 rpl16_p4 rpl16 4 ATCTTTGTTTCCACACTCCTT ACCATTTCATTTGGTAGAAGTGC 21 23 38.1 39.1 55.3 57.6 0.0 0.0 7.076068 80948 82294 1393-1529 1.000000 41.2 rpl16_p5 rpl16 5 ACCCTTTATCTTTGTTTCCACAC ACCATTTCATTTGGTAGAAGTGC 23 23 39.1 39.1 57.2 57.6 0.0 0.0 7.175890 80948 82294 1400-1536 1.000000 41.2 ndhF_p1 ndhF 1 GAAGACAACAGCTCAGGTCC TATAGCCTCGTCGGAATCGA 20 20 55.0 50.0 58.2 57.8 4.9 0.0 0.372294 110030 112249 2967-2989 0.750000 69.4 ndhF_p2 ndhF 2 CGAGAAGACAACAGCTCAGG TATAGCCTCGTCGGAATCGA 20 20 55.0 50.0 58.3 57.8 0.0 0.0 0.466732 110030 112249 2970-2992 0.750000 68.7 ndhF_p3 ndhF 3 TCGAGAAGACAACAGCTCAG TATAGCCTCGTCGGAATCGA 20 20 50.0 50.0 57.3 57.8 0.0 0.0 0.888259 110030 112249 2971-2993 0.750000 65.3 ndhF_p4 ndhF 4 GCTCAGGTCCAGGACAGTTA TATAGCCTCGTCGGAATCGA 20 20 55.0 50.0 58.7 57.8 21.8 0.0 0.907242 110030 112249 2957-2979 0.750000 65.2 ndhF_p5 ndhF 5 AGAAGACAACAGCTCAGGTC TATAGCCTCGTCGGAATCGA 20 20 50.0 50.0 57.2 57.8 0.0 0.0 1.004105 110030 112249 2968-2990 0.750000 64.4 ndhF-rpl32_p1 ndhF-rpl32 1 GGAAGGAAAGGTATTATCCATGC GTACGTTTCTTTGGAACCGC 23 20 43.5 50.0 57.0 57.7 0.0 0.0 4.271994 112250 113100 891-918 1.000000 51.7 ndhF-rpl32_p2 ndhF-rpl32 2 GGAAGGAAAGGTATTATCCATGC GCTTTTACCGCGGCAAAATA 23 20 43.5 45.0 57.0 57.7 0.0 30.9 4.232390 112250 113100 960-987 1.000000 51.6 ndhF-rpl32_p3 ndhF-rpl32 3 GGAAGGAAAGGTATTATCCATGC CGCGGCAAAATATCCCTTTT 23 20 43.5 45.0 57.0 57.4 0.0 0.0 4.544192 112250 113100 952-979 1.000000 49.1 ndhF-rpl32_p4 ndhF-rpl32 4 GGAAGGAAAGGTATTATCCATGC TTACCGCGGCAAAATATCCC 23 20 43.5 50.0 57.0 58.7 0.0 28.6 4.655838 112250 113100 956-983 1.000000 48.2 ndhF-rpl32_p5 ndhF-rpl32 5 GGAAGGAAAGGTATTATCCATGC AGAAAAAGCTTTTACCGCGG 23 20 43.5 45.0 57.0 57.3 0.0 26.9 4.665993 112250 113100 967-994 1.000000 48.1 rpl32-tRNA-Leu (UAG)_p1 rpl32-tRNA-Leu (UAG) 1 TCCACCGGACAGTCAAAAAG TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.0 57.9 9.5 0.0 0.162484 113275 114137 962-973 1.000000 82.0 rpl32-tRNA-Leu (UAG)_p2 rpl32-tRNA-Leu (UAG) 2 TCCACCGGACAGTCAAAAAG AGCAGCGTGTCTACCAATTT 20 20 50.0 45.0 58.0 57.8 9.5 0.0 0.223211 113275 114137 955-966 1.000000 81.5 rpl32-tRNA-Leu (UAG)_p3 rpl32-tRNA-Leu (UAG) 3 TCCACCGGACAGTCAAAAAG CCTAAGAGCAGCGTGTCTAC 20 20 50.0 55.0 58.0 57.8 9.5 0.0 0.234501 113275 114137 961-972 1.000000 81.4 rpl32-tRNA-Leu (UAG)_p4 rpl32-tRNA-Leu (UAG) 4 TCCACCGGACAGTCAAAAAG CTAAGAGCAGCGTGTCTACC 20 20 50.0 55.0 58.0 57.8 9.5 0.0 0.234501 113275 114137 960-971 1.000000 81.4 rpl32-tRNA-Leu (UAG)_p5 rpl32-tRNA-Leu (UAG) 5 