| Genus | Family | Order | Species | Genome length | Top marker | Markers | Primers | Action |
|---|---|---|---|---|---|---|---|---|
| Vinca | Apocynaceae | Gentianales | 2 | 153–154 kb | psbF-psbE (86.7) | 271 | 80 | View |
| Vincetoxicum | Apocynaceae | Gentianales | 12 | 159–161 kb | ndhF-rpl32 (83.2) | 270 | 85 | View |
| Viola | Violaceae | Malpighiales | 42 | 156–159 kb | trnG-UCC-trnR-UCU (77.7) | 260 | 90 | View |
| Viridantha | Bromeliaceae | Poales | 3 | 157–157 kb | trnM-CAU-atpE (69.8) | 280 | 90 | View |
| Vischeria | Chlorobotryaceae | Eustigmatales | 2 | 126–127 kb | ccsA-sufB (88.1) | 354 | 85 | View |
| Viscum | Viscaceae | Santalales | 6 | 126–129 kb | APQ78_gt009-APQ78_gt010 (85.7) | 233 | 75 | View |
| Vitex | Lamiaceae | Lamiales | 13 | 153–155 kb | ndhF-trnL-UAG (68.0) | 265 | 100 | View |
| Vitis | Vitaceae | Vitales | 57 | 161–161 kb | ycf1-ndhF (76.5) | 266 | 95 | View |
| Vittaria | Pteridaceae | Polypodiales | 2 | 150–151 kb | ndhG (81.7) | 259 | 95 | View |
| Vriesea | Bromeliaceae | Poales | 4 | 157–158 kb | ndhF-rpl32 (80.4) | 281 | 85 | View |
| Vrydagzynea | Orchidaceae | Asparagales | 2 | 152–152 kb | psbF-psbE (79.0) | 275 | 100 | View |
| Vuhuangia | Lamiaceae | Lamiales | 2 | 153–153 kb | rpoA-rps11 (60.6) | 267 | 105 | View |
| Wallichia | Arecaceae | Arecales | 2 | 160–160 kb | rps19-psbA (85.5) | 270 | 90 | View |
| Wallisia | Bromeliaceae | Poales | 2 | 157–157 kb | ycf1-ndhF (70.7) | 281 | 90 | View |
| Washingtonia | Arecaceae | Arecales | 2 | 158–158 kb | rps19-trnH-GUG (65.2) | 271 | 75 | View |
| Weigela | Caprifoliaceae | Dipsacales | 3 | 157–158 kb | trnN-GUU-ndhF (86.0) | 261 | 75 | View |
| Werauhia | Bromeliaceae | Poales | 2 | 157–157 kb | rps8-rpl14 (70.9) | 281 | 105 | View |
| Widdringtonia | Cupressaceae | Cupressales | 2 | 123–123 kb | accD-ycf1 (63.4) | 235 | 50 | View |
| Wikstroemia | Thymelaeaceae | Malvales | 10 | 173–176 kb | ndhF-rpl32 (83.8) | 289 | 90 | View |
| Wisteria | Fabaceae | Fabales | 2 | 131–131 kb | ndhF-trnH-GUG (77.9) | 226 | 80 | View |
| Wisteriopsis | Fabaceae | Fabales | 2 | 133–133 kb | ndhF-trnH-GUG (70.4) | 226 | 80 | View |
| Withania | Solanaceae | Solanales | 8 | 154–157 kb | trnH-psbA (83.6) | 270 | 90 | View |
| Wolffia | Araceae | Alismatales | 4 | 169–170 kb | trnT-GGU-psbD (90.4) | 272 | 80 | View |
| Woodsia | Woodsiaceae | Polypodiales | 2 | 151–151 kb | trnP-GGG-trnL-UAG (82.6) | 273 | 105 | View |
| Woodwardia | Blechnaceae | Polypodiales | 3 | 153–155 kb | rpoB-trnD-GUC (84.9) | 269 | 75 | View |
| Wurfbainia | Zingiberaceae | Zingiberales | 5 | 164–164 kb | ndhA (61.1) | 252 | 105 | View |
| Xanthium | Asteraceae | Asterales | 2 | 152–152 kb | trnH-psbA (84.4) | 264 | 95 | View |
| Xanthosoma | Araceae | Alismatales | 2 | 164–165 kb | trnS(GCU)-trnS (CGA) (86.5) | 271 | 90 | View |
| Xeranthemum | Asteraceae | Asterales | 3 | 152–152 kb | trnT-UGU-trnL-UAA (70.4) | 267 | 80 | View |
| Xerophyta | Velloziaceae | Pandanales | 14 | 155–156 kb | psbC-trnS-UGA (78.6) | 268 | 95 | View |
| Xylia | Fabaceae | Fabales | 2 | 176–178 kb | clpP-psbB (81.8) | 290 | 85 | View |
| Xylocarpus | Meliaceae | Sapindales | 2 | 159–159 kb | rpl22 (63.3) | 267 | 95 | View |
| Xylosalsola | Amaranthaceae | Caryophyllales | 2 | 151–151 kb | trnN-GUU-ndhF (66.1) | 273 | 90 | View |
| Xylosma | Salicaceae | Malpighiales | 2 | 157–157 kb | ndhC-trnV-UAC (90.5) | 265 | 100 | View |
| Xyris | Xyridaceae | Poales | 2 | 140–141 kb | trnC-GCA-rpoB (89.0) | 255 | 70 | View |
| Yamazakia | Linderniaceae | Lamiales | 2 | 154–154 kb | rps16-trnQ-UUG (88.6) | 271 | 85 | View |
| Yinshania | Brassicaceae | Brassicales | 4 | 155–156 kb | ndhF-rpl32 (65.1) | 270 | 90 | View |
| Yoania | Orchidaceae | Asparagales | 4 | 43–45 kb | rpl16-rps3 (82.0) | 83 | 70 | View |
| Youngia | Asteraceae | Asterales | 2 | 153–153 kb | ndhC-trnV-UAC (77.7) | 271 | 100 | View |
| Ypsilandra | Melanthiaceae | Liliales | 2 | 158–159 kb | rpl22-rps3 (84.2) | 282 | 95 | View |
| Yucca | Asparagaceae | Asparagales | 7 | 158–158 kb | rps19-psbA (71.3) | 271 | 95 | View |
| Yushania | Poaceae | Poales | 9 | 140–140 kb | ndhF-rpl32 (52.1) | 268 | 90 | View |
| Zabelia | Caprifoliaceae | Dipsacales | 6 | 157–158 kb | ycf2-trnL-CAA (89.4) | 263 | 80 | View |
| Zamia | Zamiaceae | Cycadales | 2 | 165–165 kb | psbF-psbE (87.5) | 268 | 95 | View |
| Zantedeschia | Araceae | Alismatales | 2 | 175–175 kb | trnI-CAU-ycf2 (76.8) | 283 | 85 | View |
| Zanthoxylum | Rutaceae | Sapindales | 31 | 157–159 kb | trnE-UUC-trnT-GGU (79.3) | 272 | 95 | View |
| Zapoteca | Fabaceae | Fabales | 2 | 164–180 kb | trnS-GCU-trnG-UCC (84.8) | 266 | 90 | View |
| Zea | Poaceae | Poales | 7 | 140–141 kb | psbE-petL (61.9) | 269 | 100 | View |
| Zehneria | Cucurbitaceae | Cucurbitales | 7 | 157–157 kb | trnT-trnL (67.9) | 262 | 90 | View |
| Zelkova | Ulmaceae | Rosales | 4 | 159–159 kb | trnH-GUG-psbA (83.6) | 267 | 105 | View |
2112 genera