| Genus | Family | Order | Species | Genome length | Top marker | Markers | Primers | Action |
|---|---|---|---|---|---|---|---|---|
| Ruellia | Acanthaceae | Lamiales | 2 | 149–149 kb | ycf2-trnH-GUG (75.6) | 257 | 105 | View |
| Rumex | Polygonaceae | Caryophyllales | 9 | 159–159 kb | rps4-trnT-UGU (83.2) | 269 | 100 | View |
| Ruppia | Cymodoceaceae | Alismatales | 3 | 159–159 kb | trnK-UUU-rps16 (67.4) | 273 | 85 | View |
| Ruscus | Asparagaceae | Asparagales | 2 | 154–154 kb | rpl2-rpl23 (85.4) | 276 | 90 | View |
| Ruta | Rutaceae | Sapindales | 2 | 157–158 kb | rpoB-trnC-GCA (74.8) | 274 | 95 | View |
| Rytidosperma | Poaceae | Poales | 2 | 129–133 kb | rpoC1-rpoC2 (67.4) | 269 | 100 | View |
| Sabal | Arecaceae | Arecales | 10 | 158–159 kb | psbC-trnS-UGA (59.4) | 269 | 100 | View |
| Sabia | Sabiaceae | Proteales | 9 | 162–162 kb | trnH-GUG-psbA (74.7) | 271 | 95 | View |
| Sabulina | Caryophyllaceae | Caryophyllales | 2 | 153–154 kb | trnE-UUC-trnT-GGU (87.7) | 263 | 110 | View |
| Saccharina | Laminariaceae | Laminariales | 4 | 131–131 kb | psbA-cbbx (76.3) | 344 | 90 | View |
| Saccharum | Poaceae | Poales | 12 | 141–141 kb | ndhF-rpl32 (50.3) | 290 | 100 | View |
| Sagina | Caryophyllaceae | Caryophyllales | 4 | 150–151 kb | psbL-psbF (71.8) | 270 | 100 | View |
| Sagittaria | Alismataceae | Alismatales | 2 | 177–177 kb | rpl22-rps19 (63.9) | 269 | 80 | View |
| Salacca | Arecaceae | Arecales | 2 | 157–158 kb | psbM-trnD-GUC (75.3) | 271 | 95 | View |
| Salacia | Celastraceae | Celastrales | 3 | 163–163 kb | trnH-GUG-psbA (73.6) | 267 | 80 | View |
| Salicornia | Amaranthaceae | Caryophyllales | 5 | 153–153 kb | ACI62_gt003-ACI62_gt004 (82.2) | 269 | 95 | View |
| Salix | Salicaceae | Malpighiales | 59 | 155–160 kb | petA-psbJ (63.3) | 258 | 100 | View |
| Salmonopuntia | Cactaceae | Caryophyllales | 2 | 147–148 kb | atpA-atpF (82.2) | 264 | 75 | View |
| Salsola | Amaranthaceae | Caryophyllales | 9 | 151–153 kb | rps4-trnT-UGU (78.9) | 270 | 75 | View |
| Salvia | Lamiaceae | Lamiales | 105 | 151–152 kb | rpl32-trnL-UAG (78.0) | 274 | 90 | View |
| Salvinia | Salviniaceae | Salviniales | 2 | 150–151 kb | tRNA-Glu-tRNA-Cys (86.2) | 91 | 70 | View |
| Sambucus | Adoxaceae | Dipsacales | 10 | 158–159 kb | trnN-GUU-nad5 (88.7) | 248 | 85 | View |
| Sanguisorba | Rosaceae | Rosales | 12 | 154–156 kb | trnT-UGU-trnL-UAA (80.3) | 269 | 105 | View |
| Sanicula | Apiaceae | Apiales | 21 | 154–156 kb | trnH(GTG)-psbA (74.0) | 269 | 95 | View |
| Sansevieria | Asparagaceae | Asparagales | 4 | 155–155 kb | infA-rps8 (62.1) | 276 | 85 | View |
| Santalum | Santalaceae | Santalales | 10 | 144–144 kb | trnH-GUG-psbA (75.9) | 253 | 100 | View |
| Sapindus | Sapindaceae | Sapindales | 3 | 160–160 kb | psbE-petL (61.9) | 268 | 100 | View |
| Saraca | Fabaceae | Fabales | 2 | 160–160 kb | atpH-atpI (83.9) | 270 | 100 | View |
| Saracha | Solanaceae | Solanales | 2 | 157–157 kb | rps19-rpl23 (97.5) | 275 | 95 | View |
| Sarcandra | Chloranthaceae | Chloranthales | 2 | 159–159 kb | psbT-psbN (87.5) | 267 | 80 | View |
| Sarcopyramis | Melastomataceae | Myrtales | 2 | 153–153 kb | psbT-psbN (83.3) | 262 | 100 | View |
| Sargassum | Sargassaceae | Fucales | 13 | 124–125 kb | chlI-trnF-GAA (84.8) | 341 | 90 | View |
| Sarmentypnum | Amblystegiaceae | Hypnales | 2 | 125–125 kb | trnS-GCU-psbI (62.6) | 260 | 90 | View |
| Sarracenia | Sarraceniaceae | Ericales | 2 | 155–160 kb | rps15-ndhI (70.8) | 265 | 55 | View |
| Sartidia | Poaceae | Poales | 3 | 138–139 kb | ndhC-trnV-UAC (63.4) | 265 | 100 | View |
| Sasa | Poaceae | Poales | 4 | 140–140 kb | rpoC2-rps2 (77.3) | 272 | 90 | View |
| Sasaella | Poaceae | Poales | 2 | 139–140 kb | psbT-psbN (87.5) | 283 | 105 | View |
| Sasamorpha | Poaceae | Poales | 3 | 139–140 kb | psbT-psbN (75.0) | 276 | 95 | View |
| Sassafras | Lauraceae | Laurales | 3 | 152–153 kb | petA-psbJ (86.9) | 263 | 85 | View |
| Satureja | Lamiaceae | Lamiales | 2 | 152–152 kb | trnG-GCC-trnM-CAU (78.7) | 274 | 105 | View |
| Saurauia | Actinidiaceae | Ericales | 2 | 157–157 kb | trnG (UCC)-trnR (UCU) (73.0) | 268 | 100 | View |
| Saururus | Saururaceae | Piperales | 2 | 161–162 kb | ccsA (82.1) | 274 | 80 | View |
| Saussurea | Asteraceae | Asterales | 24 | 152–153 kb | rpl32-trnL-UAG (73.6) | 257 | 80 | View |
| Saxifraga | Saxifragaceae | Saxifragales | 116 | 146–156 kb | atpH-atpI (88.6) | 268 | 105 | View |
| Scabiosa | Caprifoliaceae | Dipsacales | 2 | 158–160 kb | psbE-petL (91.0) | 274 | 80 | View |
| Scapania | Scapaniaceae | Jungermanniales | 2 | 118–118 kb | rpl32-trnL-UAG (83.2) | 267 | 65 | View |
| Schima | Theaceae | Ericales | 14 | 157–157 kb | petA-psbJ (60.4) | 273 | 115 | View |
| Schisandra | Schisandraceae | Austrobaileyales | 6 | 145–147 kb | trnD-GTC-trnY-GTA (82.9) | 231 | 85 | View |
| Schizachne | Poaceae | Poales | 2 | 136–136 kb | rps3-rpl22 (72.7) | 257 | 100 | View |
| Schizachyrium | Poaceae | Poales | 40 | 138–140 kb | trnG-UCC-trnT-GGU (72.0) | 265 | 95 | View |
2112 genera