AATCAGTTTCCACCGGACAG TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 57.8 57.9 9.5 0.0 0.309281 113275 114137 970-981 1.000000 80.8 ccsA-ndhD_p1 ccsA-ndhD 1 ACATAGTTATGGTTCATTCACA TCAGTTGACAAGGTGGAAGC 22 20 31.8 50.0 53.2 58.0 4.3 0.0 6.863885 115265 115491 311-317 1.000000 43.3 ccsA-ndhD_p2 ccsA-ndhD 2 TGGAGTCAATCTATTAGGAATAGGT TCAGTTGACAAGGTGGAAGC 25 20 36.0 50.0 56.6 58.0 6.4 0.0 6.451905 115265 115491 338-344 1.000000 43.0 ccsA-ndhD_p3 ccsA-ndhD 3 TGGAGTCAATCTATTAGGAATAGGTT TCAGTTGACAAGGTGGAAGC 26 20 34.6 50.0 57.2 58.0 6.4 0.0 6.831656 115265 115491 338-344 1.000000 43.0 ccsA-ndhD_p4 ccsA-ndhD 4 TTGGAGTCAATCTATTAGGAATAGGT TCAGTTGACAAGGTGGAAGC 26 20 34.6 50.0 57.2 58.0 6.4 0.0 6.831656 115265 115491 339-345 1.000000 43.0 ccsA-ndhD_p5 ccsA-ndhD 5 TGGAGTCAATCTATTAGGAATAGG TCAGTTGACAAGGTGGAAGC 24 20 37.5 50.0 55.0 58.0 6.4 0.0 7.055991 115265 115491 338-344 1.000000 43.0 ycf1_p1 ycf1 1 TCCGTTCATCTTCCTCCCTT AGCCCAGGTTACGAAAACTC 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.227811 127554 127673 1444-1450 1.000000 80.3 ycf1_p2 ycf1 2 TCCGTTCATCTTCCTCCCTT GCCCAGGTTACGAAAACTCT 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.227811 127554 127673 1443-1449 1.000000 80.3 ycf1_p3 ycf1 3 TACACGTCTGCCTTTTCTCG AGCCCAGGTTACGAAAACTC 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.240758 127554 127673 1044-1050 1.000000 80.1 ycf1_p4 ycf1 4 TACACGTCTGCCTTTTCTCG GCCCAGGTTACGAAAACTCT 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.240758 127554 127673 1043-1049 1.000000 80.1 ycf1_p5 ycf1 5 TAGCGCGTATGGATCCATTG GCCCAGGTTACGAAAACTCT 20 20 50.0 50.0 57.9 57.8 31.7 0.0 0.259281 127554 127673 1212-1218 1.000000 80.1 ycf1-tRNA-Asn (GUU)_p1 ycf1-tRNA-Asn (GUU) 1 ATAGTCCGACCACAACGACT AGGATTCGAACCTACGACCA 20 20 50.0 50.0 58.5 58.2 0.0 15.0 0.614139 129366 129968 619-747 1.000000 79.8 ycf1-tRNA-Asn (GUU)_p2 ycf1-tRNA-Asn (GUU) 2 CCGACCACAACGACTGAATT AGGATTCGAACCTACGACCA 20 20 50.0 50.0 58.5 58.2 0.0 15.0 0.648000 129366 129968 614-742 1.000000 79.5 ycf1-tRNA-Asn (GUU)_p3 ycf1-tRNA-Asn (GUU) 3 ATAGTCCGACCACAACGACT AATCAGTTAACAGCCGACCG 20 20 50.0 50.0 58.5 58.3 0.0 8.6 0.735496 129366 129968 600-728 1.000000 78.8 ycf1-tRNA-Asn (GUU)_p4 ycf1-tRNA-Asn (GUU) 4 CCGACCACAACGACTGAATT AATCAGTTAACAGCCGACCG 20 20 50.0 50.0 58.5 58.3 0.0 8.6 0.769357 129366 129968 595-723 1.000000 78.6 ycf1-tRNA-Asn (GUU)_p5 ycf1-tRNA-Asn (GUU) 5 ATAGTCCGACCACAACGACT CCCCAAGTAGGATTCGAACC 20 20 50.0 55.0 58.5 57.7 0.0 0.0 0.784707 129366 129968 627-755 1.000000 78.4