| Genus | Family | Order | Species | Genome length | Top marker | Markers | Primers | Action |
|---|---|---|---|---|---|---|---|---|
| Zabelia | Caprifoliaceae | Dipsacales | 6 | 157–158 kb | ycf2-trnL-CAA (89.4) | 263 | 80 | View |
| Zamia | Zamiaceae | Cycadales | 2 | 165–165 kb | psbF-psbE (87.5) | 268 | 95 | View |
| Zantedeschia | Araceae | Alismatales | 2 | 175–175 kb | trnI-CAU-ycf2 (76.8) | 283 | 85 | View |
| Zanthoxylum | Rutaceae | Sapindales | 31 | 157–159 kb | trnE-UUC-trnT-GGU (79.3) | 272 | 95 | View |
| Zapoteca | Fabaceae | Fabales | 2 | 164–180 kb | trnS-GCU-trnG-UCC (84.8) | 266 | 90 | View |
| Zea | Poaceae | Poales | 7 | 140–141 kb | psbE-petL (61.9) | 269 | 100 | View |
| Zehneria | Cucurbitaceae | Cucurbitales | 7 | 157–157 kb | trnT-trnL (67.9) | 262 | 90 | View |
| Zelkova | Ulmaceae | Rosales | 4 | 159–159 kb | trnH-GUG-psbA (83.6) | 267 | 105 | View |
| Zephyranthes | Amaryllidaceae | Asparagales | 5 | 158–159 kb | rps19-psbA (78.7) | 286 | 100 | View |
| Zeuxine | Orchidaceae | Asparagales | 3 | 151–152 kb | ycf3-trnS-GGA (87.9) | 274 | 100 | View |
| Zingiber | Zingiberaceae | Zingiberales | 23 | 162–164 kb | trnI-CAU-ycf2 (79.8) | 273 | 95 | View |
| Zizania | Poaceae | Poales | 3 | 136–136 kb | rps3-rpl22 (81.0) | 265 | 110 | View |
| Ziziphora | Lamiaceae | Lamiales | 6 | 152–152 kb | rps2-rpoC2 (65.3) | 268 | 95 | View |
| Ziziphus | Rhamnaceae | Rosales | 10 | 161–162 kb | trnR-UCU-atpA (79.2) | 266 | 105 | View |
| Zollernia | Fabaceae | Fabales | 2 | 155–156 kb | atpI-atpH (65.2) | 262 | 100 | View |
| Zornia | Fabaceae | Fabales | 2 | 154–155 kb | atpH-atpF (87.0) | 265 | 115 | View |
| Zostera | Zosteraceae | Alismatales | 5 | 145–146 kb | petG-trnW-CCA (74.7) | 271 | 90 | View |
| Zoysia | Poaceae | Poales | 6 | 136–136 kb | atpB-rbcL (67.2) | 268 | 90 | View |
| Zygia | Fabaceae | Fabales | 2 | 164–177 kb | trnT-UGU-trnL-UAA (88.1) | 268 | 95 | View |
| Zygophyllum | Zygophyllaceae | Zygophyllales | 5 | 104–105 kb | rps7-trnL-CAA (88.5) | 217 | 80 | View |